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PubMed:11500512 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
T1 0-167 Sentence denotes Characterization of the human ABCG1 gene: liver X receptor activates an internal promoter that produces a novel transcript encoding an alternative form of the protein.
T2 168-345 Sentence denotes The human ABCG1 gene encodes a member of the ATP-binding cassette (ABC) superfamily of transporter proteins and is highly induced when macrophages are incubated with oxysterols.
T3 346-617 Sentence denotes Using mRNA from oxysterol-treated human THP-1 cells together with 5'-rapid amplification of cDNA ends and polymerase chain reaction, we identified a novel ABCG1 transcript that encodes a putative protein of 786 residues containing a new amino terminus of 203 amino acids.
T4 618-1030 Sentence denotes Characterization of the genomic organization and structure of the human ABCG1 gene demonstrates that: (i) the gene consists of 23 exons spanning 98 kilobase pairs (kb) on chromosome 21q22.3, (ii) the 203 amino acids are encoded on three previously unidentified exons, 8-10, and (iii) a promoter, containing a TATA box and two liver X receptor (LXR) alpha response elements (LXREs), is located upstream of exon 8.
T5 1031-1226 Sentence denotes Northern analysis using exon-specific probes confirms that oxysterol treatment results in >10-fold induction of ABCG1 transcripts that are derived from either exons 8-23 or exons 5, 7, and 11-23.
T6 1227-1346 Sentence denotes Electromobility shift assays demonstrate that LXRalpha and retinoid X receptor alpha bind to the two LXREs in intron 7.
T7 1347-1614 Sentence denotes Cells were transiently transfected with reporter luciferase constructs under the control of either (i) 9 kb of genomic DNA corresponding to intron 7 and part of exon 8 and containing either wild-type or mutant LXREs or (ii) two copies of the wild-type or mutant LXRE.
T8 1615-1773 Sentence denotes In all cases, the wild-type construct was regulated in an LXR- and oxysterol-dependent manner, and this regulation was attenuated when the LXREs were mutated.
T9 1774-1984 Sentence denotes In conclusion, the human ABCG1 gene contains multiple promoters, spans more than 98 kb and comprises 23 exons that give rise to alternative transcripts encoding proteins with different amino-terminal sequences.
T10 1985-2123 Sentence denotes Elucidation of the various roles of different ABCG1 isoforms will be important for our understanding of mammalian cholesterol homeostasis.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 42-47 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver
T2 944-949 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver

FSU-PRGE

Id Subject Object Predicate Lexical cue
T1 30-35 protein denotes ABCG1
T2 42-58 protein denotes liver X receptor
T3 178-183 protein denotes ABCG1
T4 213-275 protein denotes ATP-binding cassette (ABC) superfamily of transporter proteins
T5 501-506 protein denotes ABCG1
T6 690-695 protein denotes ABCG1
T7 944-972 protein denotes liver X receptor (LXR) alpha
T8 1143-1148 protein denotes ABCG1
T9 1273-1281 protein denotes LXRalpha
T10 1286-1311 protein denotes retinoid X receptor alpha
T11 1396-1406 protein denotes luciferase
T12 1673-1676 protein denotes LXR
T13 1799-1804 protein denotes ABCG1
T14 2031-2036 protein denotes ABCG1

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 24-29 OrganismTaxon denotes human 9606
T2 172-177 OrganismTaxon denotes human 9606
T3 380-385 OrganismTaxon denotes human 9606
T4 684-689 OrganismTaxon denotes human 9606
T5 1793-1798 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 42-47 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T2 303-314 Body_part denotes macrophages http://purl.obolibrary.org/obo/CL_0000235
T3 789-799 Body_part denotes chromosome http://purl.obolibrary.org/obo/GO_0005694
T4 944-949 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 42-47 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097
T2 944-949 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 303-314 Cell denotes macrophages http://purl.obolibrary.org/obo/CL:0000235|http://purl.obolibrary.org/obo/CL:0000394