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PubMed:12361956 JSONTXT

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GGDB-2020

Id Subject Object Predicate Lexical cue
T1 112-120 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T2 251-266 https://acgg.asia/db/ggdb/info/gg075 denotes core 1 synthase
T3 270-278 https://acgg.asia/db/ggdb/info/gg075 denotes C1Gal-T1
T4 403-418 https://acgg.asia/db/ggdb/info/gg075 denotes core 1 synthase
T5 460-468 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T6 505-513 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T7 538-546 https://acgg.asia/db/ggdb/info/gg075 denotes C1Gal-T1
T8 660-668 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T9 843-858 https://acgg.asia/db/ggdb/info/gg075 denotes core 1 synthase
T10 902-910 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T11 1141-1149 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T12 1246-1254 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T13 1312-1327 https://acgg.asia/db/ggdb/info/gg075 denotes core 1 synthase
T14 1373-1381 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T15 1412-1420 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T16 1449-1464 https://acgg.asia/db/ggdb/info/gg075 denotes core 1 synthase

ggdb-test

Id Subject Object Predicate Lexical cue
T1 112-120 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T2 251-266 https://acgg.asia/db/ggdb/info/gg075 denotes core 1 synthase
T3 270-278 https://acgg.asia/db/ggdb/info/gg075 denotes C1Gal-T1
T4 403-418 https://acgg.asia/db/ggdb/info/gg075 denotes core 1 synthase
T5 460-468 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T6 505-513 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T7 538-546 https://acgg.asia/db/ggdb/info/gg075 denotes C1Gal-T1
T8 660-668 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T9 843-858 https://acgg.asia/db/ggdb/info/gg075 denotes core 1 synthase
T10 902-910 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T11 1141-1149 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T12 1246-1254 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T13 1312-1327 https://acgg.asia/db/ggdb/info/gg075 denotes core 1 synthase
T14 1373-1381 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T15 1412-1420 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
T16 1449-1464 https://acgg.asia/db/ggdb/info/gg075 denotes core 1 synthase

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 148-154 Glycan_Motif denotes core 1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00031MO
T2 251-257 Glycan_Motif denotes core 1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00031MO
T3 403-409 Glycan_Motif denotes core 1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00031MO
T4 843-849 Glycan_Motif denotes core 1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00031MO
T5 1087-1093 Glycan_Motif denotes core 1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00031MO
T6 1109-1115 Glycan_Motif denotes core 1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00031MO
T7 1312-1318 Glycan_Motif denotes core 1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00031MO
T8 1449-1455 Glycan_Motif denotes core 1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00031MO

sentences

Id Subject Object Predicate Lexical cue
T1 0-177 Sentence denotes Molecular cloning and characterization of a novel UDP-Gal:GalNAc(alpha) peptide beta 1,3-galactosyltransferase (C1Gal-T2), an enzyme synthesizing a core 1 structure of O-glycan.
T2 178-367 Sentence denotes Recently, a UDP-Gal:GalNAc(alpha) peptide beta1,3-galactosyltransferase (core 1 synthase 1; C1Gal-T1) has been purified from rat liver and its complementary DNA cloned from several species.
T3 368-469 Sentence denotes We isolated a second candidate for core 1 synthase from a Colo205 cDNA library and named it C1Gal-T2.
T4 470-604 Sentence denotes The deduced amino acid sequence of C1Gal-T2, having 26% homology to C1Gal-T1, showed a topology typical of a type II membrane protein.
T5 605-821 Sentence denotes Real time PCR analysis revealed that the expression of C1Gal-T2 transcripts was widespread in many tissues and of relatively high level in salivary gland, stomach, small intestine, kidney, testis, thymus, and spleen.
T6 822-916 Sentence denotes LSC cells, having no core 1 synthase activity, were transfected stably with the C1Gal-T2 gene.
T7 917-1104 Sentence denotes Their microsome fraction showed beta1,3-galactosyltransferase activity toward GalNAc-alpha-para-nitrophenyl and GalNAc(alpha)1 peptides resulting in the synthesis of the core 1 structure.
T8 1105-1255 Sentence denotes The core 1 synthesizing activity of C1Gal-T2 was also determined by flow cytometry and lectin blotting using the LSC cells stably expressing C1Gal-T2.
T9 1256-1382 Sentence denotes Finally, LSC cells, and Jurkat cells that also lack the core 1 synthase activity, were found to have null alleles of C1Gal-T2.
T10 1383-1540 Sentence denotes These results indicated that C1Gal-T2 is the second candidate for core 1 synthase that plays an important role in synthesizing O-glycans in digestive organs.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 148-154 https://glytoucan.org/Structures/Glycans/G00031MO denotes core 1
T2 251-257 https://glytoucan.org/Structures/Glycans/G00031MO denotes core 1
T3 403-409 https://glytoucan.org/Structures/Glycans/G00031MO denotes core 1
T4 843-849 https://glytoucan.org/Structures/Glycans/G00031MO denotes core 1
T5 1087-1093 https://glytoucan.org/Structures/Glycans/G00031MO denotes core 1
T6 1109-1115 https://glytoucan.org/Structures/Glycans/G00031MO denotes core 1
T7 1312-1318 https://glytoucan.org/Structures/Glycans/G00031MO denotes core 1
T8 1449-1455 https://glytoucan.org/Structures/Glycans/G00031MO denotes core 1

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 307-312 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver
T2 744-758 http://purl.obolibrary.org/obo/MAT_0000079 denotes salivary gland
T3 753-758 http://purl.obolibrary.org/obo/MAT_0000021 denotes gland
T4 760-767 http://purl.obolibrary.org/obo/MAT_0000051 denotes stomach
T5 769-784 http://purl.obolibrary.org/obo/MAT_0000047 denotes small intestine
T6 775-784 http://purl.obolibrary.org/obo/MAT_0000043 denotes intestine
T7 786-792 http://purl.obolibrary.org/obo/MAT_0000119 denotes kidney
T8 794-800 http://purl.obolibrary.org/obo/MAT_0000132 denotes testis
T9 802-808 http://purl.obolibrary.org/obo/MAT_0000080 denotes thymus
T10 814-820 http://purl.obolibrary.org/obo/MAT_0000085 denotes spleen

glycogenes

Id Subject Object Predicate Lexical cue
PD-GlycoGenes20190927-B_T1 112-120 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
PD-GlycoGenes20190927-B_T2 270-278 https://acgg.asia/db/ggdb/info/gg075 denotes C1Gal-T1
PD-GlycoGenes20190927-B_T3 280-283 https://acgg.asia/db/ggdb/info/gg135 denotes has
PD-GlycoGenes20190927-B_T4 460-468 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
PD-GlycoGenes20190927-B_T5 505-513 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
PD-GlycoGenes20190927-B_T6 538-546 https://acgg.asia/db/ggdb/info/gg075 denotes C1Gal-T1
PD-GlycoGenes20190927-B_T7 584-586 https://acgg.asia/db/ggdb/info/gg111 denotes II
PD-GlycoGenes20190927-B_T8 660-668 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
PD-GlycoGenes20190927-B_T9 902-910 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
PD-GlycoGenes20190927-B_T10 1141-1149 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
PD-GlycoGenes20190927-B_T11 1246-1254 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
PD-GlycoGenes20190927-B_T12 1373-1381 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2
PD-GlycoGenes20190927-B_T13 1412-1420 https://acgg.asia/db/ggdb/info/gg076 denotes C1Gal-T2

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 148-154 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T2 251-257 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T3 403-409 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T4 843-849 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T5 995-1001 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T6 1029-1035 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T7 1087-1093 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T8 1109-1115 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T9 1312-1318 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T10 1449-1455 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO

GlyCosmos15-NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 303-306 OrganismTaxon denotes rat 10114|10116
T3 802-808 OrganismTaxon denotes thymus 49990

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 307-312 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T2 587-595 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T5 744-758 Body_part denotes salivary gland http://purl.obolibrary.org/obo/UBERON_0001044
T6 760-767 Body_part denotes stomach http://purl.obolibrary.org/obo/UBERON_0000945
T7 769-784 Body_part denotes small intestine http://purl.obolibrary.org/obo/UBERON_0002108
T8 786-792 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T9 794-800 Body_part denotes testis http://purl.obolibrary.org/obo/UBERON_0000473
T10 802-808 Body_part denotes thymus http://purl.obolibrary.org/obo/UBERON_0002370
T11 814-820 Body_part denotes spleen http://purl.obolibrary.org/obo/UBERON_0002106
T12 1523-1539 Body_part denotes digestive organs http://purl.obolibrary.org/obo/UBERON_0013765

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 307-312 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097
T2 744-758 Body_part denotes salivary gland http://purl.obolibrary.org/obo/MAT_0000079
T3 760-767 Body_part denotes stomach http://purl.obolibrary.org/obo/MAT_0000051
T4 769-784 Body_part denotes small intestine http://purl.obolibrary.org/obo/MAT_0000047
T5 786-792 Body_part denotes kidney http://purl.obolibrary.org/obo/MAT_0000119
T6 794-800 Body_part denotes testis http://purl.obolibrary.org/obo/MAT_0000132
T7 802-808 Body_part denotes thymus http://purl.obolibrary.org/obo/MAT_0000080
T8 814-820 Body_part denotes spleen http://purl.obolibrary.org/obo/MAT_0000085

sentences

Id Subject Object Predicate Lexical cue
T1 0-177 Sentence denotes Molecular cloning and characterization of a novel UDP-Gal:GalNAc(alpha) peptide beta 1,3-galactosyltransferase (C1Gal-T2), an enzyme synthesizing a core 1 structure of O-glycan.
T2 178-367 Sentence denotes Recently, a UDP-Gal:GalNAc(alpha) peptide beta1,3-galactosyltransferase (core 1 synthase 1; C1Gal-T1) has been purified from rat liver and its complementary DNA cloned from several species.
T3 368-469 Sentence denotes We isolated a second candidate for core 1 synthase from a Colo205 cDNA library and named it C1Gal-T2.
T4 470-604 Sentence denotes The deduced amino acid sequence of C1Gal-T2, having 26% homology to C1Gal-T1, showed a topology typical of a type II membrane protein.
T5 605-821 Sentence denotes Real time PCR analysis revealed that the expression of C1Gal-T2 transcripts was widespread in many tissues and of relatively high level in salivary gland, stomach, small intestine, kidney, testis, thymus, and spleen.
T6 822-916 Sentence denotes LSC cells, having no core 1 synthase activity, were transfected stably with the C1Gal-T2 gene.
T7 917-1104 Sentence denotes Their microsome fraction showed beta1,3-galactosyltransferase activity toward GalNAc-alpha-para-nitrophenyl and GalNAc(alpha)1 peptides resulting in the synthesis of the core 1 structure.
T8 1105-1255 Sentence denotes The core 1 synthesizing activity of C1Gal-T2 was also determined by flow cytometry and lectin blotting using the LSC cells stably expressing C1Gal-T2.
T9 1256-1382 Sentence denotes Finally, LSC cells, and Jurkat cells that also lack the core 1 synthase activity, were found to have null alleles of C1Gal-T2.
T10 1383-1540 Sentence denotes These results indicated that C1Gal-T2 is the second candidate for core 1 synthase that plays an important role in synthesizing O-glycans in digestive organs.

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-177 Sentence denotes Molecular cloning and characterization of a novel UDP-Gal:GalNAc(alpha) peptide beta 1,3-galactosyltransferase (C1Gal-T2), an enzyme synthesizing a core 1 structure of O-glycan.
T2 178-367 Sentence denotes Recently, a UDP-Gal:GalNAc(alpha) peptide beta1,3-galactosyltransferase (core 1 synthase 1; C1Gal-T1) has been purified from rat liver and its complementary DNA cloned from several species.
T3 368-469 Sentence denotes We isolated a second candidate for core 1 synthase from a Colo205 cDNA library and named it C1Gal-T2.
T4 470-604 Sentence denotes The deduced amino acid sequence of C1Gal-T2, having 26% homology to C1Gal-T1, showed a topology typical of a type II membrane protein.
T5 605-821 Sentence denotes Real time PCR analysis revealed that the expression of C1Gal-T2 transcripts was widespread in many tissues and of relatively high level in salivary gland, stomach, small intestine, kidney, testis, thymus, and spleen.
T6 822-916 Sentence denotes LSC cells, having no core 1 synthase activity, were transfected stably with the C1Gal-T2 gene.
T7 917-1104 Sentence denotes Their microsome fraction showed beta1,3-galactosyltransferase activity toward GalNAc-alpha-para-nitrophenyl and GalNAc(alpha)1 peptides resulting in the synthesis of the core 1 structure.
T8 1105-1255 Sentence denotes The core 1 synthesizing activity of C1Gal-T2 was also determined by flow cytometry and lectin blotting using the LSC cells stably expressing C1Gal-T2.
T9 1256-1382 Sentence denotes Finally, LSC cells, and Jurkat cells that also lack the core 1 synthase activity, were found to have null alleles of C1Gal-T2.
T10 1383-1540 Sentence denotes These results indicated that C1Gal-T2 is the second candidate for core 1 synthase that plays an important role in synthesizing O-glycans in digestive organs.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 148-154 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T2 251-257 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T3 403-409 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T4 843-849 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T5 995-1001 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T6 1029-1035 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T7 1087-1093 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T8 1109-1115 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T9 1312-1318 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T10 1449-1455 Glycan denotes core 1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO

Lectin-Jamboree-Sentence

Id Subject Object Predicate Lexical cue
T1 0-177 Sentence denotes Molecular cloning and characterization of a novel UDP-Gal:GalNAc(alpha) peptide beta 1,3-galactosyltransferase (C1Gal-T2), an enzyme synthesizing a core 1 structure of O-glycan.
T2 178-367 Sentence denotes Recently, a UDP-Gal:GalNAc(alpha) peptide beta1,3-galactosyltransferase (core 1 synthase 1; C1Gal-T1) has been purified from rat liver and its complementary DNA cloned from several species.
T3 368-469 Sentence denotes We isolated a second candidate for core 1 synthase from a Colo205 cDNA library and named it C1Gal-T2.
T4 470-604 Sentence denotes The deduced amino acid sequence of C1Gal-T2, having 26% homology to C1Gal-T1, showed a topology typical of a type II membrane protein.
T5 605-821 Sentence denotes Real time PCR analysis revealed that the expression of C1Gal-T2 transcripts was widespread in many tissues and of relatively high level in salivary gland, stomach, small intestine, kidney, testis, thymus, and spleen.
T6 822-916 Sentence denotes LSC cells, having no core 1 synthase activity, were transfected stably with the C1Gal-T2 gene.
T7 917-1104 Sentence denotes Their microsome fraction showed beta1,3-galactosyltransferase activity toward GalNAc-alpha-para-nitrophenyl and GalNAc(alpha)1 peptides resulting in the synthesis of the core 1 structure.
T8 1105-1255 Sentence denotes The core 1 synthesizing activity of C1Gal-T2 was also determined by flow cytometry and lectin blotting using the LSC cells stably expressing C1Gal-T2.
T9 1256-1382 Sentence denotes Finally, LSC cells, and Jurkat cells that also lack the core 1 synthase activity, were found to have null alleles of C1Gal-T2.
T10 1383-1540 Sentence denotes These results indicated that C1Gal-T2 is the second candidate for core 1 synthase that plays an important role in synthesizing O-glycans in digestive organs.

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 303-306 OrganismTaxon denotes rat 10114|10116
T3 802-808 OrganismTaxon denotes thymus 49990

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 307-312 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T2 587-595 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T5 744-758 Body_part denotes salivary gland http://purl.obolibrary.org/obo/UBERON_0001044
T6 760-767 Body_part denotes stomach http://purl.obolibrary.org/obo/UBERON_0000945
T7 769-784 Body_part denotes small intestine http://purl.obolibrary.org/obo/UBERON_0002108
T8 786-792 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T9 794-800 Body_part denotes testis http://purl.obolibrary.org/obo/UBERON_0000473
T10 802-808 Body_part denotes thymus http://purl.obolibrary.org/obo/UBERON_0002370
T11 814-820 Body_part denotes spleen http://purl.obolibrary.org/obo/UBERON_0002106
T12 1523-1539 Body_part denotes digestive organs http://purl.obolibrary.org/obo/UBERON_0013765

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 307-312 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097
T2 744-758 Body_part denotes salivary gland http://purl.obolibrary.org/obo/MAT_0000079
T3 760-767 Body_part denotes stomach http://purl.obolibrary.org/obo/MAT_0000051
T4 769-784 Body_part denotes small intestine http://purl.obolibrary.org/obo/MAT_0000047
T5 786-792 Body_part denotes kidney http://purl.obolibrary.org/obo/MAT_0000119
T6 794-800 Body_part denotes testis http://purl.obolibrary.org/obo/MAT_0000132
T7 802-808 Body_part denotes thymus http://purl.obolibrary.org/obo/MAT_0000080
T8 814-820 Body_part denotes spleen http://purl.obolibrary.org/obo/MAT_0000085