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PubMed:11747217 JSONTXT

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PubCasesHPO

Id Subject Object Predicate Lexical cue
AB1 146-155 HP:0030731 denotes carcinoma
TI1 23-32 HP:0030731 denotes carcinoma
AB2 267-276 HP:0030731 denotes carcinoma
AB3 443-452 HP:0030731 denotes carcinoma
AB4 640-649 HP:0030731 denotes carcinoma
AB5 969-979 HP:0002835 denotes aspiration
AB6 1402-1412 HP:0030731 denotes carcinomas
AB7 1529-1538 HP:0030731 denotes carcinoma

UBERON-AE

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 40-46 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T2 163-169 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T3 839-845 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T4 1382-1388 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T5 1420-1426 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T6 1546-1552 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T7 2067-2073 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T8 317-328 http://purl.obolibrary.org/obo/UBERON_0003104 denotes mesenchymal
PD-UBERON-AE-B_T9 1048-1059 http://purl.obolibrary.org/obo/UBERON_0003104 denotes mesenchymal
PD-UBERON-AE-B_T10 799-804 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lungs
PD-UBERON-AE-B_T11 951-955 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
PD-UBERON-AE-B_T12 1443-1463 http://purl.obolibrary.org/obo/UBERON_0001097 denotes axillary lymph nodes
PD-UBERON-AE-B_T13 1452-1457 http://purl.obolibrary.org/obo/UBERON_0002391 denotes lymph
PD-UBERON-AE-B_T14 1452-1463 http://purl.obolibrary.org/obo/UBERON_0000029 denotes lymph nodes

PubCasesORDO

Id Subject Object Predicate Lexical cue
AB1 134-169 ORDO:213531 denotes Metaplastic carcinoma of the breast
TI1 11-46 ORDO:213531 denotes metaplastic carcinoma of the breast
AB2 1390-1426 ORDO:213531 denotes Metaplastic carcinomas of the breast
AB3 1517-1552 ORDO:213531 denotes metaplastic carcinoma of the breast

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-133 Sentence denotes Metastatic metaplastic carcinoma of the breast (MCB): an uncharacteristic pattern of presentation with clinicopathologic correlation.
TextSentencer_T2 134-382 Sentence denotes Metaplastic carcinoma of the breast (MCB) is a well recognized but uncommon aberrant manifestation of poorly differentiated invasive carcinoma containing both epithelial (ductal) and mesenchymal elements as well as a transitional form between them.
TextSentencer_T3 383-577 Sentence denotes This heterogeneous tumor characteristically contains ductal carcinoma cells mixed with areas of diverse morphologic phenotype displaying spindle, squamous, chondroid, or osseous differentiation.
TextSentencer_T4 578-706 Sentence denotes Some studies have suggested that certain types of metaplastic carcinoma have a more favorable prognosis as compared with others.
TextSentencer_T5 707-853 Sentence denotes We describe a case involving a 67-yr-old woman who presented with metastatic nodules in the lungs and a vague but recent history of breast cancer.
TextSentencer_T6 854-956 Sentence denotes The case highlights a subtype of MCB with a predominant spindle cell component metastatic to the lung.
TextSentencer_T7 957-1123 Sentence denotes Fine-needle aspiration biopsy (FNAB) smears of the nodules revealed a bland, spindle cell, mesenchymal proliferation with minimal evidence of an epithelial component.
TextSentencer_T8 1124-1389 Sentence denotes A second primary was clinically excluded and a request for review of the original slides identified a metaplastic component to the original tumor with a histologic and immunohistochemical profile identical to the metastatic tumor, confirming origin from the breast.
TextSentencer_T9 1390-1498 Sentence denotes Metaplastic carcinomas of the breast commonly bypass axillary lymph nodes and present as distant metastases.
TextSentencer_T10 1499-1720 Sentence denotes FNAB diagnosis of metaplastic carcinoma of the breast is quite difficult at the primary site and poses a formidable diagnostic challenge at a metastatic site, especially when the dominant pattern is not of the usual type.
TextSentencer_T11 1721-1823 Sentence denotes The literature is reviewed, confirming the rarity of such a presentation and the novelty of this case.
TextSentencer_T12 1824-1969 Sentence denotes Confirmation by FNAB is also quite difficult but may become more commonplace as a trend toward minimal intervention continues to gain popularity.
TextSentencer_T13 1970-2203 Sentence denotes This case emphasizes the importance of recognizing and reporting metaplastic elements in primary breast tumors, as well as the value of direct morphologic comparison of cytologic material from FNABs with archival histologic material.
TextSentencer_T14 2204-2309 Sentence denotes In such situations, the importance of complete and accurate clinicopathologic information is underscored.
T1 0-133 Sentence denotes Metastatic metaplastic carcinoma of the breast (MCB): an uncharacteristic pattern of presentation with clinicopathologic correlation.
T2 134-382 Sentence denotes Metaplastic carcinoma of the breast (MCB) is a well recognized but uncommon aberrant manifestation of poorly differentiated invasive carcinoma containing both epithelial (ductal) and mesenchymal elements as well as a transitional form between them.
T3 383-577 Sentence denotes This heterogeneous tumor characteristically contains ductal carcinoma cells mixed with areas of diverse morphologic phenotype displaying spindle, squamous, chondroid, or osseous differentiation.
T4 578-706 Sentence denotes Some studies have suggested that certain types of metaplastic carcinoma have a more favorable prognosis as compared with others.
T5 707-853 Sentence denotes We describe a case involving a 67-yr-old woman who presented with metastatic nodules in the lungs and a vague but recent history of breast cancer.
T6 854-956 Sentence denotes The case highlights a subtype of MCB with a predominant spindle cell component metastatic to the lung.
T7 957-1123 Sentence denotes Fine-needle aspiration biopsy (FNAB) smears of the nodules revealed a bland, spindle cell, mesenchymal proliferation with minimal evidence of an epithelial component.
T8 1124-1389 Sentence denotes A second primary was clinically excluded and a request for review of the original slides identified a metaplastic component to the original tumor with a histologic and immunohistochemical profile identical to the metastatic tumor, confirming origin from the breast.
T9 1390-1498 Sentence denotes Metaplastic carcinomas of the breast commonly bypass axillary lymph nodes and present as distant metastases.
T10 1499-1720 Sentence denotes FNAB diagnosis of metaplastic carcinoma of the breast is quite difficult at the primary site and poses a formidable diagnostic challenge at a metastatic site, especially when the dominant pattern is not of the usual type.
T11 1721-1823 Sentence denotes The literature is reviewed, confirming the rarity of such a presentation and the novelty of this case.
T12 1824-1969 Sentence denotes Confirmation by FNAB is also quite difficult but may become more commonplace as a trend toward minimal intervention continues to gain popularity.
T13 1970-2203 Sentence denotes This case emphasizes the importance of recognizing and reporting metaplastic elements in primary breast tumors, as well as the value of direct morphologic comparison of cytologic material from FNABs with archival histologic material.
T14 2204-2309 Sentence denotes In such situations, the importance of complete and accurate clinicopathologic information is underscored.

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 1452-1457 http://purl.obolibrary.org/obo/UBERON_0002391 denotes lymph
PD-UBERON-AE-B_T2 1452-1463 http://purl.obolibrary.org/obo/UBERON_0000029 denotes lymph nodes
PD-UBERON-AE-B_T3 40-46 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T4 163-169 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T5 839-845 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T6 1382-1388 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T7 1420-1426 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T8 1546-1552 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T9 2067-2073 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T10 799-804 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lungs
PD-UBERON-AE-B_T11 951-955 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
PD-UBERON-AE-B_T12 317-328 http://purl.obolibrary.org/obo/UBERON_0003104 denotes mesenchymal
PD-UBERON-AE-B_T13 1048-1059 http://purl.obolibrary.org/obo/UBERON_0003104 denotes mesenchymal
PD-UBERON-AE-B_T14 1443-1463 http://purl.obolibrary.org/obo/UBERON_0001097 denotes axillary lymph nodes