PubMed:12198199 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/12198199","sourcedb":"PubMed","sourceid":"12198199","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/12198199","text":"Transcriptional regulation of a rice mitogen-activated protein kinase gene, OsMAPK4, in response to environmental stresses.\nMitogen-activated protein kinase (MAPK) cascades play important roles in signal transduction of extracellular stimuli in eukaryotes. However, stimulatory signals for plant MAPKs have not been well elucidated. Here, a cDNA clone, termed Oryza sativa MAPK4 (OsMAPK4), from rice encoding a protein that showed homology with the eukaryotic MAPKs was isolated. According to the phylogenetic analysis, OsMAPK4 belongs to subgroup IV MAPK in plants. OsMAPK4 transcripts were expressed strongly in mature leaves and weakly in young leaves and panicles. The gene was also differentially expressed in roots at different developmental stages. In addition, the mRNA level of OsMAPK4 was up-regulated under sugar starvation, high salinity and cold treatments. These results suggest that this OsMAPK4 functions not only in developmental programs but also in stress-signaling pathways.","tracks":[{"project":"21k_plant_trait_mention","denotations":[{"id":"M_0","span":{"begin":197,"end":216},"obj":"funRiceGene:486, xzyao:14470"},{"id":"M_1","span":{"begin":818,"end":823},"obj":"funRiceGene:195"},{"id":"M_2","span":{"begin":642,"end":654},"obj":"xzyao:6996"},{"id":"M_3","span":{"begin":150,"end":156},"obj":"funRiceGene:512"},{"id":"M_4","span":{"begin":854,"end":858},"obj":"WTO:0000129, funRiceGene:509"},{"id":"M_5","span":{"begin":841,"end":849},"obj":"funRiceGene:375"},{"id":"M_6","span":{"begin":142,"end":156},"obj":"funRiceGene:313, xzyao:7646"},{"id":"M_7","span":{"begin":150,"end":156},"obj":"funRiceGene:139"},{"id":"M_8","span":{"begin":290,"end":295},"obj":"hunflair:NA:Species"},{"id":"M_9","span":{"begin":296,"end":301},"obj":"hunflair:NA:Gene"},{"id":"M_10","span":{"begin":460,"end":465},"obj":"hunflair:NA:Gene"},{"id":"M_11","span":{"begin":360,"end":372},"obj":"hunflair:NA:Species"},{"id":"M_12","span":{"begin":37,"end":69},"obj":"hunflair:NA:Gene"},{"id":"M_13","span":{"begin":124,"end":156},"obj":"hunflair:NA:Gene"},{"id":"M_14","span":{"begin":32,"end":36},"obj":"hunflair:NA:Species"},{"id":"M_15","span":{"begin":395,"end":399},"obj":"hunflair:NA:Species"},{"id":"M_16","span":{"begin":373,"end":378},"obj":"hunflair:NA:Gene"},{"id":"M_17","span":{"begin":76,"end":83},"obj":"hunflair:NA:Gene"},{"id":"M_18","span":{"begin":380,"end":387},"obj":"hunflair:NA:Gene"},{"id":"M_19","span":{"begin":520,"end":527},"obj":"hunflair:NA:Gene"},{"id":"M_20","span":{"begin":567,"end":574},"obj":"hunflair:NA:Gene"},{"id":"M_21","span":{"begin":787,"end":794},"obj":"hunflair:NA:Gene"},{"id":"M_22","span":{"begin":903,"end":910},"obj":"hunflair:NA:Gene"},{"id":"M_23","span":{"begin":818,"end":823},"obj":"hunflair:NA:Chemical"},{"id":"M_24","span":{"begin":158,"end":162},"obj":"hunflair:NA:Gene"},{"id":"M_25","span":{"begin":551,"end":555},"obj":"hunflair:NA:Gene"},{"id":"M_26","span":{"begin":360,"end":372},"obj":"pubtator:4530:Species"},{"id":"M_27","span":{"begin":32,"end":36},"obj":"pubtator:4530:Species"},{"id":"M_28","span":{"begin":395,"end":399},"obj":"pubtator:4530:Species"},{"id":"M_29","span":{"begin":818,"end":823},"obj":"pubtator:MESH:D002241:Chemical"}],"attributes":[{"subj":"M_0","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_1","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_2","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_3","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_4","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_5","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_6","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_7","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_8","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_9","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_10","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_11","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_12","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_13","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_14","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_15","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_16","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_17","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_18","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_19","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_20","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_21","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_22","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_23","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_24","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_25","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_26","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_27","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_28","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_29","pred":"source","obj":"21k_plant_trait_mention"}]},{"project":"pqqtest_sentence","denotations":[{"id":"M_0","span":{"begin":836,"end":849},"obj":"cand:funRiceGene:193-salinity stress"},{"id":"M_1","span":{"begin":836,"end":849},"obj":"cand:funRiceGene:68-drought sensitivity"},{"id":"M_2","span":{"begin":836,"end":849},"obj":"cand:PECO:0007404-drought environment exposure"},{"id":"M_3","span":{"begin":836,"end":849},"obj":"cand:TO:0000458-drought recovery"},{"id":"M_4","span":{"begin":836,"end":849},"obj":"cand:WTO:0000353-spring drought"},{"id":"M_5","span":{"begin":836,"end":849},"obj":"cand:funRiceGene:72-drought tolerance"},{"id":"M_6","span":{"begin":836,"end":849},"obj":"cand:funRiceGene:256-salinity"},{"id":"M_7","span":{"begin":836,"end":849},"obj":"cand:WTO:0000194-soil acidity"},{"id":"M_8","span":{"begin":836,"end":849},"obj":"cand:WTO:0000024-high fertility"},{"id":"M_9","span":{"begin":836,"end":849},"obj":"cand:WTO:0000122-air humidity"},{"id":"M_10","span":{"begin":836,"end":849},"obj":"cand:WTO:0000575-zinc toxicity"},{"id":"M_11","span":{"begin":854,"end":869},"obj":"cand:funRiceGene:326-cold stress"},{"id":"M_12","span":{"begin":854,"end":869},"obj":"cand:PECO:0007174-cold temperature exposure"},{"id":"M_13","span":{"begin":854,"end":869},"obj":"cand:PECO:0007338-cold water temperature exposure"},{"id":"M_14","span":{"begin":854,"end":869},"obj":"cand:funRiceGene:145-cold tolerance"},{"id":"M_15","span":{"begin":854,"end":869},"obj":"cand:WTO:0000304-cold resistance"},{"id":"M_16","span":{"begin":854,"end":869},"obj":"cand:PECO:0007332-cold air temperature exposure"},{"id":"M_17","span":{"begin":854,"end":869},"obj":"cand:PPO:0002048-cone presence"},{"id":"M_18","span":{"begin":854,"end":869},"obj":"cand:PPO:0002346-cones present"},{"id":"M_19","span":{"begin":773,"end":783},"obj":"cand:WTO:0000237-level of starch-surface friabilin"},{"id":"M_20","span":{"begin":773,"end":783},"obj":"cand:TO:0000598-protein content"},{"id":"M_21","span":{"begin":773,"end":783},"obj":"cand:TO:0000325-soluble protein content"},{"id":"M_22","span":{"begin":773,"end":783},"obj":"cand:funRiceGene:103-transcription factor"},{"id":"M_23","span":{"begin":773,"end":783},"obj":"cand:TO:0000610-soluble to total protein ratio"},{"id":"M_24","span":{"begin":773,"end":783},"obj":"cand:funRiceGene:25-transcription activator"},{"id":"M_25","span":{"begin":773,"end":783},"obj":"cand:PO:0025569-free petal"},{"id":"M_26","span":{"begin":773,"end":783},"obj":"cand:PO:0004717-long cell"},{"id":"M_27","span":{"begin":773,"end":783},"obj":"cand:PPO:0001013-true leaf"},{"id":"M_28","span":{"begin":773,"end":783},"obj":"cand:funRiceGene:522-manganese"},{"id":"M_29","span":{"begin":773,"end":783},"obj":"cand:PO:0025587-free sepal"},{"id":"M_30","span":{"begin":787,"end":794},"obj":"GeneID:RAPID:Os06g0699400MSUID:LOC_Os06g48590"},{"id":"T36635","span":{"begin":360,"end":372},"obj":"xzyao:1553"},{"id":"T31283","span":{"begin":63,"end":69},"obj":"funRiceGene:512"},{"id":"T59575","span":{"begin":150,"end":156},"obj":"funRiceGene:512"},{"id":"T562","span":{"begin":818,"end":823},"obj":"funRiceGene:195"},{"id":"T67931","span":{"begin":836,"end":849},"obj":"xzyao:29565"},{"id":"T63507","span":{"begin":63,"end":69},"obj":"funRiceGene:139"},{"id":"T42436","span":{"begin":150,"end":156},"obj":"funRiceGene:139"},{"id":"T16590","span":{"begin":854,"end":869},"obj":"xzyao:24263"},{"id":"T64235","span":{"begin":37,"end":69},"obj":"xzyao:15467"},{"id":"T63381","span":{"begin":124,"end":156},"obj":"xzyao:15467"},{"id":"T84195","span":{"begin":669,"end":677},"obj":"xzyao:38844"},{"id":"T95369","span":{"begin":614,"end":627},"obj":"xzyao:19228"},{"id":"T83334","span":{"begin":55,"end":69},"obj":"funRiceGene:313, xzyao:43005"},{"id":"T75416","span":{"begin":142,"end":156},"obj":"funRiceGene:313, xzyao:43005"},{"id":"T65549","span":{"begin":854,"end":858},"obj":"WTO:0000129, funRiceGene:509"},{"id":"T41590","span":{"begin":818,"end":834},"obj":"xzyao:12674"},{"id":"T96907","span":{"begin":197,"end":216},"obj":"funRiceGene:486, xzyao:13033"},{"id":"T30997","span":{"begin":968,"end":974},"obj":"funRiceGene:361"},{"id":"T30022","span":{"begin":734,"end":754},"obj":"xzyao:32061"},{"id":"T58017","span":{"begin":55,"end":74},"obj":"xzyao:10272"},{"id":"T51484","span":{"begin":642,"end":654},"obj":"xzyao:5627"},{"id":"T94604","span":{"begin":841,"end":849},"obj":"funRiceGene:375"},{"id":"T96074","span":{"begin":975,"end":993},"obj":"xzyao:37924"},{"id":"T75760","span":{"begin":100,"end":122},"obj":"xzyao:39684"},{"id":"T49279","span":{"begin":0,"end":26},"obj":"xzyao:20813"},{"id":"T80704","span":{"begin":124,"end":156},"obj":"hunflair:NA:Gene"},{"id":"T69548","span":{"begin":37,"end":69},"obj":"hunflair:NA:Gene"},{"id":"T1107","span":{"begin":158,"end":162},"obj":"hunflair:NA:Gene"},{"id":"T85846","span":{"begin":551,"end":555},"obj":"hunflair:NA:Gene"},{"id":"T80161","span":{"begin":360,"end":372},"obj":"hunflair:NA:Species"},{"id":"T38824","span":{"begin":373,"end":378},"obj":"hunflair:NA:Gene"},{"id":"M_31","span":{"begin":296,"end":301},"obj":"hunflair:NA:Gene"},{"id":"M_32","span":{"begin":460,"end":465},"obj":"hunflair:NA:Gene"},{"id":"M_33","span":{"begin":32,"end":36},"obj":"hunflair:NA:Species"},{"id":"M_34","span":{"begin":395,"end":399},"obj":"hunflair:NA:Species"},{"id":"M_35","span":{"begin":818,"end":823},"obj":"hunflair:NA:Chemical"},{"id":"M_36","span":{"begin":290,"end":295},"obj":"hunflair:NA:Species"},{"id":"M_37","span":{"begin":76,"end":83},"obj":"hunflair:NA:Gene"},{"id":"M_38","span":{"begin":380,"end":387},"obj":"hunflair:NA:Gene"},{"id":"M_39","span":{"begin":520,"end":527},"obj":"hunflair:NA:Gene"},{"id":"M_40","span":{"begin":567,"end":574},"obj":"hunflair:NA:Gene"},{"id":"M_41","span":{"begin":787,"end":794},"obj":"hunflair:NA:Gene"},{"id":"M_42","span":{"begin":903,"end":910},"obj":"hunflair:NA:Gene"},{"id":"M_43","span":{"begin":360,"end":372},"obj":"pubtator:4530:Species"},{"id":"M_44","span":{"begin":818,"end":823},"obj":"pubtator:MESH:D002241:Chemical"},{"id":"M_45","span":{"begin":32,"end":36},"obj":"pubtator:4530:Species"},{"id":"M_46","span":{"begin":395,"end":399},"obj":"pubtator:4530:Species"}],"attributes":[{"subj":"M_0","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_1","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_2","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_3","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_4","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_5","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_6","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_7","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_8","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_9","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_10","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_11","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_12","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_13","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_14","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_15","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_16","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_17","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_18","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_19","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_20","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_21","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_22","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_23","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_24","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_25","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_26","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_27","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_28","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_29","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_30","pred":"source","obj":"pqqtest_sentence"},{"subj":"T36635","pred":"source","obj":"pqqtest_sentence"},{"subj":"T31283","pred":"source","obj":"pqqtest_sentence"},{"subj":"T59575","pred":"source","obj":"pqqtest_sentence"},{"subj":"T562","pred":"source","obj":"pqqtest_sentence"},{"subj":"T67931","pred":"source","obj":"pqqtest_sentence"},{"subj":"T63507","pred":"source","obj":"pqqtest_sentence"},{"subj":"T42436","pred":"source","obj":"pqqtest_sentence"},{"subj":"T16590","pred":"source","obj":"pqqtest_sentence"},{"subj":"T64235","pred":"source","obj":"pqqtest_sentence"},{"subj":"T63381","pred":"source","obj":"pqqtest_sentence"},{"subj":"T84195","pred":"source","obj":"pqqtest_sentence"},{"subj":"T95369","pred":"source","obj":"pqqtest_sentence"},{"subj":"T83334","pred":"source","obj":"pqqtest_sentence"},{"subj":"T75416","pred":"source","obj":"pqqtest_sentence"},{"subj":"T65549","pred":"source","obj":"pqqtest_sentence"},{"subj":"T41590","pred":"source","obj":"pqqtest_sentence"},{"subj":"T96907","pred":"source","obj":"pqqtest_sentence"},{"subj":"T30997","pred":"source","obj":"pqqtest_sentence"},{"subj":"T30022","pred":"source","obj":"pqqtest_sentence"},{"subj":"T58017","pred":"source","obj":"pqqtest_sentence"},{"subj":"T51484","pred":"source","obj":"pqqtest_sentence"},{"subj":"T94604","pred":"source","obj":"pqqtest_sentence"},{"subj":"T96074","pred":"source","obj":"pqqtest_sentence"},{"subj":"T75760","pred":"source","obj":"pqqtest_sentence"},{"subj":"T49279","pred":"source","obj":"pqqtest_sentence"},{"subj":"T80704","pred":"source","obj":"pqqtest_sentence"},{"subj":"T69548","pred":"source","obj":"pqqtest_sentence"},{"subj":"T1107","pred":"source","obj":"pqqtest_sentence"},{"subj":"T85846","pred":"source","obj":"pqqtest_sentence"},{"subj":"T80161","pred":"source","obj":"pqqtest_sentence"},{"subj":"T38824","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_31","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_32","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_33","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_34","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_35","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_36","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_37","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_38","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_39","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_40","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_41","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_42","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_43","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_44","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_45","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_46","pred":"source","obj":"pqqtest_sentence"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"21k_plant_trait_mention","color":"#93d9ec","default":true},{"id":"pqqtest_sentence","color":"#ece593"}]}]}}