PubMed:12135769
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/12135769","sourcedb":"PubMed","sourceid":"12135769","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/12135769","text":"Molecular cloning and characterization of a novel member of the UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase family, pp-GalNAc-T12.\nWe cloned in silico a novel human UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase (pp-GalNAc-T), pp-GalNAc-T12. The deduced amino acid sequence of pp-GalNAc-T12 contains all conserved motifs in pp-GalNAc-T family proteins. Quantitative real time polymerase chain reaction analysis revealed that the pp-GalNAc-T12 transcript was expressed mainly in digestive organs such as stomach, small intestine and colon. The recombinant pp-GalNAc-T12 transferred GalNAc to the mucin-derived peptides such as the Muc1a, Muc5AC, EA2 peptides and the GalNAc-Muc5AC glycopeptide. Since mucins are glycoproteins mainly produced in the digestive organs, our results suggest that pp-GalNAc-T12 plays an important role in the initial step of mucin-type oligosaccharide biosynthesis in digestive organs.","tracks":[{"project":"ggdb-test","denotations":[{"id":"T1","span":{"begin":132,"end":142},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"T2","span":{"begin":253,"end":263},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"T3","span":{"begin":303,"end":313},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"T4","span":{"begin":455,"end":465},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"T5","span":{"begin":581,"end":591},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"T6","span":{"begin":817,"end":827},"obj":"https://acgg.asia/db/ggdb/info/gg098"}],"attributes":[{"subj":"T1","pred":"source","obj":"ggdb-test"},{"subj":"T2","pred":"source","obj":"ggdb-test"},{"subj":"T3","pred":"source","obj":"ggdb-test"},{"subj":"T4","pred":"source","obj":"ggdb-test"},{"subj":"T5","pred":"source","obj":"ggdb-test"},{"subj":"T6","pred":"source","obj":"ggdb-test"}]},{"project":"GGDB-2020","denotations":[{"id":"T1","span":{"begin":132,"end":142},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"T2","span":{"begin":253,"end":263},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"T3","span":{"begin":303,"end":313},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"T4","span":{"begin":455,"end":465},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"T5","span":{"begin":581,"end":591},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"T6","span":{"begin":817,"end":827},"obj":"https://acgg.asia/db/ggdb/info/gg098"}],"attributes":[{"subj":"T1","pred":"source","obj":"GGDB-2020"},{"subj":"T2","pred":"source","obj":"GGDB-2020"},{"subj":"T3","pred":"source","obj":"GGDB-2020"},{"subj":"T4","pred":"source","obj":"GGDB-2020"},{"subj":"T5","pred":"source","obj":"GGDB-2020"},{"subj":"T6","pred":"source","obj":"GGDB-2020"}]},{"project":"glycogenes","denotations":[{"id":"PD-GlycoGenes20190927-B_T1","span":{"begin":64,"end":120},"obj":"https://acgg.asia/db/ggdb/info/gg095"},{"id":"PD-GlycoGenes20190927-B_T2","span":{"begin":64,"end":120},"obj":"https://acgg.asia/db/ggdb/info/gg094"},{"id":"PD-GlycoGenes20190927-B_T3","span":{"begin":64,"end":120},"obj":"https://acgg.asia/db/ggdb/info/gg093"},{"id":"PD-GlycoGenes20190927-B_T4","span":{"begin":64,"end":120},"obj":"https://acgg.asia/db/ggdb/info/gg092"},{"id":"PD-GlycoGenes20190927-B_T5","span":{"begin":64,"end":120},"obj":"https://acgg.asia/db/ggdb/info/gg091"},{"id":"PD-GlycoGenes20190927-B_T6","span":{"begin":64,"end":120},"obj":"https://acgg.asia/db/ggdb/info/gg090"},{"id":"PD-GlycoGenes20190927-B_T7","span":{"begin":64,"end":120},"obj":"https://acgg.asia/db/ggdb/info/gg089"},{"id":"PD-GlycoGenes20190927-B_T8","span":{"begin":64,"end":120},"obj":"https://acgg.asia/db/ggdb/info/gg088"},{"id":"PD-GlycoGenes20190927-B_T9","span":{"begin":64,"end":120},"obj":"https://acgg.asia/db/ggdb/info/gg087"},{"id":"PD-GlycoGenes20190927-B_T10","span":{"begin":132,"end":142},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"PD-GlycoGenes20190927-B_T11","span":{"begin":178,"end":234},"obj":"https://acgg.asia/db/ggdb/info/gg095"},{"id":"PD-GlycoGenes20190927-B_T12","span":{"begin":178,"end":234},"obj":"https://acgg.asia/db/ggdb/info/gg094"},{"id":"PD-GlycoGenes20190927-B_T13","span":{"begin":178,"end":234},"obj":"https://acgg.asia/db/ggdb/info/gg093"},{"id":"PD-GlycoGenes20190927-B_T14","span":{"begin":178,"end":234},"obj":"https://acgg.asia/db/ggdb/info/gg092"},{"id":"PD-GlycoGenes20190927-B_T15","span":{"begin":178,"end":234},"obj":"https://acgg.asia/db/ggdb/info/gg091"},{"id":"PD-GlycoGenes20190927-B_T16","span":{"begin":178,"end":234},"obj":"https://acgg.asia/db/ggdb/info/gg090"},{"id":"PD-GlycoGenes20190927-B_T17","span":{"begin":178,"end":234},"obj":"https://acgg.asia/db/ggdb/info/gg089"},{"id":"PD-GlycoGenes20190927-B_T18","span":{"begin":178,"end":234},"obj":"https://acgg.asia/db/ggdb/info/gg088"},{"id":"PD-GlycoGenes20190927-B_T19","span":{"begin":178,"end":234},"obj":"https://acgg.asia/db/ggdb/info/gg087"},{"id":"PD-GlycoGenes20190927-B_T20","span":{"begin":239,"end":247},"obj":"https://acgg.asia/db/ggdb/info/gg104"},{"id":"PD-GlycoGenes20190927-B_T21","span":{"begin":253,"end":263},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"PD-GlycoGenes20190927-B_T22","span":{"begin":303,"end":313},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"PD-GlycoGenes20190927-B_T23","span":{"begin":350,"end":358},"obj":"https://acgg.asia/db/ggdb/info/gg104"},{"id":"PD-GlycoGenes20190927-B_T24","span":{"begin":455,"end":465},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"PD-GlycoGenes20190927-B_T25","span":{"begin":581,"end":591},"obj":"https://acgg.asia/db/ggdb/info/gg098"},{"id":"PD-GlycoGenes20190927-B_T26","span":{"begin":817,"end":827},"obj":"https://acgg.asia/db/ggdb/info/gg098"}],"attributes":[{"subj":"PD-GlycoGenes20190927-B_T1","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T2","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T3","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T4","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T5","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T6","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T7","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T8","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T9","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T10","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T11","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T12","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T13","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T14","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T15","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T16","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T17","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T18","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T19","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T20","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T21","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T22","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T23","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T24","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T25","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T26","pred":"source","obj":"glycogenes"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"ggdb-test","color":"#b193ec","default":true},{"id":"GGDB-2020","color":"#93ec97"},{"id":"glycogenes","color":"#ec93a8"}]}]}}