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sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-58 Sentence denotes Urea cycle disorders in Thai infants: a report of 5 cases.
TextSentencer_T2 59-244 Sentence denotes Urea Cycle Disorders (UCD) is an inborn error of urea synthesis in which ammonium and other nitrogenous precursors of urea accumulate leading to episodic coma and a high mortality rate.
TextSentencer_T3 245-357 Sentence denotes Therapy with peritoneal dialysis, essential amino acids or their nitrogen-free analogues has increased survival.
TextSentencer_T4 358-474 Sentence denotes The authors report 5 cases of urea cycle disorders, all of whom developed and were rescued from hyperammonemic coma.
TextSentencer_T5 475-524 Sentence denotes However, the eventual outcome was quite variable.
TextSentencer_T6 525-573 Sentence denotes Argininosuccinate lyase deficiency (ALD) Case 1.
TextSentencer_T7 574-797 Sentence denotes A 2 month old male infant, a product of a consanguineous marriage (Suphanburi province); developed poor feeding on day 7, lethargy, convulsion, hepatomegaly and respiratory alkalosis leading to respiratory failure and coma.
TextSentencer_T8 798-917 Sentence denotes Hyperammonemia, elevation of glutamic acid and argininosuccinic acid and its anhydrides confirmed the diagnosis of ALD.
TextSentencer_T9 918-962 Sentence denotes He is now 9 years old and severely retarded.
TextSentencer_T10 963-970 Sentence denotes Case 2.
TextSentencer_T11 971-1260 Sentence denotes A male infant with history of lethargy, poor feeding on day 3, treated as sepsis and required respiratory support for 6 days; subsequently readmitted at age 2 weeks with vomitting, lethargy, seizure activity and hyperammonemia, and was treated by a local pediatrician in Songkhla province.
TextSentencer_T12 1261-1481 Sentence denotes There was a history of parental consanguinity and he was referred to Siriraj Hospital on day 64 with severe essential amino acid deficiency and acrodermatitis enteropathica with markedly elevated plasma citrulline level.
TextSentencer_T13 1482-1570 Sentence denotes In spite of aggressive treatment; the patient developed sepsis and he expired on day 78.
TextSentencer_T14 1571-1622 Sentence denotes Ornithine transcarbamylase deficiency (OTC) Case 3.
TextSentencer_T15 1623-1821 Sentence denotes An eleven-month-old male infant, the product of a non-consanguineous marriage, developed neonatal onset of hyperammonemia on day 5 after poor feeding, lethargy, hypothermia, seizure, apnea and coma.
TextSentencer_T16 1822-1970 Sentence denotes He was rescued from neonatal hyperammonemic coma on day 9 after aggressive treatment, but expired at eleven months of age after overwhelming sepsis.
TextSentencer_T17 1971-1978 Sentence denotes Case 4.
TextSentencer_T18 1979-2083 Sentence denotes A male infant, sibling of case 3 was referred to Siriraj Hospital on day 8 with hyperammonemia and coma.
TextSentencer_T19 2084-2248 Sentence denotes In spite of intensive genetic counseling given after the birth of their first child with OTC, the couple chose to have another baby without informing any physician.
TextSentencer_T20 2249-2338 Sentence denotes The baby developed vomiting and lethargy on day 2; subsequently hyperammonemia was noted.
TextSentencer_T21 2339-2484 Sentence denotes In spite of aggressive treatment given; hepatic dysfunction, renal failure and disseminated intravascular coagulation defects occurred on day 15.
TextSentencer_T22 2485-2569 Sentence denotes He expired on day 18 after parental permission for discontinuation of all treatment.
TextSentencer_T23 2570-2633 Sentence denotes Argininosuccinate synthetase deficiency (ASS) or Citrullinemia.
TextSentencer_T24 2634-2641 Sentence denotes Case 5.
TextSentencer_T25 2642-2790 Sentence denotes A seven week old female infant, the product of a consanguineous marriage and of Pakistani ethnic origin; developed intermittent vomiting from day 6.
TextSentencer_T26 2791-3042 Sentence denotes Initial diagnoses included ruminations, sepsis and pyloric stenosis for which she was operated on (day 30); however, vomiting continued; subsequently seizures, hyperammonemic coma developed and she was rescued from hyperammonemic coma within 30 hours.
TextSentencer_T27 3043-3114 Sentence denotes Significant elevations of citrulline and L-glutamine were demonstrated.
TextSentencer_T28 3115-3204 Sentence denotes She was discharged in excellent condition to her home in Dubai, the United Arab Emirates.
T1 0-58 Sentence denotes Urea cycle disorders in Thai infants: a report of 5 cases.
T2 59-244 Sentence denotes Urea Cycle Disorders (UCD) is an inborn error of urea synthesis in which ammonium and other nitrogenous precursors of urea accumulate leading to episodic coma and a high mortality rate.
T3 245-357 Sentence denotes Therapy with peritoneal dialysis, essential amino acids or their nitrogen-free analogues has increased survival.
T4 358-474 Sentence denotes The authors report 5 cases of urea cycle disorders, all of whom developed and were rescued from hyperammonemic coma.
T5 475-524 Sentence denotes However, the eventual outcome was quite variable.
T6 525-573 Sentence denotes Argininosuccinate lyase deficiency (ALD) Case 1.
T7 574-797 Sentence denotes A 2 month old male infant, a product of a consanguineous marriage (Suphanburi province); developed poor feeding on day 7, lethargy, convulsion, hepatomegaly and respiratory alkalosis leading to respiratory failure and coma.
T8 798-917 Sentence denotes Hyperammonemia, elevation of glutamic acid and argininosuccinic acid and its anhydrides confirmed the diagnosis of ALD.
T9 918-962 Sentence denotes He is now 9 years old and severely retarded.
T10 963-970 Sentence denotes Case 2.
T11 971-1260 Sentence denotes A male infant with history of lethargy, poor feeding on day 3, treated as sepsis and required respiratory support for 6 days; subsequently readmitted at age 2 weeks with vomitting, lethargy, seizure activity and hyperammonemia, and was treated by a local pediatrician in Songkhla province.
T12 1261-1481 Sentence denotes There was a history of parental consanguinity and he was referred to Siriraj Hospital on day 64 with severe essential amino acid deficiency and acrodermatitis enteropathica with markedly elevated plasma citrulline level.
T13 1482-1570 Sentence denotes In spite of aggressive treatment; the patient developed sepsis and he expired on day 78.
T14 1571-1622 Sentence denotes Ornithine transcarbamylase deficiency (OTC) Case 3.
T15 1623-1821 Sentence denotes An eleven-month-old male infant, the product of a non-consanguineous marriage, developed neonatal onset of hyperammonemia on day 5 after poor feeding, lethargy, hypothermia, seizure, apnea and coma.
T16 1822-1970 Sentence denotes He was rescued from neonatal hyperammonemic coma on day 9 after aggressive treatment, but expired at eleven months of age after overwhelming sepsis.
T17 1971-1978 Sentence denotes Case 4.
T18 1979-2083 Sentence denotes A male infant, sibling of case 3 was referred to Siriraj Hospital on day 8 with hyperammonemia and coma.
T19 2084-2248 Sentence denotes In spite of intensive genetic counseling given after the birth of their first child with OTC, the couple chose to have another baby without informing any physician.
T20 2249-2338 Sentence denotes The baby developed vomiting and lethargy on day 2; subsequently hyperammonemia was noted.
T21 2339-2484 Sentence denotes In spite of aggressive treatment given; hepatic dysfunction, renal failure and disseminated intravascular coagulation defects occurred on day 15.
T22 2485-2569 Sentence denotes He expired on day 18 after parental permission for discontinuation of all treatment.
T23 2570-2633 Sentence denotes Argininosuccinate synthetase deficiency (ASS) or Citrullinemia.
T24 2634-2641 Sentence denotes Case 5.
T25 2642-2790 Sentence denotes A seven week old female infant, the product of a consanguineous marriage and of Pakistani ethnic origin; developed intermittent vomiting from day 6.
T26 2791-3042 Sentence denotes Initial diagnoses included ruminations, sepsis and pyloric stenosis for which she was operated on (day 30); however, vomiting continued; subsequently seizures, hyperammonemic coma developed and she was rescued from hyperammonemic coma within 30 hours.
T27 3043-3114 Sentence denotes Significant elevations of citrulline and L-glutamine were demonstrated.
T28 3115-3204 Sentence denotes She was discharged in excellent condition to her home in Dubai, the United Arab Emirates.

PubCasesHPO

Id Subject Object Predicate Lexical cue
AB1 213-217 HP:0001259 denotes coma
AB2 469-473 HP:0001259 denotes coma
AB3 696-704 HP:0001254 denotes lethargy
AB4 718-730 HP:0002240 denotes hepatomegaly
AB5 735-756 HP:0001950 denotes respiratory alkalosis
AB6 768-787 HP:0002878 denotes respiratory failure
AB7 792-796 HP:0001259 denotes coma
AB8 798-812 HP:0001987 denotes Hyperammonemia
AB9 1001-1009 HP:0001254 denotes lethargy
AB10 1045-1051 HP:0100806 denotes sepsis
AB11 1141-1150 HP:0002013 denotes vomitting
AB12 1152-1160 HP:0001254 denotes lethargy
AB13 1162-1169 HP:0001250 denotes seizure
AB14 1183-1197 HP:0001987 denotes hyperammonemia
AB15 1448-1474 HP:0011966 denotes elevated plasma citrulline
AB16 1538-1544 HP:0100806 denotes sepsis
AB17 1730-1744 HP:0001987 denotes hyperammonemia
AB18 1774-1782 HP:0001254 denotes lethargy
AB19 1784-1795 HP:0002045 denotes hypothermia
AB20 1797-1804 HP:0001250 denotes seizure
AB21 1806-1811 HP:0002104 denotes apnea
AB22 1816-1820 HP:0001259 denotes coma
AB23 1866-1870 HP:0001259 denotes coma
AB24 1963-1969 HP:0100806 denotes sepsis
AB25 2059-2073 HP:0001987 denotes hyperammonemia
AB26 2078-2082 HP:0001259 denotes coma
AB27 2268-2276 HP:0002013 denotes vomiting
AB28 2281-2289 HP:0001254 denotes lethargy
AB29 2313-2327 HP:0001987 denotes hyperammonemia
AB30 2418-2456 HP:0005521 denotes disseminated intravascular coagulation
AB31 2770-2778 HP:0002013 denotes vomiting
AB32 2831-2837 HP:0100806 denotes sepsis
AB33 2842-2858 HP:0002021 denotes pyloric stenosis
AB34 2908-2916 HP:0002013 denotes vomiting
AB35 2941-2949 HP:0001250 denotes seizures
AB36 2966-2970 HP:0001259 denotes coma
AB37 3021-3025 HP:0001259 denotes coma

UBERON-AE

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 1141-1150 http://purl.obolibrary.org/obo/UBERON_0000172 denotes vomitting
PD-UBERON-AE-B_T2 2268-2276 http://purl.obolibrary.org/obo/UBERON_0000172 denotes vomiting
PD-UBERON-AE-B_T3 2770-2778 http://purl.obolibrary.org/obo/UBERON_0000172 denotes vomiting
PD-UBERON-AE-B_T4 2908-2916 http://purl.obolibrary.org/obo/UBERON_0000172 denotes vomiting

PubCasesORDO

Id Subject Object Predicate Lexical cue
AB1 1405-1433 ORDO:37 denotes acrodermatitis enteropathica
AB2 1571-1608 ORDO:664 denotes Ornithine transcarbamylase deficiency
AB3 2570-2609 ORDO:247525 denotes Argininosuccinate synthetase deficiency

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 1141-1150 http://purl.obolibrary.org/obo/UBERON_0000172 denotes vomitting
PD-UBERON-AE-B_T2 2268-2276 http://purl.obolibrary.org/obo/UBERON_0000172 denotes vomiting
PD-UBERON-AE-B_T3 2770-2778 http://purl.obolibrary.org/obo/UBERON_0000172 denotes vomiting
PD-UBERON-AE-B_T4 2908-2916 http://purl.obolibrary.org/obo/UBERON_0000172 denotes vomiting