PubMed:12145278
Annnotations
ggdb-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 50-91 | https://acgg.asia/db/ggdb/info/gg164 | denotes | chondroitin sulfate glucuronyltransferase |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 50-61 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T2 | 126-147 | Glycan_Motif | denotes | N-acetylgalactosamine | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB |
| T3 | 273-284 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T4 | 611-622 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T5 | 766-777 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T6 | 782-793 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T7 | 925-935 | Glycan_Motif | denotes | hyaluronan | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00017MO |
| T8 | 954-961 | Glycan_Motif | denotes | heparin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54161DR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00021MO |
| T10 | 1326-1337 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T11 | 1353-1364 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T12 | 1399-1410 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T13 | 1821-1832 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
GGDB-2020
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 50-91 | https://acgg.asia/db/ggdb/info/gg164 | denotes | chondroitin sulfate glucuronyltransferase |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 50-61 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T2 | 273-284 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T3 | 611-622 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T4 | 766-777 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T5 | 782-793 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T6 | 937-952 | http://www.glycoepitope.jp/epitopes/EP0086 | denotes | heparan sulfate |
| T7 | 1326-1337 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T8 | 1353-1364 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T9 | 1399-1410 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T10 | 1821-1832 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-148 | Sentence | denotes | Molecular cloning and characterization of a novel chondroitin sulfate glucuronyltransferase that transfers glucuronic acid to N-acetylgalactosamine. |
| T2 | 149-294 | Sentence | denotes | We found a novel human gene (GenBank accession number, Kazusa DNA Research Institute KIAA1402) that possesses homology with chondroitin synthase. |
| T3 | 295-405 | Sentence | denotes | The full-length open reading frame consists of 772 amino acids and encodes a typical type II membrane protein. |
| T4 | 406-632 | Sentence | denotes | This enzyme had a domain containing beta 3-glycosyltransferase motifs, which might be a beta3-glucuronyltransferase domain, but no domain with beta 4-glycosyltransferase motifs, although both are found in chondroitin synthase. |
| T5 | 633-712 | Sentence | denotes | The putative catalytic domain was expressed in COS-7 cells as a soluble enzyme. |
| T6 | 713-872 | Sentence | denotes | Its glucuronyltransferase activity was observed when chondroitin and chondroitin sulfate polysaccharides and oligosaccharides were used as acceptor substrates. |
| T7 | 873-1072 | Sentence | denotes | However, it was not detected when dermatan sulfate, hyaluronan, heparan sulfate, heparin, N-acetylheparosan, lactosamine tetrasaccharide, and linkage tri- and tetrasaccharide acceptors were employed. |
| T8 | 1073-1234 | Sentence | denotes | The reaction product, which was speculated to exhibit a GlcA beta 1-3GalNAc linkage structure at its non-reducing terminus, showed the following characteristics. |
| T9 | 1235-1279 | Sentence | denotes | 1) It was catabolized by beta-glucuronidase. |
| T10 | 1280-1377 | Sentence | denotes | 2) It was an acceptor for Escherichia coli K4 chondroitin polymerase (K4 chondroitin polymerase). |
| T11 | 1378-1457 | Sentence | denotes | 3) The product of K4 chondroitin polymerase was cleaved by chondroitinase ACII. |
| T12 | 1458-1557 | Sentence | denotes | On the other hand, no N-acetylgalactosaminyltransferase activity was detected toward any acceptors. |
| T13 | 1558-1770 | Sentence | denotes | Quantitative real time PCR analysis revealed that its transcripts were highly expressed in the placenta, small intestine, and pancreas, although they were ubiquitously expressed in various tissues and cell lines. |
| T14 | 1771-1868 | Sentence | denotes | This enzyme could play a role in the synthesis of chondroitin sulfate as a glucuronyltransferase. |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 50-61 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T2 | 126-147 | https://glytoucan.org/Structures/Glycans/G27025MB | denotes | N-acetylgalactosamine |
| T3 | 273-284 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T4 | 611-622 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T5 | 766-777 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T6 | 782-793 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T7 | 925-935 | https://glytoucan.org/Structures/Glycans/G00017MO | denotes | hyaluronan |
| T8 | 954-961 | https://glytoucan.org/Structures/Glycans/G00021MO | denotes | heparin |
| T9 | 954-961 | https://glytoucan.org/Structures/Glycans/G54161DR | denotes | heparin |
| T10 | 1326-1337 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T11 | 1353-1364 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T12 | 1399-1410 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T13 | 1821-1832 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1471-1475 | http://purl.obolibrary.org/obo/MAT_0000091 | denotes | hand |
| T2 | 1653-1661 | http://purl.obolibrary.org/obo/MAT_0000279 | denotes | placenta |
| T3 | 1663-1678 | http://purl.obolibrary.org/obo/MAT_0000047 | denotes | small intestine |
| T4 | 1669-1678 | http://purl.obolibrary.org/obo/MAT_0000043 | denotes | intestine |
| T5 | 1684-1692 | http://purl.obolibrary.org/obo/MAT_0000075 | denotes | pancreas |
glycogenes
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoGenes20190927-B_T1 | 50-91 | https://acgg.asia/db/ggdb/info/gg164 | denotes | chondroitin sulfate glucuronyltransferase |
| PD-GlycoGenes20190927-B_T2 | 385-387 | https://acgg.asia/db/ggdb/info/gg111 | denotes | II |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 50-61 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T2 | 273-284 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T3 | 611-622 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T4 | 766-777 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T5 | 782-793 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T6 | 1326-1337 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T7 | 1353-1364 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T8 | 1399-1410 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T9 | 1821-1832 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T15 | 937-952 | Glycan | denotes | heparan sulfate | https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW |
mondo_disease
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 1684-1692 | Disease | denotes | pancreas | http://purl.obolibrary.org/obo/MONDO_0021040 |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 1471-1475 | Body_part | denotes | hand | http://purl.obolibrary.org/obo/MAT_0000091 |
| T2 | 1653-1661 | Body_part | denotes | placenta | http://purl.obolibrary.org/obo/MAT_0000279 |
| T3 | 1663-1678 | Body_part | denotes | small intestine | http://purl.obolibrary.org/obo/MAT_0000047 |
| T4 | 1684-1692 | Body_part | denotes | pancreas | http://purl.obolibrary.org/obo/MAT_0000075 |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 50-61 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T2 | 273-284 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T3 | 611-622 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T4 | 766-777 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T5 | 782-793 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T6 | 1326-1337 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T7 | 1353-1364 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T8 | 1399-1410 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T9 | 1821-1832 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T16 | 937-952 | Glycan | denotes | heparan sulfate | https://api.glycosmos.org/wurcs2image/latest/png/binary/G17927IW |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 50-61 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T2 | 273-284 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T3 | 611-622 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T4 | 766-777 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T5 | 782-793 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T6 | 937-952 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | heparan sulfate | http://www.glycoepitope.jp/epitopes/EP0086 |
| T7 | 1326-1337 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T8 | 1353-1364 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T9 | 1399-1410 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T10 | 1821-1832 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 388-396 | Body_part | denotes | membrane | http://purl.obolibrary.org/obo/UBERON_0000094 |
| T2 | 1471-1475 | Body_part | denotes | hand | http://purl.obolibrary.org/obo/UBERON_0002398 |
| T3 | 1653-1661 | Body_part | denotes | placenta | http://purl.obolibrary.org/obo/UBERON_0001987 |
| T4 | 1663-1678 | Body_part | denotes | small intestine | http://purl.obolibrary.org/obo/UBERON_0002108 |
| T5 | 1684-1692 | Body_part | denotes | pancreas | http://purl.obolibrary.org/obo/UBERON_0001264|http://purl.obolibrary.org/obo/UBERON_3011040 |
GlyCosmos15-Taxon
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 166-171 | Organism | denotes | human | 9606 |
| T2 | 1306-1322 | Organism | denotes | Escherichia coli | 562 |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-148 | Sentence | denotes | Molecular cloning and characterization of a novel chondroitin sulfate glucuronyltransferase that transfers glucuronic acid to N-acetylgalactosamine. |
| T2 | 149-294 | Sentence | denotes | We found a novel human gene (GenBank accession number, Kazusa DNA Research Institute KIAA1402) that possesses homology with chondroitin synthase. |
| T3 | 295-405 | Sentence | denotes | The full-length open reading frame consists of 772 amino acids and encodes a typical type II membrane protein. |
| T4 | 406-632 | Sentence | denotes | This enzyme had a domain containing beta 3-glycosyltransferase motifs, which might be a beta3-glucuronyltransferase domain, but no domain with beta 4-glycosyltransferase motifs, although both are found in chondroitin synthase. |
| T5 | 633-712 | Sentence | denotes | The putative catalytic domain was expressed in COS-7 cells as a soluble enzyme. |
| T6 | 713-872 | Sentence | denotes | Its glucuronyltransferase activity was observed when chondroitin and chondroitin sulfate polysaccharides and oligosaccharides were used as acceptor substrates. |
| T7 | 873-1072 | Sentence | denotes | However, it was not detected when dermatan sulfate, hyaluronan, heparan sulfate, heparin, N-acetylheparosan, lactosamine tetrasaccharide, and linkage tri- and tetrasaccharide acceptors were employed. |
| T8 | 1073-1234 | Sentence | denotes | The reaction product, which was speculated to exhibit a GlcA beta 1-3GalNAc linkage structure at its non-reducing terminus, showed the following characteristics. |
| T9 | 1235-1279 | Sentence | denotes | 1) It was catabolized by beta-glucuronidase. |
| T10 | 1280-1377 | Sentence | denotes | 2) It was an acceptor for Escherichia coli K4 chondroitin polymerase (K4 chondroitin polymerase). |
| T11 | 1378-1457 | Sentence | denotes | 3) The product of K4 chondroitin polymerase was cleaved by chondroitinase ACII. |
| T12 | 1458-1557 | Sentence | denotes | On the other hand, no N-acetylgalactosaminyltransferase activity was detected toward any acceptors. |
| T13 | 1558-1770 | Sentence | denotes | Quantitative real time PCR analysis revealed that its transcripts were highly expressed in the placenta, small intestine, and pancreas, although they were ubiquitously expressed in various tissues and cell lines. |
| T14 | 1771-1868 | Sentence | denotes | This enzyme could play a role in the synthesis of chondroitin sulfate as a glucuronyltransferase. |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 50-61 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T2 | 273-284 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T3 | 611-622 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T4 | 766-777 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T5 | 782-793 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T6 | 937-952 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | heparan sulfate | http://www.glycoepitope.jp/epitopes/EP0086 |
| T7 | 1326-1337 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T8 | 1353-1364 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T9 | 1399-1410 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T10 | 1821-1832 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
GlyCosmos15-FMA
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 1471-1475 | Body_part | denotes | hand | FMA:9712 |
| T2 | 1653-1661 | Body_part | denotes | placenta | FMA:0329329|FMA:63934 |
| T4 | 1663-1678 | Body_part | denotes | small intestine | FMA:7200 |
| T5 | 1684-1692 | Body_part | denotes | pancreas | FMA:7198 |
| T6 | 1747-1754 | Body_part | denotes | tissues | FMA:9637 |
GlyCosmos15-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 1471-1475 | Body_part | denotes | hand | http://purl.obolibrary.org/obo/MAT_0000091 |
| T2 | 1653-1661 | Body_part | denotes | placenta | http://purl.obolibrary.org/obo/MAT_0000279 |
| T3 | 1663-1678 | Body_part | denotes | small intestine | http://purl.obolibrary.org/obo/MAT_0000047 |
| T4 | 1684-1692 | Body_part | denotes | pancreas | http://purl.obolibrary.org/obo/MAT_0000075 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 166-171 | OrganismTaxon | denotes | human | 9606 |
| T2 | 1306-1322 | OrganismTaxon | denotes | Escherichia coli | 562 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 388-396 | Body_part | denotes | membrane | http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158 |
| T4 | 1471-1475 | Body_part | denotes | hand | http://purl.obolibrary.org/obo/UBERON_0002398 |
| T5 | 1653-1661 | Body_part | denotes | placenta | http://purl.obolibrary.org/obo/UBERON_0001987 |
| T6 | 1663-1678 | Body_part | denotes | small intestine | http://purl.obolibrary.org/obo/UBERON_0002108 |
| T7 | 1684-1692 | Body_part | denotes | pancreas | http://purl.obolibrary.org/obo/UBERON_0001264|http://purl.obolibrary.org/obo/UBERON_3011040 |