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GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 23-34 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T2 48-59 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T3 117-138 Glycan_Motif denotes N-acetylgalactosamine https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB
T4 190-201 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T5 553-574 Glycan_Motif denotes N-acetylgalactosamine https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB
T6 580-589 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE
T8 637-658 Glycan_Motif denotes N-acetylgalactosamine https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB
T9 711-722 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T10 759-770 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T11 872-883 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T12 912-923 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T13 1022-1033 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T14 1470-1481 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T15 1550-1561 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T16 1875-1886 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T1 23-34 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T2 48-59 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T3 190-201 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T4 711-722 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T5 759-770 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T6 872-883 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T7 912-923 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T8 1022-1033 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T9 1470-1481 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T10 1550-1561 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T11 1875-1886 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin

sentences

Id Subject Object Predicate Lexical cue
T1 0-220 Sentence denotes Enzymatic synthesis of chondroitin with a novel chondroitin sulfate N-acetylgalactosaminyltransferase that transfers N-acetylgalactosamine to glucuronic acid in initiation and elongation of chondroitin sulfate synthesis.
T2 221-467 Sentence denotes We found a novel glycosyltransferase gene having a hypothetical beta 1,4-galactosyltransferase motif (GenBank accession number ) by a BLAST search and cloned its full-length open reading frame using the 5'-rapid amplification of cDNA ends method.
T3 468-537 Sentence denotes The truncated form was expressed in insect cells as a soluble enzyme.
T4 538-632 Sentence denotes It transferred N-acetylgalactosamine, not galactose, to para-nitrophenyl-beta-glucuronic acid.
T5 633-808 Sentence denotes The N-acetylgalactosamine-glucuronic acid linkage has been identified only in chondroitin sulfate; therefore, we examined its chondroitin elongation and initiation activities.
T6 809-1125 Sentence denotes N-Acetylgalactosaminyltransferase activity was observed toward chondroitin poly- and oligosaccharides, chondroitin sulfate oligosaccharides, and linkage tetrasaccharide (GlcA-Gal-Gal-Xyl-O-methoxyphenyl), and the chondroitin polysaccharide and linkage tetrasaccharide were better acceptor substrates than the others.
T7 1126-1342 Sentence denotes Northern blot analysis and quantitative real-time PCR analysis revealed that its 4-kb transcripts were highly expressed in thyroid and placenta, although they were ubiquitously expressed in various tissues and cells.
T8 1343-1500 Sentence denotes These results suggest that this enzyme has N-acetylgalactosaminyltransferase activity in both the elongation and initiation of chondroitin sulfate synthesis.
T9 1501-1587 Sentence denotes Furthermore, we performed enzymatic synthesis of chondroitin pentasaccharide in vitro.
T10 1588-1844 Sentence denotes In one tube reaction with four enzymes, beta 1,4-galactosyltransferase-VII, beta 1,3-galactosyltransferase-VI, glucuronyltransferase-I, and this enzyme, and a synthetic xylose-peptide acceptor, the structure GalNAc-GlcA-Gal-Gal-Xyl-peptide was constructed.
T11 1845-1962 Sentence denotes This is the first report of a chondroitin pentasaccharide constructed with recombinant glycosyltransferases in vitro.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 23-34 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T2 48-59 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T3 117-138 https://glytoucan.org/Structures/Glycans/G27025MB denotes N-acetylgalactosamine
T4 190-201 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T5 553-574 https://glytoucan.org/Structures/Glycans/G27025MB denotes N-acetylgalactosamine
T6 580-589 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T7 580-589 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose
T8 637-658 https://glytoucan.org/Structures/Glycans/G27025MB denotes N-acetylgalactosamine
T9 711-722 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T10 759-770 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T11 872-883 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T12 912-923 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T13 1022-1033 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T14 1470-1481 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T15 1550-1561 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T16 1875-1886 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 1249-1256 http://purl.obolibrary.org/obo/MAT_0000081 denotes thyroid
T2 1261-1269 http://purl.obolibrary.org/obo/MAT_0000279 denotes placenta

glycogenes

Id Subject Object Predicate Lexical cue
PD-GlycoGenes20190927-B_T1 683-686 https://acgg.asia/db/ggdb/info/gg135 denotes has
PD-GlycoGenes20190927-B_T2 1382-1385 https://acgg.asia/db/ggdb/info/gg135 denotes has

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 1249-1256 Body_part denotes thyroid http://purl.obolibrary.org/obo/MAT_0000081
T2 1261-1269 Body_part denotes placenta http://purl.obolibrary.org/obo/MAT_0000279

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 23-34 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T2 48-59 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T3 190-201 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T4 711-722 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T5 759-770 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T6 872-883 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T7 912-923 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T8 1022-1033 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T9 1470-1481 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T10 1550-1561 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T11 1796-1802 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T12 1875-1886 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 23-34 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T2 48-59 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T3 190-201 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T4 711-722 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T5 759-770 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T6 872-883 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T7 912-923 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T8 1022-1033 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T9 1470-1481 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T10 1550-1561 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T11 1875-1886 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 884-888 Cell denotes poly http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1249-1256 Body_part denotes thyroid http://purl.obolibrary.org/obo/UBERON_0002046
T2 1261-1269 Body_part denotes placenta http://purl.obolibrary.org/obo/UBERON_0001987
T3 1595-1599 Body_part denotes tube http://purl.obolibrary.org/obo/UBERON_0000025

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 1249-1256 Body_part denotes thyroid http://purl.obolibrary.org/obo/MAT_0000081
T2 1261-1269 Body_part denotes placenta http://purl.obolibrary.org/obo/MAT_0000279

sentences

Id Subject Object Predicate Lexical cue
T1 0-220 Sentence denotes Enzymatic synthesis of chondroitin with a novel chondroitin sulfate N-acetylgalactosaminyltransferase that transfers N-acetylgalactosamine to glucuronic acid in initiation and elongation of chondroitin sulfate synthesis.
T2 221-467 Sentence denotes We found a novel glycosyltransferase gene having a hypothetical beta 1,4-galactosyltransferase motif (GenBank accession number ) by a BLAST search and cloned its full-length open reading frame using the 5'-rapid amplification of cDNA ends method.
T3 468-537 Sentence denotes The truncated form was expressed in insect cells as a soluble enzyme.
T4 538-632 Sentence denotes It transferred N-acetylgalactosamine, not galactose, to para-nitrophenyl-beta-glucuronic acid.
T5 633-808 Sentence denotes The N-acetylgalactosamine-glucuronic acid linkage has been identified only in chondroitin sulfate; therefore, we examined its chondroitin elongation and initiation activities.
T6 809-1125 Sentence denotes N-Acetylgalactosaminyltransferase activity was observed toward chondroitin poly- and oligosaccharides, chondroitin sulfate oligosaccharides, and linkage tetrasaccharide (GlcA-Gal-Gal-Xyl-O-methoxyphenyl), and the chondroitin polysaccharide and linkage tetrasaccharide were better acceptor substrates than the others.
T7 1126-1342 Sentence denotes Northern blot analysis and quantitative real-time PCR analysis revealed that its 4-kb transcripts were highly expressed in thyroid and placenta, although they were ubiquitously expressed in various tissues and cells.
T8 1343-1500 Sentence denotes These results suggest that this enzyme has N-acetylgalactosaminyltransferase activity in both the elongation and initiation of chondroitin sulfate synthesis.
T9 1501-1587 Sentence denotes Furthermore, we performed enzymatic synthesis of chondroitin pentasaccharide in vitro.
T10 1588-1844 Sentence denotes In one tube reaction with four enzymes, beta 1,4-galactosyltransferase-VII, beta 1,3-galactosyltransferase-VI, glucuronyltransferase-I, and this enzyme, and a synthetic xylose-peptide acceptor, the structure GalNAc-GlcA-Gal-Gal-Xyl-peptide was constructed.
T11 1845-1962 Sentence denotes This is the first report of a chondroitin pentasaccharide constructed with recombinant glycosyltransferases in vitro.

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-220 Sentence denotes Enzymatic synthesis of chondroitin with a novel chondroitin sulfate N-acetylgalactosaminyltransferase that transfers N-acetylgalactosamine to glucuronic acid in initiation and elongation of chondroitin sulfate synthesis.
T2 221-467 Sentence denotes We found a novel glycosyltransferase gene having a hypothetical beta 1,4-galactosyltransferase motif (GenBank accession number ) by a BLAST search and cloned its full-length open reading frame using the 5'-rapid amplification of cDNA ends method.
T3 468-537 Sentence denotes The truncated form was expressed in insect cells as a soluble enzyme.
T4 538-632 Sentence denotes It transferred N-acetylgalactosamine, not galactose, to para-nitrophenyl-beta-glucuronic acid.
T5 633-808 Sentence denotes The N-acetylgalactosamine-glucuronic acid linkage has been identified only in chondroitin sulfate; therefore, we examined its chondroitin elongation and initiation activities.
T6 809-1125 Sentence denotes N-Acetylgalactosaminyltransferase activity was observed toward chondroitin poly- and oligosaccharides, chondroitin sulfate oligosaccharides, and linkage tetrasaccharide (GlcA-Gal-Gal-Xyl-O-methoxyphenyl), and the chondroitin polysaccharide and linkage tetrasaccharide were better acceptor substrates than the others.
T7 1126-1342 Sentence denotes Northern blot analysis and quantitative real-time PCR analysis revealed that its 4-kb transcripts were highly expressed in thyroid and placenta, although they were ubiquitously expressed in various tissues and cells.
T8 1343-1500 Sentence denotes These results suggest that this enzyme has N-acetylgalactosaminyltransferase activity in both the elongation and initiation of chondroitin sulfate synthesis.
T9 1501-1587 Sentence denotes Furthermore, we performed enzymatic synthesis of chondroitin pentasaccharide in vitro.
T10 1588-1844 Sentence denotes In one tube reaction with four enzymes, beta 1,4-galactosyltransferase-VII, beta 1,3-galactosyltransferase-VI, glucuronyltransferase-I, and this enzyme, and a synthetic xylose-peptide acceptor, the structure GalNAc-GlcA-Gal-Gal-Xyl-peptide was constructed.
T11 1845-1962 Sentence denotes This is the first report of a chondroitin pentasaccharide constructed with recombinant glycosyltransferases in vitro.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 23-34 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T2 48-59 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T3 190-201 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T4 711-722 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T5 759-770 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T6 872-883 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T7 912-923 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T8 1022-1033 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T9 1470-1481 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T10 1550-1561 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T11 1796-1802 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T12 1875-1886 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 23-34 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T2 48-59 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T3 190-201 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T4 711-722 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T5 759-770 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T6 872-883 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T7 912-923 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T8 1022-1033 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T9 1470-1481 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T10 1550-1561 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T11 1875-1886 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1249-1256 Body_part denotes thyroid http://purl.obolibrary.org/obo/UBERON_0002046
T2 1261-1269 Body_part denotes placenta http://purl.obolibrary.org/obo/UBERON_0001987
T3 1595-1599 Body_part denotes tube http://purl.obolibrary.org/obo/UBERON_0000025

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 884-888 Cell denotes poly http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775