PubMed:12399021
Annnotations
NGLY1-deficiency
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-NGLY1-deficiency-B_T1 | 26-32 | chem:24139 | denotes | GlcNAc |
| PD-NGLY1-deficiency-B_T2 | 175-194 | chem:24139 | denotes | N-acetylglucosamine |
| PD-NGLY1-deficiency-B_T3 | 450-456 | chem:24139 | denotes | GlcNAc |
| PD-NGLY1-deficiency-B_T4 | 474-480 | chem:24139 | denotes | GlcNAc |
| PD-NGLY1-deficiency-B_T5 | 599-605 | chem:24139 | denotes | GlcNAc |
| PD-NGLY1-deficiency-B_T6 | 793-799 | chem:24139 | denotes | GlcNAc |
| PD-NGLY1-deficiency-B_T7 | 1053-1059 | chem:24139 | denotes | GlcNAc |
| PD-NGLY1-deficiency-B_T8 | 1124-1130 | chem:24139 | denotes | GlcNAc |
| PD-NGLY1-deficiency-B_T9 | 1226-1232 | chem:24139 | denotes | GlcNAc |
| PD-NGLY1-deficiency-B_T10 | 1517-1523 | chem:24139 | denotes | GlcNAc |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 24-32 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T2 | 448-456 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T3 | 472-480 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T4 | 597-605 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T5 | 791-799 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T6 | 1051-1059 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T7 | 1122-1130 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T8 | 1224-1232 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T9 | 1515-1523 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
GlyCosmos15-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 57-71 | OrganismTaxon | denotes | Xenopus laevis | 8355 |
| T2 | 292-306 | OrganismTaxon | denotes | Xenopus laevis | 8355 |
GlyCosmos15-CL
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 72-78 | Cell | denotes | oocyte | http://purl.obolibrary.org/obo/CL:0000023 |
| T2 | 307-314 | Cell | denotes | oocytes | http://purl.obolibrary.org/obo/CL:0000023 |
| T3 | 867-873 | Cell | denotes | oocyte | http://purl.obolibrary.org/obo/CL:0000023 |
| T4 | 984-991 | Cell | denotes | oocytes | http://purl.obolibrary.org/obo/CL:0000023 |
| T5 | 1150-1157 | Cell | denotes | oocytes | http://purl.obolibrary.org/obo/CL:0000023 |
| T6 | 1411-1418 | Cell | denotes | oocytes | http://purl.obolibrary.org/obo/CL:0000023 |
| T7 | 1629-1636 | Cell | denotes | oocytes | http://purl.obolibrary.org/obo/CL:0000023 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 72-78 | Body_part | denotes | oocyte | http://purl.obolibrary.org/obo/CL_0000023 |
| T2 | 867-873 | Body_part | denotes | oocyte | http://purl.obolibrary.org/obo/CL_0000023 |
| T3 | 1592-1605 | Body_part | denotes | cell division | http://purl.obolibrary.org/obo/UBERON_2000098 |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-135 | Sentence | denotes | Characterization of the O-GlcNAc protein modification in Xenopus laevis oocyte during oogenesis and progesterone-stimulated maturation. |
| T2 | 136-263 | Sentence | denotes | Little information exists about single N-acetylglucosamine modifications on proteins in growth and developmental model systems. |
| T3 | 264-393 | Sentence | denotes | To explore these phenomena, Xenopus laevis oocytes from stages I-VI of oogenesis were isolated and proteins analyzed on SDS-PAGE. |
| T4 | 394-457 | Sentence | denotes | The proteins were probed with antibodies specific for O-GlcNAc. |
| T5 | 458-569 | Sentence | denotes | Levels of the O-GlcNAc protein modification were highest in stages I and II, while decreasing in stages III-VI. |
| T6 | 570-786 | Sentence | denotes | The reduction in amount of O-GlcNAc-modified proteins was correlated to increases in apparent O-GlcNAcase (streptozotocin-inhibitable neutral hexosaminidase), activity involved in removing protein monoglycosylations. |
| T7 | 787-885 | Sentence | denotes | The O-GlcNAc modification was also characterized during progesterone-stimulated oocyte maturation. |
| T8 | 886-1091 | Sentence | denotes | Although O-GlcNAcase activity appeared relatively constant between quiescent and matured stage VI oocytes, a small decrease in the levels of both total and specific O-GlcNAc-modified proteins was observed. |
| T9 | 1092-1284 | Sentence | denotes | Investigating the function of O-GlcNAc during maturation, oocytes were incubated with compounds known to modulate the levels of the O-GlcNAc protein modification and then stimulated to mature. |
| T10 | 1285-1510 | Sentence | denotes | Oocytes treated with compounds known to increase O-glycosylation consistently matured slower than non-treated controls, while oocytes treated with compounds that decrease O-glycosylation matured slightly faster than controls. |
| T11 | 1511-1637 | Sentence | denotes | The O-GlcNAc modification may play important roles in both the developmental and cell division processes of X. laevis oocytes. |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 24-32 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T2 | 448-456 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T3 | 472-480 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T4 | 597-605 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T5 | 791-799 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T6 | 1051-1059 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T7 | 1122-1130 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T8 | 1224-1232 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T9 | 1515-1523 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 24-32 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T2 | 448-456 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T3 | 472-480 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T4 | 597-605 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T5 | 791-799 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T6 | 1051-1059 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T7 | 1122-1130 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T8 | 1224-1232 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
| T9 | 1515-1523 | Glycan | denotes | O-GlcNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO |
GlyCosmos15-FMA
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 72-78 | Body_part | denotes | oocyte | FMA:18644 |
| T2 | 307-314 | Body_part | denotes | oocytes | FMA:18644 |
| T3 | 867-873 | Body_part | denotes | oocyte | FMA:18644 |
| T4 | 984-991 | Body_part | denotes | oocytes | FMA:18644 |
| T5 | 1150-1157 | Body_part | denotes | oocytes | FMA:18644 |
| T6 | 1285-1292 | Body_part | denotes | Oocytes | FMA:18644 |
| T7 | 1411-1418 | Body_part | denotes | oocytes | FMA:18644 |
| T8 | 1574-1596 | Body_part | denotes | developmental and cell | FMA:293065 |
| T9 | 1629-1636 | Body_part | denotes | oocytes | FMA:18644 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 57-71 | OrganismTaxon | denotes | Xenopus laevis | 8355 |
| T2 | 292-306 | OrganismTaxon | denotes | Xenopus laevis | 8355 |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 24-32 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T2 | 448-456 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T3 | 472-480 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T4 | 597-605 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T5 | 791-799 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T6 | 1051-1059 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T7 | 1122-1130 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T8 | 1224-1232 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
| T9 | 1515-1523 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | O-GlcNAc | http://www.glycoepitope.jp/epitopes/EP0004 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 72-78 | Body_part | denotes | oocyte | http://purl.obolibrary.org/obo/CL_0000023 |
| T2 | 867-873 | Body_part | denotes | oocyte | http://purl.obolibrary.org/obo/CL_0000023 |
| T3 | 1592-1605 | Body_part | denotes | cell division | http://purl.obolibrary.org/obo/UBERON_2000098 |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 72-78 | Cell | denotes | oocyte | http://purl.obolibrary.org/obo/CL:0000023 |
| T2 | 307-314 | Cell | denotes | oocytes | http://purl.obolibrary.org/obo/CL:0000023 |
| T3 | 867-873 | Cell | denotes | oocyte | http://purl.obolibrary.org/obo/CL:0000023 |
| T4 | 984-991 | Cell | denotes | oocytes | http://purl.obolibrary.org/obo/CL:0000023 |
| T5 | 1150-1157 | Cell | denotes | oocytes | http://purl.obolibrary.org/obo/CL:0000023 |
| T6 | 1411-1418 | Cell | denotes | oocytes | http://purl.obolibrary.org/obo/CL:0000023 |
| T7 | 1629-1636 | Cell | denotes | oocytes | http://purl.obolibrary.org/obo/CL:0000023 |