PubMed:11572857
Annnotations
ggdb-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 192-204 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| T2 | 520-532 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| T3 | 575-587 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| T4 | 691-703 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| T5 | 856-868 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| T6 | 1043-1055 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| T7 | 1499-1511 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 6-27 | Glycan_Motif | denotes | N-acetylgalactosamine | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB |
| T2 | 138-159 | Glycan_Motif | denotes | N-Acetylgalactosamine | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB |
| T3 | 284-305 | Glycan_Motif | denotes | N-acetylgalactosamine | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB |
| T4 | 336-347 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T5 | 1216-1227 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T6 | 1342-1363 | Glycan_Motif | denotes | N-acetylgalactosamine | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB |
GGDB-2020
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 192-204 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| T2 | 520-532 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| T3 | 575-587 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| T4 | 691-703 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| T5 | 856-868 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| T6 | 1043-1055 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| T7 | 1499-1511 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 336-347 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T2 | 1216-1227 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-137 | Sentence | denotes | Human N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase cDNA is related to human B cell recombination activating gene-associated gene. |
| T2 | 138-377 | Sentence | denotes | N-Acetylgalactosamine 4-sulfate 6-O-sulfotransferase (GalNAc4S-6ST) transfers sulfate from 3'-phosphoadenosine 5'-phosphosulfate to position 6 of N-acetylgalactosamine 4-sulfate (GalNAc(4SO(4))) in chondroitin sulfate and dermatan sulfate. |
| T3 | 378-466 | Sentence | denotes | We have previously purified the enzyme to apparent homogeneity from the squid cartilage. |
| T4 | 467-533 | Sentence | denotes | We report here cloning and characterization of human GalNAc4S-6ST. |
| T5 | 534-601 | Sentence | denotes | The strategy for identification of human GalNAc4S-6ST consisted of: |
| T6 | 602-845 | Sentence | denotes | 1) determination of the amino acid sequences of peptides derived from the purified squid GalNAc4S-6ST, 2) amplification of squid DNA by polymerase chain reaction, and 3) homology search using the amino acid sequence deduced from the squid DNA. |
| T7 | 846-993 | Sentence | denotes | The human GalNAc4S-6ST cDNA contains a single open reading frame that predicts a type II transmembrane protein composed of 561 amino acid residues. |
| T8 | 994-1259 | Sentence | denotes | The recombinant protein expressed from the human GalNAc4S-6ST cDNA transferred sulfate from 3'-phosphoadenosine 5'-phosphosulfate to position 6 of the nonreducing terminal and internal GalNAc(4SO(4)) residues contained in chondroitin sulfate A and dermatan sulfate. |
| T9 | 1260-1461 | Sentence | denotes | When a trisaccharide and a pentasaccharide having sulfate groups at position 4 of N-acetylgalactosamine residues were used as acceptors, only nonreducing terminal GalNAc(4SO(4)) residues were sulfated. |
| T10 | 1462-1616 | Sentence | denotes | The nucleotide sequence of the human GalNAc4S-6ST cDNA was nearly identical to the sequence of human B cell recombination activating gene-associated gene. |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 6-27 | https://glytoucan.org/Structures/Glycans/G27025MB | denotes | N-acetylgalactosamine |
| T2 | 138-159 | https://glytoucan.org/Structures/Glycans/G27025MB | denotes | N-Acetylgalactosamine |
| T3 | 284-305 | https://glytoucan.org/Structures/Glycans/G27025MB | denotes | N-acetylgalactosamine |
| T4 | 336-347 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T5 | 1216-1227 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T6 | 1342-1363 | https://glytoucan.org/Structures/Glycans/G27025MB | denotes | N-acetylgalactosamine |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 456-465 | http://purl.obolibrary.org/obo/MAT_0000189 | denotes | cartilage |
FSU-PRGE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 6-58 | protein | denotes | N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase |
| T2 | 84-136 | protein | denotes | B cell recombination activating gene-associated gene |
| T3 | 138-190 | protein | denotes | N-Acetylgalactosamine 4-sulfate 6-O-sulfotransferase |
| T4 | 192-204 | protein | denotes | GalNAc4S-6ST |
| T5 | 520-532 | protein | denotes | GalNAc4S-6ST |
| T6 | 575-587 | protein | denotes | GalNAc4S-6ST |
| T7 | 691-703 | protein | denotes | GalNAc4S-6ST |
| T8 | 856-868 | protein | denotes | GalNAc4S-6ST |
| T9 | 1043-1055 | protein | denotes | GalNAc4S-6ST |
| T10 | 1499-1511 | protein | denotes | GalNAc4S-6ST |
| T11 | 1563-1615 | protein | denotes | B cell recombination activating gene-associated gene |
glycogenes
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoGenes20190927-B_T1 | 8-58 | https://acgg.asia/db/ggdb/info/gg047 | denotes | acetylgalactosamine 4-sulfate 6-O-sulfotransferase |
| PD-GlycoGenes20190927-B_T2 | 140-190 | https://acgg.asia/db/ggdb/info/gg047 | denotes | Acetylgalactosamine 4-sulfate 6-O-sulfotransferase |
| PD-GlycoGenes20190927-B_T3 | 192-204 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| PD-GlycoGenes20190927-B_T4 | 520-532 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| PD-GlycoGenes20190927-B_T5 | 575-587 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| PD-GlycoGenes20190927-B_T6 | 691-703 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| PD-GlycoGenes20190927-B_T7 | 856-868 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| PD-GlycoGenes20190927-B_T8 | 932-934 | https://acgg.asia/db/ggdb/info/gg111 | denotes | II |
| PD-GlycoGenes20190927-B_T9 | 1043-1055 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
| PD-GlycoGenes20190927-B_T10 | 1499-1511 | https://acgg.asia/db/ggdb/info/gg047 | denotes | GalNAc4S-6ST |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 456-465 | Body_part | denotes | cartilage | http://purl.obolibrary.org/obo/MAT_0000189 |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 317-323 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T2 | 336-347 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T3 | 1179-1185 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T4 | 1216-1227 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T5 | 1423-1429 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
GlyCosmos15-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 0-5 | OrganismTaxon | denotes | Human | 9606 |
| T2 | 78-83 | OrganismTaxon | denotes | human | 9606 |
| T3 | 514-519 | OrganismTaxon | denotes | human | 9606 |
| T4 | 569-574 | OrganismTaxon | denotes | human | 9606 |
| T5 | 850-855 | OrganismTaxon | denotes | human | 9606 |
| T6 | 1037-1042 | OrganismTaxon | denotes | human | 9606 |
| T7 | 1493-1498 | OrganismTaxon | denotes | human | 9606 |
| T8 | 1557-1562 | OrganismTaxon | denotes | human | 9606 |
GlyCosmos15-CL
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 84-90 | Cell | denotes | B cell | http://purl.obolibrary.org/obo/CL:0000236 |
| T2 | 1563-1569 | Cell | denotes | B cell | http://purl.obolibrary.org/obo/CL:0000236 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 84-90 | Body_part | denotes | B cell | http://purl.obolibrary.org/obo/CL_0000236 |
| T2 | 456-465 | Body_part | denotes | cartilage | http://purl.obolibrary.org/obo/UBERON_0002418|http://purl.obolibrary.org/obo/UBERON_0007844 |
| T4 | 935-948 | Body_part | denotes | transmembrane | http://purl.obolibrary.org/obo/GO_0016020 |
| T5 | 1563-1569 | Body_part | denotes | B cell | http://purl.obolibrary.org/obo/CL_0000236 |
GlyCosmos15-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 456-465 | Body_part | denotes | cartilage | http://purl.obolibrary.org/obo/MAT_0000189 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-137 | Sentence | denotes | Human N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase cDNA is related to human B cell recombination activating gene-associated gene. |
| T2 | 138-377 | Sentence | denotes | N-Acetylgalactosamine 4-sulfate 6-O-sulfotransferase (GalNAc4S-6ST) transfers sulfate from 3'-phosphoadenosine 5'-phosphosulfate to position 6 of N-acetylgalactosamine 4-sulfate (GalNAc(4SO(4))) in chondroitin sulfate and dermatan sulfate. |
| T3 | 378-466 | Sentence | denotes | We have previously purified the enzyme to apparent homogeneity from the squid cartilage. |
| T4 | 467-533 | Sentence | denotes | We report here cloning and characterization of human GalNAc4S-6ST. |
| T5 | 534-601 | Sentence | denotes | The strategy for identification of human GalNAc4S-6ST consisted of: |
| T6 | 602-845 | Sentence | denotes | 1) determination of the amino acid sequences of peptides derived from the purified squid GalNAc4S-6ST, 2) amplification of squid DNA by polymerase chain reaction, and 3) homology search using the amino acid sequence deduced from the squid DNA. |
| T7 | 846-993 | Sentence | denotes | The human GalNAc4S-6ST cDNA contains a single open reading frame that predicts a type II transmembrane protein composed of 561 amino acid residues. |
| T8 | 994-1259 | Sentence | denotes | The recombinant protein expressed from the human GalNAc4S-6ST cDNA transferred sulfate from 3'-phosphoadenosine 5'-phosphosulfate to position 6 of the nonreducing terminal and internal GalNAc(4SO(4)) residues contained in chondroitin sulfate A and dermatan sulfate. |
| T9 | 1260-1461 | Sentence | denotes | When a trisaccharide and a pentasaccharide having sulfate groups at position 4 of N-acetylgalactosamine residues were used as acceptors, only nonreducing terminal GalNAc(4SO(4)) residues were sulfated. |
| T10 | 1462-1616 | Sentence | denotes | The nucleotide sequence of the human GalNAc4S-6ST cDNA was nearly identical to the sequence of human B cell recombination activating gene-associated gene. |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-137 | Sentence | denotes | Human N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase cDNA is related to human B cell recombination activating gene-associated gene. |
| T2 | 138-377 | Sentence | denotes | N-Acetylgalactosamine 4-sulfate 6-O-sulfotransferase (GalNAc4S-6ST) transfers sulfate from 3'-phosphoadenosine 5'-phosphosulfate to position 6 of N-acetylgalactosamine 4-sulfate (GalNAc(4SO(4))) in chondroitin sulfate and dermatan sulfate. |
| T3 | 378-466 | Sentence | denotes | We have previously purified the enzyme to apparent homogeneity from the squid cartilage. |
| T4 | 467-533 | Sentence | denotes | We report here cloning and characterization of human GalNAc4S-6ST. |
| T5 | 534-601 | Sentence | denotes | The strategy for identification of human GalNAc4S-6ST consisted of: |
| T6 | 602-845 | Sentence | denotes | 1) determination of the amino acid sequences of peptides derived from the purified squid GalNAc4S-6ST, 2) amplification of squid DNA by polymerase chain reaction, and 3) homology search using the amino acid sequence deduced from the squid DNA. |
| T7 | 846-993 | Sentence | denotes | The human GalNAc4S-6ST cDNA contains a single open reading frame that predicts a type II transmembrane protein composed of 561 amino acid residues. |
| T8 | 994-1259 | Sentence | denotes | The recombinant protein expressed from the human GalNAc4S-6ST cDNA transferred sulfate from 3'-phosphoadenosine 5'-phosphosulfate to position 6 of the nonreducing terminal and internal GalNAc(4SO(4)) residues contained in chondroitin sulfate A and dermatan sulfate. |
| T9 | 1260-1461 | Sentence | denotes | When a trisaccharide and a pentasaccharide having sulfate groups at position 4 of N-acetylgalactosamine residues were used as acceptors, only nonreducing terminal GalNAc(4SO(4)) residues were sulfated. |
| T10 | 1462-1616 | Sentence | denotes | The nucleotide sequence of the human GalNAc4S-6ST cDNA was nearly identical to the sequence of human B cell recombination activating gene-associated gene. |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 317-323 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T2 | 336-347 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T3 | 1179-1185 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T4 | 1216-1227 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T5 | 1423-1429 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 336-347 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T2 | 1216-1227 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 0-5 | OrganismTaxon | denotes | Human | 9606 |
| T2 | 78-83 | OrganismTaxon | denotes | human | 9606 |
| T3 | 514-519 | OrganismTaxon | denotes | human | 9606 |
| T4 | 569-574 | OrganismTaxon | denotes | human | 9606 |
| T5 | 850-855 | OrganismTaxon | denotes | human | 9606 |
| T6 | 1037-1042 | OrganismTaxon | denotes | human | 9606 |
| T7 | 1493-1498 | OrganismTaxon | denotes | human | 9606 |
| T8 | 1557-1562 | OrganismTaxon | denotes | human | 9606 |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 336-347 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T2 | 1216-1227 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 84-90 | Body_part | denotes | B cell | http://purl.obolibrary.org/obo/CL_0000236 |
| T2 | 456-465 | Body_part | denotes | cartilage | http://purl.obolibrary.org/obo/UBERON_0002418|http://purl.obolibrary.org/obo/UBERON_0007844 |
| T4 | 935-948 | Body_part | denotes | transmembrane | http://purl.obolibrary.org/obo/GO_0016020 |
| T5 | 1563-1569 | Body_part | denotes | B cell | http://purl.obolibrary.org/obo/CL_0000236 |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 84-90 | Cell | denotes | B cell | http://purl.obolibrary.org/obo/CL:0000236 |
| T2 | 1563-1569 | Cell | denotes | B cell | http://purl.obolibrary.org/obo/CL:0000236 |