PubMed:12042244 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/12042244","sourcedb":"PubMed","sourceid":"12042244","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/12042244","text":"Protein glycosylation: nature, distribution, enzymatic formation, and disease implications of glycopeptide bonds.\nFormation of the sugar-amino acid linkage is a crucial event in the biosynthesis of the carbohydrate units of glycoproteins. It sets into motion a complex series of posttranslational enzymatic steps that lead to the formation of a host of protein-bound oligosaccharides with diverse biological functions. These reactions occur throughout the entire phylogenetic spectrum, ranging from archaea and eubacteria to eukaryotes. It is the aim of this review to describe the glycopeptide linkages that have been found to date and specify their presence on well-characterized glycoproteins. A survey is also made of the enzymes involved in the formation of the various glycopeptide bonds as well as the site of their intracellular action and their affinity for particular peptide domains is evaluated. This examination indicates that 13 different monosaccharides and 8 amino acids are involved in glycoprotein linkages leading to a total of at least 41 bonds, if the anomeric configurations, the phosphoglycosyl linkages, as well as the GPI (glycophosphatidylinositol) phosphoethanolamine bridge are also considered. These bonds represent the products of N- and O-glycosylation, C-mannosylation, phosphoglycation, and glypiation. Currently at least 16 enzymes involved in their formation have been identified and in many cases cloned. Their intracellular site of action varies and includes the endoplasmic reticulum, Golgi apparatus, cytosol, and nucleus. With the exception of the Asn-linked carbohydrate and the GPI anchor, which are transferred to the polypeptide en bloc, the sugar-amino acid linkages are formed by the enzymatic transfer of an activated monosaccharide directly to the protein. This review also deals briefly with glycosidases, which are involved in physiologically important cleavages of glycopeptide bonds in higher organisms, and with a number of human disease states in which defects in enzymatic transfer of saccharides to protein have been implicated.","tracks":[{"project":"performance-test","denotations":[{"id":"PD-UBERON-AE-B_T1","span":{"begin":1945,"end":1954},"obj":"http://purl.obolibrary.org/obo/UBERON_0000062"}],"attributes":[{"subj":"PD-UBERON-AE-B_T1","pred":"source","obj":"performance-test"}]},{"project":"uniprot-human","denotations":[{"id":"T1","span":{"begin":1143,"end":1146},"obj":"http://www.uniprot.org/uniprot/P06744"},{"id":"T2","span":{"begin":1620,"end":1623},"obj":"http://www.uniprot.org/uniprot/P06744"}],"attributes":[{"subj":"T1","pred":"source","obj":"uniprot-human"},{"subj":"T2","pred":"source","obj":"uniprot-human"}]},{"project":"GlycoBiology-FMA","denotations":[{"id":"_T1","span":{"begin":0,"end":7},"obj":"FMAID:165447"},{"id":"_T2","span":{"begin":0,"end":7},"obj":"FMAID:67257"},{"id":"_T3","span":{"begin":94,"end":106},"obj":"FMAID:196778"},{"id":"_T4","span":{"begin":94,"end":106},"obj":"FMAID:82784"},{"id":"_T5","span":{"begin":131,"end":136},"obj":"FMAID:196724"},{"id":"_T6","span":{"begin":137,"end":147},"obj":"FMAID:82739"},{"id":"_T7","span":{"begin":137,"end":147},"obj":"FMAID:196728"},{"id":"_T8","span":{"begin":202,"end":214},"obj":"FMAID:82737"},{"id":"_T9","span":{"begin":202,"end":214},"obj":"FMAID:197276"},{"id":"_T10","span":{"begin":224,"end":237},"obj":"FMAID:62925"},{"id":"_T11","span":{"begin":224,"end":237},"obj":"FMAID:167256"},{"id":"_T12","span":{"begin":353,"end":360},"obj":"FMAID:67257"},{"id":"_T13","span":{"begin":353,"end":360},"obj":"FMAID:165447"},{"id":"_T14","span":{"begin":367,"end":383},"obj":"FMAID:196731"},{"id":"_T15","span":{"begin":367,"end":383},"obj":"FMAID:82742"},{"id":"_T16","span":{"begin":582,"end":594},"obj":"FMAID:82784"},{"id":"_T17","span":{"begin":582,"end":594},"obj":"FMAID:196778"},{"id":"_T18","span":{"begin":682,"end":695},"obj":"FMAID:62925"},{"id":"_T19","span":{"begin":682,"end":695},"obj":"FMAID:167256"},{"id":"_T20","span":{"begin":775,"end":787},"obj":"FMAID:82784"},{"id":"_T21","span":{"begin":775,"end":787},"obj":"FMAID:196778"},{"id":"_T22","span":{"begin":823,"end":843},"obj":"FMAID:67946"},{"id":"_T23","span":{"begin":823,"end":843},"obj":"FMAID:165931"},{"id":"_T24","span":{"begin":953,"end":968},"obj":"FMAID:196730"},{"id":"_T25","span":{"begin":953,"end":968},"obj":"FMAID:82741"},{"id":"_T26","span":{"begin":975,"end":986},"obj":"FMAID:196728"},{"id":"_T27","span":{"begin":975,"end":986},"obj":"FMAID:82739"},{"id":"_T28","span":{"begin":1003,"end":1015},"obj":"FMAID:167256"},{"id":"_T29","span":{"begin":1003,"end":1015},"obj":"FMAID:62925"},{"id":"_T30","span":{"begin":1148,"end":1173},"obj":"FMAID:196801"},{"id":"_T31","span":{"begin":1148,"end":1173},"obj":"FMAID:199790"},{"id":"_T32","span":{"begin":1148,"end":1173},"obj":"FMAID:85436"},{"id":"_T33","span":{"begin":1148,"end":1173},"obj":"FMAID:82806"},{"id":"_T34","span":{"begin":1175,"end":1194},"obj":"FMAID:199787"},{"id":"_T59","span":{"begin":1512,"end":1521},"obj":"FMAID:7646"},{"id":"_T35","span":{"begin":1175,"end":1194},"obj":"FMAID:196775"},{"id":"_T36","span":{"begin":1175,"end":1194},"obj":"FMAID:82781"},{"id":"_T37","span":{"begin":1500,"end":1511},"obj":"FMAID:165003"},{"id":"_T38","span":{"begin":1500,"end":1511},"obj":"FMAID:66856"},{"id":"_T39","span":{"begin":1500,"end":1521},"obj":"FMAID:211269"},{"id":"_T40","span":{"begin":1500,"end":1521},"obj":"FMAID:165142"},{"id":"_T41","span":{"begin":1500,"end":1521},"obj":"FMAID:67438"},{"id":"_T42","span":{"begin":1500,"end":1521},"obj":"FMAID:165141"},{"id":"_T43","span":{"begin":1500,"end":1521},"obj":"FMAID:67434"},{"id":"_T44","span":{"begin":1500,"end":1521},"obj":"FMAID:165144"},{"id":"_T45","span":{"begin":1500,"end":1521},"obj":"FMAID:210694"},{"id":"_T46","span":{"begin":1500,"end":1521},"obj":"FMAID:66897"},{"id":"_T47","span":{"begin":1500,"end":1521},"obj":"FMAID:210679"},{"id":"_T48","span":{"begin":1500,"end":1521},"obj":"FMAID:199093"},{"id":"_T49","span":{"begin":1500,"end":1521},"obj":"FMAID:165250"},{"id":"_T50","span":{"begin":1500,"end":1521},"obj":"FMAID:67429"},{"id":"_T51","span":{"begin":1500,"end":1521},"obj":"FMAID:165026"},{"id":"_T52","span":{"begin":1500,"end":1521},"obj":"FMAID:165027"},{"id":"_T53","span":{"begin":1500,"end":1521},"obj":"FMAID:212510"},{"id":"_T54","span":{"begin":1500,"end":1521},"obj":"FMAID:162308"},{"id":"_T55","span":{"begin":1500,"end":1521},"obj":"FMAID:66898"},{"id":"_T56","span":{"begin":1500,"end":1521},"obj":"FMAID:188464"},{"id":"_T57","span":{"begin":1500,"end":1521},"obj":"FMAID:63842"},{"id":"_T58","span":{"begin":1500,"end":1521},"obj":"FMAID:80351"},{"id":"_T60","span":{"begin":1512,"end":1521},"obj":"FMAID:94520"},{"id":"_T61","span":{"begin":1523,"end":1538},"obj":"FMAID:162311"},{"id":"_T62","span":{"begin":1540,"end":1547},"obj":"FMAID:256055"},{"id":"_T63","span":{"begin":1599,"end":1611},"obj":"FMAID:197276"},{"id":"_T64","span":{"begin":1599,"end":1611},"obj":"FMAID:82737"},{"id":"_T65","span":{"begin":1686,"end":1691},"obj":"FMAID:196724"},{"id":"_T66","span":{"begin":1692,"end":1702},"obj":"FMAID:82739"},{"id":"_T67","span":{"begin":1692,"end":1702},"obj":"FMAID:196728"},{"id":"_T68","span":{"begin":1765,"end":1779},"obj":"FMAID:196730"},{"id":"_T69","span":{"begin":1765,"end":1779},"obj":"FMAID:82741"},{"id":"_T70","span":{"begin":1796,"end":1803},"obj":"FMAID:67257"},{"id":"_T71","span":{"begin":1796,"end":1803},"obj":"FMAID:165447"},{"id":"_T72","span":{"begin":1916,"end":1928},"obj":"FMAID:196778"},{"id":"_T73","span":{"begin":1916,"end":1928},"obj":"FMAID:82784"},{"id":"_T74","span":{"begin":1945,"end":1954},"obj":"FMAID:67498"},{"id":"_T75","span":{"begin":1945,"end":1954},"obj":"FMAID:166081"},{"id":"_T76","span":{"begin":2040,"end":2051},"obj":"FMAID:82744"},{"id":"_T77","span":{"begin":2040,"end":2051},"obj":"FMAID:196733"},{"id":"_T78","span":{"begin":2055,"end":2062},"obj":"FMAID:67257"},{"id":"_T79","span":{"begin":2055,"end":2062},"obj":"FMAID:165447"}],"namespaces":[{"prefix":"FMAID","uri":"http://purl.org/sig/ont/fma/fma"}],"attributes":[{"subj":"_T1","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T2","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T3","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T4","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T5","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T6","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T7","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T8","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T9","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T10","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T11","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T12","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T13","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T14","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T15","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T16","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T17","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T18","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T19","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T20","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T21","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T22","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T23","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T24","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T25","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T26","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T27","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T28","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T29","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T30","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T31","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T32","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T33","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T34","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T59","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T35","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T36","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T37","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T38","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T39","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T40","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T41","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T42","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T43","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T44","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T45","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T46","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T47","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T48","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T49","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T50","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T51","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T52","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T53","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T54","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T55","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T56","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T57","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T58","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T60","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T61","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T62","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T63","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T64","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T65","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T66","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T67","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T68","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T69","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T70","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T71","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T72","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T73","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T74","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T75","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T76","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T77","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T78","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T79","pred":"source","obj":"GlycoBiology-FMA"}]},{"project":"uniprot-mouse","denotations":[{"id":"T1","span":{"begin":1143,"end":1146},"obj":"http://www.uniprot.org/uniprot/Q8C675"},{"id":"T2","span":{"begin":1620,"end":1623},"obj":"http://www.uniprot.org/uniprot/Q8C675"},{"id":"T3","span":{"begin":1588,"end":1591},"obj":"http://www.uniprot.org/uniprot/Q61024"}],"attributes":[{"subj":"T1","pred":"source","obj":"uniprot-mouse"},{"subj":"T2","pred":"source","obj":"uniprot-mouse"},{"subj":"T3","pred":"source","obj":"uniprot-mouse"}]},{"project":"GlycoBiology-NCBITAXON","denotations":[{"id":"T1","span":{"begin":169,"end":174},"obj":"http://purl.bioontology.org/ontology/STY/T051"},{"id":"T2","span":{"begin":397,"end":417},"obj":"http://purl.bioontology.org/ontology/STY/T039"},{"id":"T3","span":{"begin":499,"end":506},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/2157"},{"id":"T4","span":{"begin":525,"end":535},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/2759"},{"id":"T5","span":{"begin":1422,"end":1426},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/9973"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T2","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T3","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T4","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T5","pred":"source","obj":"GlycoBiology-NCBITAXON"}]},{"project":"sentences","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":113},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":114,"end":238},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":239,"end":418},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":419,"end":536},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":537,"end":696},"obj":"Sentence"},{"id":"TextSentencer_T6","span":{"begin":697,"end":907},"obj":"Sentence"},{"id":"TextSentencer_T7","span":{"begin":908,"end":1222},"obj":"Sentence"},{"id":"TextSentencer_T8","span":{"begin":1223,"end":1335},"obj":"Sentence"},{"id":"TextSentencer_T9","span":{"begin":1336,"end":1440},"obj":"Sentence"},{"id":"TextSentencer_T10","span":{"begin":1441,"end":1561},"obj":"Sentence"},{"id":"TextSentencer_T11","span":{"begin":1562,"end":1804},"obj":"Sentence"},{"id":"TextSentencer_T12","span":{"begin":1805,"end":2084},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":113},"obj":"Sentence"},{"id":"T2","span":{"begin":114,"end":238},"obj":"Sentence"},{"id":"T3","span":{"begin":239,"end":418},"obj":"Sentence"},{"id":"T4","span":{"begin":419,"end":536},"obj":"Sentence"},{"id":"T5","span":{"begin":537,"end":696},"obj":"Sentence"},{"id":"T6","span":{"begin":697,"end":907},"obj":"Sentence"},{"id":"T7","span":{"begin":908,"end":1222},"obj":"Sentence"},{"id":"T8","span":{"begin":1223,"end":1335},"obj":"Sentence"},{"id":"T9","span":{"begin":1336,"end":1440},"obj":"Sentence"},{"id":"T10","span":{"begin":1441,"end":1561},"obj":"Sentence"},{"id":"T11","span":{"begin":1562,"end":1804},"obj":"Sentence"},{"id":"T12","span":{"begin":1805,"end":2084},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":113},"obj":"Sentence"},{"id":"T2","span":{"begin":114,"end":238},"obj":"Sentence"},{"id":"T3","span":{"begin":239,"end":418},"obj":"Sentence"},{"id":"T4","span":{"begin":419,"end":536},"obj":"Sentence"},{"id":"T5","span":{"begin":537,"end":696},"obj":"Sentence"},{"id":"T6","span":{"begin":697,"end":907},"obj":"Sentence"},{"id":"T7","span":{"begin":908,"end":1222},"obj":"Sentence"},{"id":"T8","span":{"begin":1223,"end":1335},"obj":"Sentence"},{"id":"T9","span":{"begin":1336,"end":1440},"obj":"Sentence"},{"id":"T10","span":{"begin":1441,"end":1561},"obj":"Sentence"},{"id":"T11","span":{"begin":1562,"end":1804},"obj":"Sentence"},{"id":"T12","span":{"begin":1805,"end":2084},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"TextSentencer_T1","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T2","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T3","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T4","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T5","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T6","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T7","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T8","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T9","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T10","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T11","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T12","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"},{"subj":"T10","pred":"source","obj":"sentences"},{"subj":"T11","pred":"source","obj":"sentences"},{"subj":"T12","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"},{"subj":"T10","pred":"source","obj":"sentences"},{"subj":"T11","pred":"source","obj":"sentences"},{"subj":"T12","pred":"source","obj":"sentences"}]},{"project":"GO-BP","denotations":[{"id":"T1","span":{"begin":0,"end":21},"obj":"http://purl.obolibrary.org/obo/GO_0006486"},{"id":"T2","span":{"begin":8,"end":21},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T3","span":{"begin":1270,"end":1283},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T4","span":{"begin":55,"end":64},"obj":"http://purl.obolibrary.org/obo/GO_0009058"},{"id":"T5","span":{"begin":330,"end":339},"obj":"http://purl.obolibrary.org/obo/GO_0009058"},{"id":"T6","span":{"begin":750,"end":759},"obj":"http://purl.obolibrary.org/obo/GO_0009058"},{"id":"T7","span":{"begin":114,"end":123},"obj":"http://purl.obolibrary.org/obo/GO_0009058"},{"id":"T8","span":{"begin":114,"end":142},"obj":"http://purl.obolibrary.org/obo/GO_0046349"},{"id":"T9","span":{"begin":182,"end":194},"obj":"http://purl.obolibrary.org/obo/GO_0009058"},{"id":"T10","span":{"begin":182,"end":214},"obj":"http://purl.obolibrary.org/obo/GO_0016051"},{"id":"T11","span":{"begin":1102,"end":1117},"obj":"http://purl.obolibrary.org/obo/GO_0042076"},{"id":"T12","span":{"begin":1287,"end":1300},"obj":"http://purl.obolibrary.org/obo/GO_0097502"},{"id":"T13","span":{"begin":1500,"end":1528},"obj":"http://purl.obolibrary.org/obo/GO_0006888"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-BP"},{"subj":"T2","pred":"source","obj":"GO-BP"},{"subj":"T3","pred":"source","obj":"GO-BP"},{"subj":"T4","pred":"source","obj":"GO-BP"},{"subj":"T5","pred":"source","obj":"GO-BP"},{"subj":"T6","pred":"source","obj":"GO-BP"},{"subj":"T7","pred":"source","obj":"GO-BP"},{"subj":"T8","pred":"source","obj":"GO-BP"},{"subj":"T9","pred":"source","obj":"GO-BP"},{"subj":"T10","pred":"source","obj":"GO-BP"},{"subj":"T11","pred":"source","obj":"GO-BP"},{"subj":"T12","pred":"source","obj":"GO-BP"},{"subj":"T13","pred":"source","obj":"GO-BP"}]},{"project":"GO-MF","denotations":[{"id":"T1","span":{"begin":1624,"end":1630},"obj":"http://purl.obolibrary.org/obo/GO_0043495"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-MF"}]},{"project":"GO-CC","denotations":[{"id":"T1","span":{"begin":345,"end":349},"obj":"http://purl.obolibrary.org/obo/GO_0018995"},{"id":"T2","span":{"begin":823,"end":836},"obj":"http://purl.obolibrary.org/obo/GO_0005622"},{"id":"T3","span":{"begin":1447,"end":1460},"obj":"http://purl.obolibrary.org/obo/GO_0005622"},{"id":"T4","span":{"begin":1500,"end":1521},"obj":"http://purl.obolibrary.org/obo/GO_0005783"},{"id":"T5","span":{"begin":1523,"end":1528},"obj":"http://purl.obolibrary.org/obo/GO_0005794"},{"id":"T6","span":{"begin":1523,"end":1538},"obj":"http://purl.obolibrary.org/obo/GO_0005794"},{"id":"T7","span":{"begin":1540,"end":1547},"obj":"http://purl.obolibrary.org/obo/GO_0005829"},{"id":"T8","span":{"begin":1553,"end":1560},"obj":"http://purl.obolibrary.org/obo/GO_0005634"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-CC"},{"subj":"T2","pred":"source","obj":"GO-CC"},{"subj":"T3","pred":"source","obj":"GO-CC"},{"subj":"T4","pred":"source","obj":"GO-CC"},{"subj":"T5","pred":"source","obj":"GO-CC"},{"subj":"T6","pred":"source","obj":"GO-CC"},{"subj":"T7","pred":"source","obj":"GO-CC"},{"subj":"T8","pred":"source","obj":"GO-CC"}]},{"project":"UBERON-AE","denotations":[{"id":"T1","span":{"begin":1945,"end":1954},"obj":"http://purl.obolibrary.org/obo/UBERON_0000062"}],"attributes":[{"subj":"T1","pred":"source","obj":"UBERON-AE"}]},{"project":"EDAM-topics","denotations":[{"id":"T1","span":{"begin":0,"end":7},"obj":"http://edamontology.org/topic_0078"},{"id":"T2","span":{"begin":70,"end":77},"obj":"http://edamontology.org/topic_0634"},{"id":"T3","span":{"begin":137,"end":147},"obj":"http://edamontology.org/topic_0154"},{"id":"T4","span":{"begin":148,"end":155},"obj":"http://edamontology.org/topic_0102"},{"id":"T5","span":{"begin":202,"end":214},"obj":"http://edamontology.org/topic_0152"},{"id":"T6","span":{"begin":353,"end":360},"obj":"http://edamontology.org/topic_0078"},{"id":"T7","span":{"begin":463,"end":475},"obj":"http://edamontology.org/topic_3293"},{"id":"T8","span":{"begin":525,"end":535},"obj":"http://edamontology.org/topic_2818"},{"id":"T9","span":{"begin":595,"end":603},"obj":"http://edamontology.org/topic_0102"},{"id":"T10","span":{"begin":878,"end":885},"obj":"http://edamontology.org/topic_0154"},{"id":"T11","span":{"begin":975,"end":986},"obj":"http://edamontology.org/topic_0154"},{"id":"T12","span":{"begin":1016,"end":1024},"obj":"http://edamontology.org/topic_0102"},{"id":"T13","span":{"begin":1118,"end":1126},"obj":"http://edamontology.org/topic_0102"},{"id":"T14","span":{"begin":1500,"end":1521},"obj":"http://edamontology.org/topic_0616"},{"id":"T15","span":{"begin":1523,"end":1538},"obj":"http://edamontology.org/topic_0616"},{"id":"T16","span":{"begin":1553,"end":1560},"obj":"http://edamontology.org/topic_0616"},{"id":"T17","span":{"begin":1599,"end":1611},"obj":"http://edamontology.org/topic_0152"},{"id":"T18","span":{"begin":1692,"end":1702},"obj":"http://edamontology.org/topic_0154"},{"id":"T19","span":{"begin":1703,"end":1711},"obj":"http://edamontology.org/topic_0102"},{"id":"T20","span":{"begin":1796,"end":1803},"obj":"http://edamontology.org/topic_0078"},{"id":"T21","span":{"begin":1877,"end":1892},"obj":"http://edamontology.org/topic_3300"},{"id":"T22","span":{"begin":1977,"end":1982},"obj":"http://edamontology.org/topic_2815"},{"id":"T23","span":{"begin":1977,"end":1990},"obj":"http://edamontology.org/topic_0803"},{"id":"T24","span":{"begin":1983,"end":1990},"obj":"http://edamontology.org/topic_0634"},{"id":"T25","span":{"begin":2055,"end":2062},"obj":"http://edamontology.org/topic_0078"}],"attributes":[{"subj":"T1","pred":"source","obj":"EDAM-topics"},{"subj":"T2","pred":"source","obj":"EDAM-topics"},{"subj":"T3","pred":"source","obj":"EDAM-topics"},{"subj":"T4","pred":"source","obj":"EDAM-topics"},{"subj":"T5","pred":"source","obj":"EDAM-topics"},{"subj":"T6","pred":"source","obj":"EDAM-topics"},{"subj":"T7","pred":"source","obj":"EDAM-topics"},{"subj":"T8","pred":"source","obj":"EDAM-topics"},{"subj":"T9","pred":"source","obj":"EDAM-topics"},{"subj":"T10","pred":"source","obj":"EDAM-topics"},{"subj":"T11","pred":"source","obj":"EDAM-topics"},{"subj":"T12","pred":"source","obj":"EDAM-topics"},{"subj":"T13","pred":"source","obj":"EDAM-topics"},{"subj":"T14","pred":"source","obj":"EDAM-topics"},{"subj":"T15","pred":"source","obj":"EDAM-topics"},{"subj":"T16","pred":"source","obj":"EDAM-topics"},{"subj":"T17","pred":"source","obj":"EDAM-topics"},{"subj":"T18","pred":"source","obj":"EDAM-topics"},{"subj":"T19","pred":"source","obj":"EDAM-topics"},{"subj":"T20","pred":"source","obj":"EDAM-topics"},{"subj":"T21","pred":"source","obj":"EDAM-topics"},{"subj":"T22","pred":"source","obj":"EDAM-topics"},{"subj":"T23","pred":"source","obj":"EDAM-topics"},{"subj":"T24","pred":"source","obj":"EDAM-topics"},{"subj":"T25","pred":"source","obj":"EDAM-topics"}]},{"project":"EDAM-DFO","denotations":[{"id":"T1","span":{"begin":0,"end":7},"obj":"http://edamontology.org/format_1208"},{"id":"T2","span":{"begin":0,"end":7},"obj":"http://edamontology.org/data_1467"},{"id":"T3","span":{"begin":55,"end":64},"obj":"http://edamontology.org/operation_0335"},{"id":"T4","span":{"begin":55,"end":64},"obj":"http://edamontology.org/format_1915"},{"id":"T5","span":{"begin":114,"end":123},"obj":"http://edamontology.org/operation_0335"},{"id":"T6","span":{"begin":114,"end":123},"obj":"http://edamontology.org/format_1915"},{"id":"T7","span":{"begin":330,"end":339},"obj":"http://edamontology.org/format_1915"},{"id":"T8","span":{"begin":330,"end":339},"obj":"http://edamontology.org/operation_0335"},{"id":"T9","span":{"begin":353,"end":360},"obj":"http://edamontology.org/data_1467"},{"id":"T10","span":{"begin":353,"end":360},"obj":"http://edamontology.org/format_1208"},{"id":"T11","span":{"begin":408,"end":417},"obj":"http://edamontology.org/operation_0004"},{"id":"T12","span":{"begin":476,"end":484},"obj":"http://edamontology.org/data_3483"},{"id":"T13","span":{"begin":628,"end":632},"obj":"http://edamontology.org/data_2156"},{"id":"T14","span":{"begin":750,"end":759},"obj":"http://edamontology.org/format_1915"},{"id":"T15","span":{"begin":750,"end":759},"obj":"http://edamontology.org/operation_0335"},{"id":"T16","span":{"begin":878,"end":885},"obj":"http://edamontology.org/data_2906"},{"id":"T17","span":{"begin":953,"end":968},"obj":"http://edamontology.org/data_2746"},{"id":"T18","span":{"begin":1384,"end":1393},"obj":"http://edamontology.org/operation_0335"},{"id":"T19","span":{"begin":1384,"end":1393},"obj":"http://edamontology.org/format_1915"},{"id":"T20","span":{"begin":1404,"end":1414},"obj":"http://edamontology.org/data_2611"},{"id":"T21","span":{"begin":1404,"end":1414},"obj":"http://edamontology.org/data_0842"},{"id":"T22","span":{"begin":1765,"end":1779},"obj":"http://edamontology.org/data_2746"},{"id":"T23","span":{"begin":1796,"end":1803},"obj":"http://edamontology.org/format_1208"},{"id":"T24","span":{"begin":1796,"end":1803},"obj":"http://edamontology.org/data_1467"},{"id":"T25","span":{"begin":2055,"end":2062},"obj":"http://edamontology.org/data_1467"},{"id":"T26","span":{"begin":2055,"end":2062},"obj":"http://edamontology.org/format_1208"}],"attributes":[{"subj":"T1","pred":"source","obj":"EDAM-DFO"},{"subj":"T2","pred":"source","obj":"EDAM-DFO"},{"subj":"T3","pred":"source","obj":"EDAM-DFO"},{"subj":"T4","pred":"source","obj":"EDAM-DFO"},{"subj":"T5","pred":"source","obj":"EDAM-DFO"},{"subj":"T6","pred":"source","obj":"EDAM-DFO"},{"subj":"T7","pred":"source","obj":"EDAM-DFO"},{"subj":"T8","pred":"source","obj":"EDAM-DFO"},{"subj":"T9","pred":"source","obj":"EDAM-DFO"},{"subj":"T10","pred":"source","obj":"EDAM-DFO"},{"subj":"T11","pred":"source","obj":"EDAM-DFO"},{"subj":"T12","pred":"source","obj":"EDAM-DFO"},{"subj":"T13","pred":"source","obj":"EDAM-DFO"},{"subj":"T14","pred":"source","obj":"EDAM-DFO"},{"subj":"T15","pred":"source","obj":"EDAM-DFO"},{"subj":"T16","pred":"source","obj":"EDAM-DFO"},{"subj":"T17","pred":"source","obj":"EDAM-DFO"},{"subj":"T18","pred":"source","obj":"EDAM-DFO"},{"subj":"T19","pred":"source","obj":"EDAM-DFO"},{"subj":"T20","pred":"source","obj":"EDAM-DFO"},{"subj":"T21","pred":"source","obj":"EDAM-DFO"},{"subj":"T22","pred":"source","obj":"EDAM-DFO"},{"subj":"T23","pred":"source","obj":"EDAM-DFO"},{"subj":"T24","pred":"source","obj":"EDAM-DFO"},{"subj":"T25","pred":"source","obj":"EDAM-DFO"},{"subj":"T26","pred":"source","obj":"EDAM-DFO"}]},{"project":"NCBITAXON","denotations":[{"id":"T1","span":{"begin":499,"end":506},"obj":"OrganismTaxon"},{"id":"T2","span":{"begin":525,"end":535},"obj":"OrganismTaxon"},{"id":"T3","span":{"begin":1977,"end":1982},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"2157"},{"id":"A2","pred":"db_id","subj":"T2","obj":"2759"},{"id":"A3","pred":"db_id","subj":"T3","obj":"9606"},{"subj":"T1","pred":"source","obj":"NCBITAXON"},{"subj":"T2","pred":"source","obj":"NCBITAXON"},{"subj":"T3","pred":"source","obj":"NCBITAXON"}]},{"project":"GlyTouCan-IUPAC","denotations":[{"id":"GlycanIUPAC_T1","span":{"begin":131,"end":136},"obj":"\"http://rdf.glycoinfo.org/glycan/G59665TO\""},{"id":"GlycanIUPAC_T2","span":{"begin":1686,"end":1691},"obj":"\"http://rdf.glycoinfo.org/glycan/G59665TO\""},{"id":"GlycanIUPAC_T3","span":{"begin":131,"end":136},"obj":"\"http://rdf.glycoinfo.org/glycan/G32915EI\""},{"id":"GlycanIUPAC_T4","span":{"begin":1686,"end":1691},"obj":"\"http://rdf.glycoinfo.org/glycan/G32915EI\""},{"id":"GlycanIUPAC_T5","span":{"begin":131,"end":136},"obj":"\"http://rdf.glycoinfo.org/glycan/G60625TS\""},{"id":"GlycanIUPAC_T6","span":{"begin":1686,"end":1691},"obj":"\"http://rdf.glycoinfo.org/glycan/G60625TS\""}],"attributes":[{"subj":"GlycanIUPAC_T1","pred":"source","obj":"GlyTouCan-IUPAC"},{"subj":"GlycanIUPAC_T2","pred":"source","obj":"GlyTouCan-IUPAC"},{"subj":"GlycanIUPAC_T3","pred":"source","obj":"GlyTouCan-IUPAC"},{"subj":"GlycanIUPAC_T4","pred":"source","obj":"GlyTouCan-IUPAC"},{"subj":"GlycanIUPAC_T5","pred":"source","obj":"GlyTouCan-IUPAC"},{"subj":"GlycanIUPAC_T6","pred":"source","obj":"GlyTouCan-IUPAC"}]},{"project":"GlycoBiology-Motifs","denotations":[{"id":"T1","span":{"begin":1620,"end":1630},"obj":"http://rdf.glycoinfo.org/glycan/G00045MO"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlycoBiology-Motifs"}]},{"project":"Anatomy-UBERON","denotations":[{"id":"T1","span":{"begin":823,"end":836},"obj":"Body_part"},{"id":"T2","span":{"begin":1447,"end":1460},"obj":"Body_part"},{"id":"T3","span":{"begin":1512,"end":1521},"obj":"Body_part"},{"id":"T4","span":{"begin":1523,"end":1538},"obj":"Body_part"},{"id":"T5","span":{"begin":1540,"end":1547},"obj":"Body_part"},{"id":"T6","span":{"begin":1553,"end":1560},"obj":"Body_part"},{"id":"T8","span":{"begin":1945,"end":1954},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/GO_0005622"},{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/GO_0005622"},{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0007361"},{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/GO_0005794"},{"id":"A5","pred":"uberon_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/GO_0005829"},{"id":"A6","pred":"uberon_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/GO_0005634"},{"id":"A7","pred":"uberon_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/UBERON_0000125"},{"id":"A8","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/UBERON_0000468"},{"subj":"T1","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T2","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T3","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T4","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T5","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T6","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T8","pred":"source","obj":"Anatomy-UBERON"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"performance-test","color":"#e393ec","default":true},{"id":"uniprot-human","color":"#93ecc9"},{"id":"GlycoBiology-FMA","color":"#ecaf93"},{"id":"uniprot-mouse","color":"#9593ec"},{"id":"GlycoBiology-NCBITAXON","color":"#abec93"},{"id":"sentences","color":"#ec93c5"},{"id":"GO-BP","color":"#93dfec"},{"id":"GO-MF","color":"#ecdf93"},{"id":"GO-CC","color":"#c593ec"},{"id":"UBERON-AE","color":"#93ecab"},{"id":"EDAM-topics","color":"#ec9394"},{"id":"EDAM-DFO","color":"#93aeec"},{"id":"NCBITAXON","color":"#c8ec93"},{"id":"GlyTouCan-IUPAC","color":"#ec93e3"},{"id":"GlycoBiology-Motifs","color":"#93ecdb"},{"id":"Anatomy-UBERON","color":"#ecc193"}]}]}}