PubMed:11588153
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/11588153","sourcedb":"PubMed","sourceid":"11588153","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/11588153","text":"Fucosyltransferases: structure/function studies.\nAlpha3-fucosyltransferases (alpha3-FucTs) catalyze the final step in the synthesis of a range of important glycoconjugates that function in cell adhesion and lymphocyte recirculation. Six members of this family of enzymes have been cloned from the human genome, and their expression pattern has been shown to be highly regulated. Each enzyme has a unique acceptor substrate binding pattern, and each generates a unique range of fucosylated products. Results from a range of studies have provided information on amino acids in the FucT sequence that contribute to the differential acceptor specificity for the FucTs, and to the binding of the nucleotide sugar donor GDP-fucose. These results, in conjunction with results obtained from the analysis of the disulfide bond pattern, have provided useful clues about the spatial distribution of amino acids that influence or directly contribute to substrate binding. This information is reviewed here, and a molecular fold prediction is presented which has been constructed based on the available information and current modeling methodology.","tracks":[{"project":"Glycan-Motif","denotations":[{"id":"T1","span":{"begin":718,"end":724},"obj":"https://glytoucan.org/Structures/Glycans/G82576YO"}],"attributes":[{"subj":"T1","pred":"source","obj":"Glycan-Motif"}]},{"project":"GlyCosmos6-Glycan-Motif-Image","denotations":[{"id":"T1","span":{"begin":718,"end":724},"obj":"Glycan_Motif"}],"attributes":[{"id":"A1","pred":"image","subj":"T1","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82576YO"},{"subj":"T1","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Image"}]},{"project":"GlyCosmos6-Glycan-Motif-Structure","denotations":[{"id":"T1","span":{"begin":718,"end":724},"obj":"https://glytoucan.org/Structures/Glycans/G82576YO"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Structure"}]},{"project":"ICD10","denotations":[{"id":"T1","span":{"begin":744,"end":755},"obj":"http://purl.bioontology.org/ontology/ICD10/H10"},{"id":"T2","span":{"begin":744,"end":755},"obj":"http://purl.bioontology.org/ontology/ICD10/H10.9"}],"attributes":[{"subj":"T1","pred":"source","obj":"ICD10"},{"subj":"T2","pred":"source","obj":"ICD10"}]},{"project":"GlycoBiology-FMA","denotations":[{"id":"_T1","span":{"begin":156,"end":171},"obj":"FMAID:196776"},{"id":"_T2","span":{"begin":156,"end":171},"obj":"FMAID:82782"},{"id":"_T3","span":{"begin":186,"end":193},"obj":"FMAID:199054"},{"id":"_T4","span":{"begin":186,"end":193},"obj":"FMAID:84785"},{"id":"_T5","span":{"begin":207,"end":217},"obj":"FMAID:167171"},{"id":"_T6","span":{"begin":207,"end":217},"obj":"FMAID:62870"},{"id":"_T7","span":{"begin":207,"end":217},"obj":"FMAID:62869"},{"id":"_T8","span":{"begin":207,"end":217},"obj":"FMAID:167163"},{"id":"_T9","span":{"begin":207,"end":217},"obj":"FMAID:167176"},{"id":"_T10","span":{"begin":207,"end":217},"obj":"FMAID:62863"},{"id":"_T11","span":{"begin":207,"end":217},"obj":"FMAID:167174"},{"id":"_T12","span":{"begin":207,"end":217},"obj":"FMAID:167173"},{"id":"_T13","span":{"begin":303,"end":309},"obj":"FMAID:84116"},{"id":"_T14","span":{"begin":303,"end":309},"obj":"FMAID:198062"},{"id":"_T15","span":{"begin":560,"end":571},"obj":"FMAID:196728"},{"id":"_T16","span":{"begin":560,"end":571},"obj":"FMAID:82739"},{"id":"_T17","span":{"begin":691,"end":701},"obj":"FMAID:196729"},{"id":"_T18","span":{"begin":691,"end":701},"obj":"FMAID:82740"},{"id":"_T19","span":{"begin":702,"end":707},"obj":"FMAID:196724"},{"id":"_T20","span":{"begin":718,"end":724},"obj":"FMAID:196784"},{"id":"_T21","span":{"begin":718,"end":724},"obj":"FMAID:82790"},{"id":"_T22","span":{"begin":888,"end":899},"obj":"FMAID:82739"},{"id":"_T23","span":{"begin":888,"end":899},"obj":"FMAID:196728"}],"namespaces":[{"prefix":"FMAID","uri":"http://purl.org/sig/ont/fma/fma"}],"attributes":[{"subj":"_T1","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T2","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T3","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T4","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T5","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T6","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T7","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T8","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T9","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T10","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T11","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T12","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T13","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T14","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T15","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T16","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T17","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T18","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T19","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T20","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T21","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T22","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T23","pred":"source","obj":"GlycoBiology-FMA"}]},{"project":"uniprot-mouse","denotations":[{"id":"T1","span":{"begin":864,"end":871},"obj":"http://www.uniprot.org/uniprot/Q9EQE5"}],"attributes":[{"subj":"T1","pred":"source","obj":"uniprot-mouse"}]},{"project":"sentences","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":48},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":49,"end":232},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":233,"end":378},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":379,"end":498},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":499,"end":725},"obj":"Sentence"},{"id":"TextSentencer_T6","span":{"begin":726,"end":959},"obj":"Sentence"},{"id":"TextSentencer_T7","span":{"begin":960,"end":1135},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":48},"obj":"Sentence"},{"id":"T2","span":{"begin":49,"end":232},"obj":"Sentence"},{"id":"T3","span":{"begin":233,"end":378},"obj":"Sentence"},{"id":"T4","span":{"begin":379,"end":498},"obj":"Sentence"},{"id":"T5","span":{"begin":499,"end":725},"obj":"Sentence"},{"id":"T6","span":{"begin":726,"end":959},"obj":"Sentence"},{"id":"T7","span":{"begin":960,"end":1135},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":48},"obj":"Sentence"},{"id":"T2","span":{"begin":49,"end":232},"obj":"Sentence"},{"id":"T3","span":{"begin":233,"end":378},"obj":"Sentence"},{"id":"T4","span":{"begin":379,"end":498},"obj":"Sentence"},{"id":"T5","span":{"begin":499,"end":725},"obj":"Sentence"},{"id":"T6","span":{"begin":726,"end":959},"obj":"Sentence"},{"id":"T7","span":{"begin":960,"end":1135},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"TextSentencer_T1","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T2","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T3","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T4","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T5","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T6","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T7","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"}]},{"project":"GO-BP","denotations":[{"id":"T1","span":{"begin":84,"end":89},"obj":"http://purl.obolibrary.org/obo/GO_0008424"},{"id":"T2","span":{"begin":579,"end":583},"obj":"http://purl.obolibrary.org/obo/GO_0008424"},{"id":"T3","span":{"begin":122,"end":131},"obj":"http://purl.obolibrary.org/obo/GO_0009058"},{"id":"T4","span":{"begin":189,"end":202},"obj":"http://purl.obolibrary.org/obo/GO_0007155"},{"id":"T5","span":{"begin":189,"end":217},"obj":"http://purl.obolibrary.org/obo/GO_0036339"},{"id":"T6","span":{"begin":368,"end":377},"obj":"http://purl.obolibrary.org/obo/GO_0065007"},{"id":"T7","span":{"begin":477,"end":488},"obj":"http://purl.obolibrary.org/obo/GO_0036065"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-BP"},{"subj":"T2","pred":"source","obj":"GO-BP"},{"subj":"T3","pred":"source","obj":"GO-BP"},{"subj":"T4","pred":"source","obj":"GO-BP"},{"subj":"T5","pred":"source","obj":"GO-BP"},{"subj":"T6","pred":"source","obj":"GO-BP"},{"subj":"T7","pred":"source","obj":"GO-BP"}]},{"project":"GO-MF","denotations":[{"id":"T1","span":{"begin":423,"end":430},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T2","span":{"begin":676,"end":683},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T3","span":{"begin":951,"end":958},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T4","span":{"begin":423,"end":430},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T5","span":{"begin":676,"end":683},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T6","span":{"begin":951,"end":958},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T7","span":{"begin":423,"end":430},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T8","span":{"begin":676,"end":683},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T9","span":{"begin":951,"end":958},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T10","span":{"begin":423,"end":430},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T11","span":{"begin":676,"end":683},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T12","span":{"begin":951,"end":958},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T13","span":{"begin":423,"end":438},"obj":"http://purl.obolibrary.org/obo/GO_0001871"},{"id":"T14","span":{"begin":676,"end":701},"obj":"http://purl.obolibrary.org/obo/GO_0000166"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-MF"},{"subj":"T2","pred":"source","obj":"GO-MF"},{"subj":"T3","pred":"source","obj":"GO-MF"},{"subj":"T4","pred":"source","obj":"GO-MF"},{"subj":"T5","pred":"source","obj":"GO-MF"},{"subj":"T6","pred":"source","obj":"GO-MF"},{"subj":"T7","pred":"source","obj":"GO-MF"},{"subj":"T8","pred":"source","obj":"GO-MF"},{"subj":"T9","pred":"source","obj":"GO-MF"},{"subj":"T10","pred":"source","obj":"GO-MF"},{"subj":"T11","pred":"source","obj":"GO-MF"},{"subj":"T12","pred":"source","obj":"GO-MF"},{"subj":"T13","pred":"source","obj":"GO-MF"},{"subj":"T14","pred":"source","obj":"GO-MF"}]},{"project":"GO-CC","denotations":[{"id":"T1","span":{"begin":189,"end":193},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-CC"}]},{"project":"EDAM-topics","denotations":[{"id":"T1","span":{"begin":40,"end":47},"obj":"http://edamontology.org/topic_3678"},{"id":"T2","span":{"begin":297,"end":302},"obj":"http://edamontology.org/topic_2815"},{"id":"T3","span":{"begin":303,"end":309},"obj":"http://edamontology.org/topic_0622"},{"id":"T4","span":{"begin":523,"end":530},"obj":"http://edamontology.org/topic_3678"},{"id":"T5","span":{"begin":560,"end":571},"obj":"http://edamontology.org/topic_0154"},{"id":"T6","span":{"begin":584,"end":592},"obj":"http://edamontology.org/topic_0080"},{"id":"T7","span":{"begin":584,"end":592},"obj":"http://edamontology.org/topic_3168"},{"id":"T8","span":{"begin":888,"end":899},"obj":"http://edamontology.org/topic_0154"}],"attributes":[{"subj":"T1","pred":"source","obj":"EDAM-topics"},{"subj":"T2","pred":"source","obj":"EDAM-topics"},{"subj":"T3","pred":"source","obj":"EDAM-topics"},{"subj":"T4","pred":"source","obj":"EDAM-topics"},{"subj":"T5","pred":"source","obj":"EDAM-topics"},{"subj":"T6","pred":"source","obj":"EDAM-topics"},{"subj":"T7","pred":"source","obj":"EDAM-topics"},{"subj":"T8","pred":"source","obj":"EDAM-topics"}]},{"project":"EDAM-DFO","denotations":[{"id":"T1","span":{"begin":21,"end":30},"obj":"http://edamontology.org/data_0883"},{"id":"T2","span":{"begin":30,"end":39},"obj":"http://edamontology.org/operation_0004"},{"id":"T3","span":{"begin":177,"end":188},"obj":"http://edamontology.org/operation_0004"},{"id":"T4","span":{"begin":321,"end":339},"obj":"http://edamontology.org/data_0928"},{"id":"T5","span":{"begin":449,"end":458},"obj":"http://edamontology.org/operation_3429"},{"id":"T6","span":{"begin":560,"end":574},"obj":"http://edamontology.org/data_1501"},{"id":"T7","span":{"begin":584,"end":592},"obj":"http://edamontology.org/operation_3218"},{"id":"T8","span":{"begin":584,"end":592},"obj":"http://edamontology.org/data_2044"},{"id":"T9","span":{"begin":691,"end":701},"obj":"http://edamontology.org/format_1207"},{"id":"T10","span":{"begin":787,"end":795},"obj":"http://edamontology.org/operation_2945"},{"id":"T11","span":{"begin":1016,"end":1026},"obj":"http://edamontology.org/operation_2423"},{"id":"T12","span":{"begin":1055,"end":1066},"obj":"http://edamontology.org/operation_3429"}],"attributes":[{"subj":"T1","pred":"source","obj":"EDAM-DFO"},{"subj":"T2","pred":"source","obj":"EDAM-DFO"},{"subj":"T3","pred":"source","obj":"EDAM-DFO"},{"subj":"T4","pred":"source","obj":"EDAM-DFO"},{"subj":"T5","pred":"source","obj":"EDAM-DFO"},{"subj":"T6","pred":"source","obj":"EDAM-DFO"},{"subj":"T7","pred":"source","obj":"EDAM-DFO"},{"subj":"T8","pred":"source","obj":"EDAM-DFO"},{"subj":"T9","pred":"source","obj":"EDAM-DFO"},{"subj":"T10","pred":"source","obj":"EDAM-DFO"},{"subj":"T11","pred":"source","obj":"EDAM-DFO"},{"subj":"T12","pred":"source","obj":"EDAM-DFO"}]},{"project":"glycogenes","denotations":[{"id":"PD-GlycoGenes20190927-B_T1","span":{"begin":340,"end":343},"obj":"https://acgg.asia/db/ggdb/info/gg135"},{"id":"PD-GlycoGenes20190927-B_T2","span":{"begin":391,"end":394},"obj":"https://acgg.asia/db/ggdb/info/gg135"},{"id":"PD-GlycoGenes20190927-B_T3","span":{"begin":1046,"end":1049},"obj":"https://acgg.asia/db/ggdb/info/gg135"}],"attributes":[{"subj":"PD-GlycoGenes20190927-B_T1","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T2","pred":"source","obj":"glycogenes"},{"subj":"PD-GlycoGenes20190927-B_T3","pred":"source","obj":"glycogenes"}]},{"project":"GlyTouCan-IUPAC","denotations":[{"id":"GlycanIUPAC_T1","span":{"begin":702,"end":707},"obj":"\"http://rdf.glycoinfo.org/glycan/G59665TO\""},{"id":"GlycanIUPAC_T2","span":{"begin":702,"end":707},"obj":"\"http://rdf.glycoinfo.org/glycan/G32915EI\""},{"id":"GlycanIUPAC_T3","span":{"begin":702,"end":707},"obj":"\"http://rdf.glycoinfo.org/glycan/G60625TS\""}],"attributes":[{"subj":"GlycanIUPAC_T1","pred":"source","obj":"GlyTouCan-IUPAC"},{"subj":"GlycanIUPAC_T2","pred":"source","obj":"GlyTouCan-IUPAC"},{"subj":"GlycanIUPAC_T3","pred":"source","obj":"GlyTouCan-IUPAC"}]},{"project":"NCBITAXON","denotations":[{"id":"T1","span":{"begin":297,"end":302},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"9606"},{"subj":"T1","pred":"source","obj":"NCBITAXON"}]},{"project":"Anatomy-UBERON","denotations":[{"id":"T1","span":{"begin":207,"end":217},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CL_0000542"},{"subj":"T1","pred":"source","obj":"Anatomy-UBERON"}]},{"project":"CL-cell","denotations":[{"id":"T1","span":{"begin":207,"end":217},"obj":"Cell"}],"attributes":[{"id":"A1","pred":"cl_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CL:0000542"},{"subj":"T1","pred":"source","obj":"CL-cell"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"Glycan-Motif","color":"#ebec93","default":true},{"id":"GlyCosmos6-Glycan-Motif-Image","color":"#d393ec"},{"id":"GlyCosmos6-Glycan-Motif-Structure","color":"#93ecb9"},{"id":"ICD10","color":"#ec9f93"},{"id":"GlycoBiology-FMA","color":"#93a1ec"},{"id":"uniprot-mouse","color":"#bbec93"},{"id":"sentences","color":"#ec93d5"},{"id":"GO-BP","color":"#93ece9"},{"id":"GO-MF","color":"#eccf93"},{"id":"GO-CC","color":"#b593ec"},{"id":"EDAM-topics","color":"#93ec9b"},{"id":"EDAM-DFO","color":"#ec93a4"},{"id":"glycogenes","color":"#93bfec"},{"id":"GlyTouCan-IUPAC","color":"#d9ec93"},{"id":"NCBITAXON","color":"#e593ec"},{"id":"Anatomy-UBERON","color":"#93eccb"},{"id":"CL-cell","color":"#ecb193"}]}]}}