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PubMed:11815625 JSONTXT

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GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 1058-1065 Glycan_Motif denotes glucose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G15021LG

sentences

Id Subject Object Predicate Lexical cue
T1 0-51 Sentence denotes Cytokine signaling: STATS in plasma membrane rafts.
T2 52-170 Sentence denotes STAT transcription factors signal from the plasma membrane to the nucleus in response to growth factors and cytokines.
T3 171-274 Sentence denotes We have investigated whether plasma membrane "rafts" are involved in cytokine-activated STAT signaling.
T4 275-637 Sentence denotes Cytokine-free human hepatoma Hep3B cells or cells treated with interleukin-6 (IL-6) or orthovanadate (a general activator of STATs) were fractionated, and plasma membrane raft fractions were obtained by equilibrium sedimentation or flotation through discontinuous sucrose gradients using either non-detergent or detergent-based (saponin or Triton X-100) methods.
T5 638-1107 Sentence denotes By Western blotting the plasma membrane raft fractions obtained using either non-detergent or detergent-based methods contained significant amounts of STAT1 and STAT3 (up to approximately 10% of the total cytoplasmic amount) as well as the integral raft proteins caveolin-1 and flotillin-1, the IL-6-receptor signal transducing chain gp130, the interferon-gamma receptor alpha chain (IFN-gammaRalpha), and the chaperone glucose-regulated protein 58 (GRP58/ER-60/ERp57).
T6 1108-1301 Sentence denotes Upon activation of signaling by IL-6 or orthovanadate the respective Tyr-phosphorylated STAT species were now also observed in the membrane raft fraction but in a form deficient in DNA binding.
T7 1302-1572 Sentence denotes The data show pre-association of STATs with plasma membrane rafts in flotation fractions, which also contained caveolin-1 and flotillin-1, and suggest that Tyr phosphorylation may not in itself be sufficient to cause the departure of PY-STATs from plasma membrane rafts.
T8 1573-1726 Sentence denotes Methyl-beta-cyclodextrin, which sequesters cholesterol and disrupts plasma membrane rafts, markedly inhibited IL-6- and IFN-gamma-induced STAT signaling.
T9 1727-1952 Sentence denotes Signaling through specialized raft microdomains may be a general mechanism operating at the level of the plasma membrane through which cytokines and growth factors activate STAT species (the "raft-STAT signaling hypothesis").

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 1058-1065 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose

FSU-PRGE

Id Subject Object Predicate Lexical cue
T1 0-8 protein denotes Cytokine
T2 20-25 protein denotes STATS
T3 52-56 protein denotes STAT
T4 57-78 protein denotes transcription factors
T5 141-155 protein denotes growth factors
T6 160-169 protein denotes cytokines
T7 240-248 protein denotes cytokine
T8 259-263 protein denotes STAT
T9 275-283 protein denotes Cytokine
T10 338-351 protein denotes interleukin-6
T11 353-357 protein denotes IL-6
T12 400-405 protein denotes STATs
T13 789-794 protein denotes STAT1
T14 799-804 protein denotes STAT3
T15 901-911 protein denotes caveolin-1
T16 916-927 protein denotes flotillin-1
T17 933-971 protein denotes IL-6-receptor signal transducing chain
T18 972-977 protein denotes gp130
T19 983-1020 protein denotes interferon-gamma receptor alpha chain
T20 1022-1037 protein denotes IFN-gammaRalpha
T21 1048-1057 protein denotes chaperone
T22 1058-1086 protein denotes glucose-regulated protein 58
T23 1088-1093 protein denotes GRP58
T24 1094-1099 protein denotes ER-60
T25 1100-1105 protein denotes ERp57
T26 1140-1144 protein denotes IL-6
T27 1196-1200 protein denotes STAT
T28 1335-1340 protein denotes STATs
T29 1413-1423 protein denotes caveolin-1
T30 1428-1439 protein denotes flotillin-1
T31 1539-1544 protein denotes STATs
T32 1683-1687 protein denotes IL-6
T33 1693-1702 protein denotes IFN-gamma
T34 1711-1715 protein denotes STAT
T35 1862-1871 protein denotes cytokines
T36 1876-1890 protein denotes growth factors
T37 1900-1904 protein denotes STAT
T38 1924-1928 protein denotes STAT

PIR-corpus2

Id Subject Object Predicate Lexical cue
T1 0-8 protein denotes Cytokine
T2 20-25 protein denotes STATS
T3 52-78 protein denotes STAT transcription factors
T4 141-155 protein denotes growth factors
T5 160-169 protein denotes cytokines
T6 240-248 protein denotes cytokine
T7 259-263 protein denotes STAT
T8 275-283 protein denotes Cytokine
T9 338-358 protein denotes interleukin-6 (IL-6)
T10 400-405 protein denotes STATs
T11 789-794 protein denotes STAT1
T12 799-804 protein denotes STAT3
T13 878-911 protein denotes integral raft proteins caveolin-1
T14 916-927 protein denotes flotillin-1
T15 933-946 protein denotes IL-6-receptor
T16 972-977 protein denotes gp130
T17 983-1038 protein denotes interferon-gamma receptor alpha chain (IFN-gammaRalpha)
T18 1048-1057 protein denotes chaperone
T19 1088-1093 protein denotes GRP58
T20 1094-1099 protein denotes ER-60
T21 1100-1105 protein denotes ERp57
T22 1140-1144 protein denotes IL-6
T23 1196-1200 protein denotes STAT
T24 1335-1340 protein denotes STATs
T25 1413-1423 protein denotes caveolin-1
T26 1428-1439 protein denotes flotillin-1
T27 1539-1544 protein denotes STATs
T28 1683-1687 protein denotes IL-6
T29 1693-1702 protein denotes IFN-gamma
T30 1711-1715 protein denotes STAT
T31 1862-1871 protein denotes cytokines
T32 1876-1890 protein denotes growth factors
T33 1900-1904 protein denotes STAT
T34 1924-1928 protein denotes STAT

PIR-corpus1

Id Subject Object Predicate Lexical cue
T1 0-8 protein denotes Cytokine
T2 20-25 protein denotes STATS
T3 52-78 protein denotes STAT transcription factors
T4 141-155 protein denotes growth factors
T5 160-169 protein denotes cytokines
T6 240-248 protein denotes cytokine
T7 259-263 protein denotes STAT
T8 275-283 protein denotes Cytokine
T9 338-351 protein denotes interleukin-6
T10 353-357 acronym denotes IL-6
T11 400-405 protein denotes STATs
T12 789-794 protein denotes STAT1
T13 799-804 protein denotes STAT3
T14 892-900 protein denotes proteins
T15 901-911 protein denotes caveolin-1
T16 916-927 protein denotes flotillin-1
T17 933-946 protein denotes IL-6-receptor
T18 972-977 protein denotes gp130
T19 983-1020 protein denotes interferon-gamma receptor alpha chain
T20 1022-1037 acronym denotes IFN-gammaRalpha
T21 1048-1057 protein denotes chaperone
T22 1088-1105 protein denotes GRP58/ER-60/ERp57
T23 1140-1144 protein denotes IL-6
T24 1196-1200 protein denotes STAT
T25 1335-1340 protein denotes STATs
T26 1413-1423 protein denotes caveolin-1
T27 1428-1439 protein denotes flotillin-1
T28 1536-1544 protein denotes PY-STATs
T29 1573-1597 protein denotes Methyl-beta-cyclodextrin
T30 1683-1687 protein denotes IL-6
T31 1693-1702 protein denotes IFN-gamma
T32 1711-1715 protein denotes STAT
T33 1862-1871 protein denotes cytokines
T34 1876-1890 protein denotes growth factors
T35 1900-1904 protein denotes STAT

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 295-303 Disease denotes hepatoma http://purl.obolibrary.org/obo/MONDO_0007256

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 289-294 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 29-44 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T2 95-110 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T3 118-125 Body_part denotes nucleus http://purl.obolibrary.org/obo/GO_0005634|http://purl.obolibrary.org/obo/UBERON_0000125
T5 200-215 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T6 430-445 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T7 662-677 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T8 843-854 Body_part denotes cytoplasmic http://purl.obolibrary.org/obo/GO_0005737
T9 1239-1247 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T12 1346-1361 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T13 1550-1565 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T14 1641-1656 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T15 1832-1847 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886