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PubMed:12237294 JSONTXT

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GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 537-553 Glycan_Motif denotes glucosylceramide https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G71142DF
T2 722-725 Glycan_Motif denotes GM1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI
T4 1013-1016 Glycan_Motif denotes GM3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH
T6 1091-1094 Glycan_Motif denotes GD3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G98544DH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81928IQ
T8 1099-1102 Glycan_Motif denotes GT3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G93899SO|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G33570YF
T10 1107-1110 Glycan_Motif denotes GM1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI
T12 1115-1119 Glycan_Motif denotes GD1a https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G69277LC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46677TE
T14 1131-1134 Glycan_Motif denotes GM2 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G79389NT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G61168WC
T16 1157-1160 Glycan_Motif denotes GM1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI
T18 1406-1409 Glycan_Motif denotes GM1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI
T20 1814-1817 Glycan_Motif denotes GM1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI

sentences

Id Subject Object Predicate Lexical cue
T1 0-149 Sentence denotes Effect of gangliosides on the distribution of a glycosylphosphatidylinositol-anchored protein in plasma membrane from Chinese hamster ovary-K1 cells.
T2 150-288 Sentence denotes Glycosylphosphatidylinositol (GPI)-anchored proteins are clustered mainly in sphingolipid-cholesterol microdomains of the plasma membrane.
T3 289-485 Sentence denotes The distribution of GPI-anchored fusion yellow fluorescent protein (GPI-YFP) in the plasma membrane of Chinese hamster ovary (CHO)-K1 cells with different glycolipid compositions was investigated.
T4 486-761 Sentence denotes Cells depleted of glycosphingolipids by inhibiting glucosylceramide synthase activity or cell lines expressing different gangliosides caused by stable transfection of appropriate ganglioside glycosyltransferases or exposed to exogenous GM1 were transfected with GPI-YFP cDNA.
T5 762-932 Sentence denotes The distribution of GPI-YFP fusion protein expressed at the plasma membrane was studied using the membrane-impermeable cross-linking agent bis(sulfosuccinimidyl)suberate.
T6 933-1161 Sentence denotes Results indicate that GPI-YFP forms clusters at the surface of cells expressing GM3, or cells depleted of glycolipids, or transfected cells expressing mainly GD3 and GT3, or GM1 and GD1a, or mostly GM2, or highly expressing GM1.
T7 1162-1341 Sentence denotes However, no significant changes in membrane microdomains of GPI-YFP were detected in the different glycolipid environments provided by the membranes of the cell lines under study.
T8 1342-1529 Sentence denotes On the other hand, wild type CHO-K1 cells exposed to 100 microm GM1 before cross-linking with bis(sulfosuccinimidyl)suberate showed a dramatic reduction in the amount of GPI-YFP clusters.
T9 1530-1789 Sentence denotes These findings clearly indicate that manipulating the glycolipid content of the cellular membrane, just by changing the ganglioside biosynthetic activity of the cell, did not significantly affect the association of GPI-YFP on the cell surface of CHO-K1 cells.
T10 1790-2073 Sentence denotes The effect of exogenous GM1 gangliosides on GPI-YFP plasma membrane distribution might be a consequence of the ganglioside level reached in plasma membrane and/or the effect of particular ganglioside species (micelles) that lead to membrane architecture and/or dynamic modifications.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 537-553 https://glytoucan.org/Structures/Glycans/G71142DF denotes glucosylceramide
T2 722-725 https://glytoucan.org/Structures/Glycans/G46613JI denotes GM1
T3 722-725 https://glytoucan.org/Structures/Glycans/G48558GR denotes GM1
T4 1013-1016 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T5 1013-1016 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T6 1091-1094 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T7 1091-1094 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T8 1099-1102 https://glytoucan.org/Structures/Glycans/G33570YF denotes GT3
T9 1099-1102 https://glytoucan.org/Structures/Glycans/G93899SO denotes GT3
T10 1107-1110 https://glytoucan.org/Structures/Glycans/G46613JI denotes GM1
T11 1107-1110 https://glytoucan.org/Structures/Glycans/G48558GR denotes GM1
T12 1115-1119 https://glytoucan.org/Structures/Glycans/G46677TE denotes GD1a
T13 1115-1119 https://glytoucan.org/Structures/Glycans/G69277LC denotes GD1a
T14 1131-1134 https://glytoucan.org/Structures/Glycans/G61168WC denotes GM2
T15 1131-1134 https://glytoucan.org/Structures/Glycans/G79389NT denotes GM2
T16 1157-1160 https://glytoucan.org/Structures/Glycans/G46613JI denotes GM1
T17 1157-1160 https://glytoucan.org/Structures/Glycans/G48558GR denotes GM1
T18 1406-1409 https://glytoucan.org/Structures/Glycans/G46613JI denotes GM1
T19 1406-1409 https://glytoucan.org/Structures/Glycans/G48558GR denotes GM1
T20 1814-1817 https://glytoucan.org/Structures/Glycans/G46613JI denotes GM1
T21 1814-1817 https://glytoucan.org/Structures/Glycans/G48558GR denotes GM1

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T1 722-725 http://www.glycoepitope.jp/epitopes/EP0050 denotes GM1
T2 1099-1102 http://www.glycoepitope.jp/epitopes/EP0070 denotes GT3
T3 1107-1110 http://www.glycoepitope.jp/epitopes/EP0050 denotes GM1
T4 1115-1119 http://www.glycoepitope.jp/epitopes/EP0056 denotes GD1a
T5 1157-1160 http://www.glycoepitope.jp/epitopes/EP0050 denotes GM1
T6 1406-1409 http://www.glycoepitope.jp/epitopes/EP0050 denotes GM1
T7 1814-1817 http://www.glycoepitope.jp/epitopes/EP0050 denotes GM1

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 1355-1359 http://purl.obolibrary.org/obo/MAT_0000091 denotes hand

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 722-725 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T2 1013-1016 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T3 1091-1094 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T4 1099-1102 Glycan denotes GT3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G93899SO
T5 1107-1110 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T6 1115-1119 Glycan denotes GD1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE
T7 1131-1134 Glycan denotes GM2 https://api.glycosmos.org/wurcs2image/latest/png/binary/G79389NT
T8 1157-1160 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T9 1406-1409 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T10 1814-1817 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 722-725 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T2 1099-1102 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT3 http://www.glycoepitope.jp/epitopes/EP0070
T3 1107-1110 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T4 1115-1119 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GD1a http://www.glycoepitope.jp/epitopes/EP0056
T5 1157-1160 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T6 1406-1409 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T7 1814-1817 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050

GlyCosmos15-NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 118-133 OrganismTaxon denotes Chinese hamster 10029
T2 392-407 OrganismTaxon denotes Chinese hamster 10029

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 97-112 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T2 134-139 Body_part denotes ovary http://purl.obolibrary.org/obo/UBERON_0000992
T3 272-287 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T4 373-388 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T5 408-413 Body_part denotes ovary http://purl.obolibrary.org/obo/UBERON_0000992
T6 822-837 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T7 860-868 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T10 1197-1205 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T13 1301-1310 Body_part denotes membranes http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T16 1355-1359 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T17 1610-1627 Body_part denotes cellular membrane http://purl.obolibrary.org/obo/GO_0005886
T18 1842-1857 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T19 1930-1945 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T20 2022-2030 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 1355-1359 Body_part denotes hand http://purl.obolibrary.org/obo/MAT_0000091

sentences

Id Subject Object Predicate Lexical cue
T1 0-149 Sentence denotes Effect of gangliosides on the distribution of a glycosylphosphatidylinositol-anchored protein in plasma membrane from Chinese hamster ovary-K1 cells.
T2 150-288 Sentence denotes Glycosylphosphatidylinositol (GPI)-anchored proteins are clustered mainly in sphingolipid-cholesterol microdomains of the plasma membrane.
T3 289-485 Sentence denotes The distribution of GPI-anchored fusion yellow fluorescent protein (GPI-YFP) in the plasma membrane of Chinese hamster ovary (CHO)-K1 cells with different glycolipid compositions was investigated.
T4 486-761 Sentence denotes Cells depleted of glycosphingolipids by inhibiting glucosylceramide synthase activity or cell lines expressing different gangliosides caused by stable transfection of appropriate ganglioside glycosyltransferases or exposed to exogenous GM1 were transfected with GPI-YFP cDNA.
T5 762-932 Sentence denotes The distribution of GPI-YFP fusion protein expressed at the plasma membrane was studied using the membrane-impermeable cross-linking agent bis(sulfosuccinimidyl)suberate.
T6 933-1161 Sentence denotes Results indicate that GPI-YFP forms clusters at the surface of cells expressing GM3, or cells depleted of glycolipids, or transfected cells expressing mainly GD3 and GT3, or GM1 and GD1a, or mostly GM2, or highly expressing GM1.
T7 1162-1341 Sentence denotes However, no significant changes in membrane microdomains of GPI-YFP were detected in the different glycolipid environments provided by the membranes of the cell lines under study.
T8 1342-1529 Sentence denotes On the other hand, wild type CHO-K1 cells exposed to 100 microm GM1 before cross-linking with bis(sulfosuccinimidyl)suberate showed a dramatic reduction in the amount of GPI-YFP clusters.
T9 1530-1789 Sentence denotes These findings clearly indicate that manipulating the glycolipid content of the cellular membrane, just by changing the ganglioside biosynthetic activity of the cell, did not significantly affect the association of GPI-YFP on the cell surface of CHO-K1 cells.
T10 1790-2073 Sentence denotes The effect of exogenous GM1 gangliosides on GPI-YFP plasma membrane distribution might be a consequence of the ganglioside level reached in plasma membrane and/or the effect of particular ganglioside species (micelles) that lead to membrane architecture and/or dynamic modifications.

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-149 Sentence denotes Effect of gangliosides on the distribution of a glycosylphosphatidylinositol-anchored protein in plasma membrane from Chinese hamster ovary-K1 cells.
T2 150-288 Sentence denotes Glycosylphosphatidylinositol (GPI)-anchored proteins are clustered mainly in sphingolipid-cholesterol microdomains of the plasma membrane.
T3 289-485 Sentence denotes The distribution of GPI-anchored fusion yellow fluorescent protein (GPI-YFP) in the plasma membrane of Chinese hamster ovary (CHO)-K1 cells with different glycolipid compositions was investigated.
T4 486-761 Sentence denotes Cells depleted of glycosphingolipids by inhibiting glucosylceramide synthase activity or cell lines expressing different gangliosides caused by stable transfection of appropriate ganglioside glycosyltransferases or exposed to exogenous GM1 were transfected with GPI-YFP cDNA.
T5 762-932 Sentence denotes The distribution of GPI-YFP fusion protein expressed at the plasma membrane was studied using the membrane-impermeable cross-linking agent bis(sulfosuccinimidyl)suberate.
T6 933-1161 Sentence denotes Results indicate that GPI-YFP forms clusters at the surface of cells expressing GM3, or cells depleted of glycolipids, or transfected cells expressing mainly GD3 and GT3, or GM1 and GD1a, or mostly GM2, or highly expressing GM1.
T7 1162-1341 Sentence denotes However, no significant changes in membrane microdomains of GPI-YFP were detected in the different glycolipid environments provided by the membranes of the cell lines under study.
T8 1342-1529 Sentence denotes On the other hand, wild type CHO-K1 cells exposed to 100 microm GM1 before cross-linking with bis(sulfosuccinimidyl)suberate showed a dramatic reduction in the amount of GPI-YFP clusters.
T9 1530-1789 Sentence denotes These findings clearly indicate that manipulating the glycolipid content of the cellular membrane, just by changing the ganglioside biosynthetic activity of the cell, did not significantly affect the association of GPI-YFP on the cell surface of CHO-K1 cells.
T10 1790-2073 Sentence denotes The effect of exogenous GM1 gangliosides on GPI-YFP plasma membrane distribution might be a consequence of the ganglioside level reached in plasma membrane and/or the effect of particular ganglioside species (micelles) that lead to membrane architecture and/or dynamic modifications.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 722-725 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T2 1013-1016 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T3 1091-1094 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T4 1099-1102 Glycan denotes GT3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G93899SO
T5 1107-1110 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T6 1115-1119 Glycan denotes GD1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE
T7 1131-1134 Glycan denotes GM2 https://api.glycosmos.org/wurcs2image/latest/png/binary/G79389NT
T8 1157-1160 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T9 1406-1409 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T10 1814-1817 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 722-725 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T2 1099-1102 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT3 http://www.glycoepitope.jp/epitopes/EP0070
T3 1107-1110 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T4 1115-1119 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GD1a http://www.glycoepitope.jp/epitopes/EP0056
T5 1157-1160 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T6 1406-1409 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T7 1814-1817 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 118-133 OrganismTaxon denotes Chinese hamster 10029
T2 392-407 OrganismTaxon denotes Chinese hamster 10029

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 1355-1359 Body_part denotes hand http://purl.obolibrary.org/obo/MAT_0000091

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 97-112 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T2 134-139 Body_part denotes ovary http://purl.obolibrary.org/obo/UBERON_0000992
T3 272-287 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T4 373-388 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T5 408-413 Body_part denotes ovary http://purl.obolibrary.org/obo/UBERON_0000992
T6 822-837 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T7 860-868 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T10 1197-1205 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T13 1301-1310 Body_part denotes membranes http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T16 1355-1359 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T17 1610-1627 Body_part denotes cellular membrane http://purl.obolibrary.org/obo/GO_0005886
T18 1842-1857 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T19 1930-1945 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T20 2022-2030 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158