PubMed:11487698 JSONTXT

Annnotations TAB JSON ListView MergeView

    Oryza-OGER

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a novel protein involved in the control of shoot architecture and flowering in Arabidopsis.\nShoot architecture and flowering time in angiosperms depend on the balanced expression of a large number of flowering time and flower meristem identity genes. Loss-of-function mutations in the Arabidopsis EMBRYONIC FLOWER (EMF) genes cause Arabidopsis to eliminate rosette shoot growth and transform the apical meristem from indeterminate to determinate growth by producing a single terminal flower on all nodes. We have identified the EMF1 gene by positional cloning. The deduced polypeptide has no homology with any protein of known function except a putative protein in the rice genome with which EMF1 shares common motifs that include nuclear localization signals, P-loop, and LXXLL elements. Alteration of EMF1 expression in transgenic plants caused progressive changes in flowering time, shoot determinacy, and inflorescence architecture. EMF1 and its related sequence may belong to a new class of proteins that function as transcriptional regulators of phase transition during shoot development."}

    OryzaGP_2021

    {"project":"OryzaGP_2021","denotations":[{"id":"T1","span":{"begin":0,"end":4},"obj":"http://identifiers.org/oryzabase.gene/8773"},{"id":"T2","span":{"begin":0,"end":4},"obj":"http://identifiers.org/oryzabase.gene/19256"},{"id":"T3","span":{"begin":423,"end":436},"obj":"http://identifiers.org/oryzabase.gene/8085"},{"id":"T4","span":{"begin":534,"end":538},"obj":"http://identifiers.org/oryzabase.gene/8773"},{"id":"T5","span":{"begin":534,"end":538},"obj":"http://identifiers.org/oryzabase.gene/19256"},{"id":"T6","span":{"begin":698,"end":702},"obj":"http://identifiers.org/oryzabase.gene/8773"},{"id":"T7","span":{"begin":698,"end":702},"obj":"http://identifiers.org/oryzabase.gene/19256"},{"id":"T8","span":{"begin":809,"end":813},"obj":"http://identifiers.org/oryzabase.gene/8773"},{"id":"T9","span":{"begin":809,"end":813},"obj":"http://identifiers.org/oryzabase.gene/19256"},{"id":"T10","span":{"begin":943,"end":947},"obj":"http://identifiers.org/oryzabase.gene/8773"},{"id":"T11","span":{"begin":943,"end":947},"obj":"http://identifiers.org/oryzabase.gene/19256"},{"id":"T63915","span":{"begin":0,"end":4},"obj":"http://identifiers.org/ricegap/LOC_Os01g12890"},{"id":"T5577","span":{"begin":402,"end":417},"obj":"http://identifiers.org/ricegap/LOC_Os12g29330"},{"id":"T24081","span":{"begin":402,"end":417},"obj":"http://identifiers.org/ricegap/LOC_Os11g03370"},{"id":"T11270","span":{"begin":402,"end":417},"obj":"http://identifiers.org/ricegap/LOC_Os06g23650"},{"id":"T80908","span":{"begin":402,"end":417},"obj":"http://identifiers.org/ricegap/LOC_Os06g04090"},{"id":"T48155","span":{"begin":423,"end":436},"obj":"http://identifiers.org/ricegap/LOC_Os10g28330"},{"id":"T82410","span":{"begin":534,"end":538},"obj":"http://identifiers.org/ricegap/LOC_Os01g12890"},{"id":"T38869","span":{"begin":698,"end":702},"obj":"http://identifiers.org/ricegap/LOC_Os01g12890"},{"id":"T55811","span":{"begin":809,"end":813},"obj":"http://identifiers.org/ricegap/LOC_Os01g12890"},{"id":"T59508","span":{"begin":943,"end":947},"obj":"http://identifiers.org/ricegap/LOC_Os01g12890"},{"id":"T65725","span":{"begin":0,"end":4},"obj":"http://identifiers.org/rapdb.locus/Os01g0229300"},{"id":"T4832","span":{"begin":402,"end":417},"obj":"http://identifiers.org/rapdb.locus/Os12g0477400"},{"id":"T88970","span":{"begin":402,"end":417},"obj":"http://identifiers.org/rapdb.locus/Os11g0127600"},{"id":"T611","span":{"begin":402,"end":417},"obj":"http://identifiers.org/rapdb.locus/Os06g0344900"},{"id":"T92625","span":{"begin":402,"end":417},"obj":"http://identifiers.org/rapdb.locus/Os06g0131700"},{"id":"T66841","span":{"begin":423,"end":436},"obj":"http://identifiers.org/rapdb.locus/Os10g0419200"},{"id":"T24901","span":{"begin":534,"end":538},"obj":"http://identifiers.org/rapdb.locus/Os01g0229300"},{"id":"T81589","span":{"begin":698,"end":702},"obj":"http://identifiers.org/rapdb.locus/Os01g0229300"},{"id":"T27726","span":{"begin":809,"end":813},"obj":"http://identifiers.org/rapdb.locus/Os01g0229300"},{"id":"T21595","span":{"begin":943,"end":947},"obj":"http://identifiers.org/rapdb.locus/Os01g0229300"},{"id":"T18000","span":{"begin":0,"end":4},"obj":"http://identifiers.org/uniprot/Q5NB33"},{"id":"T70812","span":{"begin":534,"end":538},"obj":"http://identifiers.org/uniprot/Q5NB33"},{"id":"T96733","span":{"begin":698,"end":702},"obj":"http://identifiers.org/uniprot/Q5NB33"},{"id":"T64321","span":{"begin":809,"end":813},"obj":"http://identifiers.org/uniprot/Q5NB33"},{"id":"T5124","span":{"begin":943,"end":947},"obj":"http://identifiers.org/uniprot/Q5NB33"},{"id":"M_0","span":{"begin":303,"end":319},"obj":"hunflair:NA:Gene"},{"id":"M_1","span":{"begin":675,"end":679},"obj":"hunflair:NA:Species"},{"id":"M_2","span":{"begin":0,"end":4},"obj":"hunflair:NA:Gene"},{"id":"M_3","span":{"begin":534,"end":538},"obj":"hunflair:NA:Gene"},{"id":"M_4","span":{"begin":698,"end":702},"obj":"hunflair:NA:Gene"},{"id":"M_5","span":{"begin":809,"end":813},"obj":"hunflair:NA:Gene"},{"id":"M_6","span":{"begin":943,"end":947},"obj":"hunflair:NA:Gene"},{"id":"M_7","span":{"begin":321,"end":324},"obj":"hunflair:NA:Gene"},{"id":"M_8","span":{"begin":85,"end":96},"obj":"hunflair:NA:Species"},{"id":"M_9","span":{"begin":291,"end":302},"obj":"hunflair:NA:Species"},{"id":"M_10","span":{"begin":338,"end":349},"obj":"hunflair:NA:Species"}],"text":"EMF1, a novel protein involved in the control of shoot architecture and flowering in Arabidopsis.\nShoot architecture and flowering time in angiosperms depend on the balanced expression of a large number of flowering time and flower meristem identity genes. Loss-of-function mutations in the Arabidopsis EMBRYONIC FLOWER (EMF) genes cause Arabidopsis to eliminate rosette shoot growth and transform the apical meristem from indeterminate to determinate growth by producing a single terminal flower on all nodes. We have identified the EMF1 gene by positional cloning. The deduced polypeptide has no homology with any protein of known function except a putative protein in the rice genome with which EMF1 shares common motifs that include nuclear localization signals, P-loop, and LXXLL elements. Alteration of EMF1 expression in transgenic plants caused progressive changes in flowering time, shoot determinacy, and inflorescence architecture. EMF1 and its related sequence may belong to a new class of proteins that function as transcriptional regulators of phase transition during shoot development."}

    PMID_GLOBAL

    {"project":"PMID_GLOBAL","denotations":[{"id":"T1","span":{"begin":737,"end":765},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"0000179"}],"text":"EMF1, a novel protein involved in the control of shoot architecture and flowering in Arabidopsis.\nShoot architecture and flowering time in angiosperms depend on the balanced expression of a large number of flowering time and flower meristem identity genes. Loss-of-function mutations in the Arabidopsis EMBRYONIC FLOWER (EMF) genes cause Arabidopsis to eliminate rosette shoot growth and transform the apical meristem from indeterminate to determinate growth by producing a single terminal flower on all nodes. We have identified the EMF1 gene by positional cloning. The deduced polypeptide has no homology with any protein of known function except a putative protein in the rice genome with which EMF1 shares common motifs that include nuclear localization signals, P-loop, and LXXLL elements. Alteration of EMF1 expression in transgenic plants caused progressive changes in flowering time, shoot determinacy, and inflorescence architecture. EMF1 and its related sequence may belong to a new class of proteins that function as transcriptional regulators of phase transition during shoot development."}

    OryzaGP_2021_v2

    {"project":"OryzaGP_2021_v2","denotations":[{"id":"T1","span":{"begin":0,"end":4},"obj":"http://identifiers.org/oryzabase.gene/8773"},{"id":"T2","span":{"begin":0,"end":4},"obj":"http://identifiers.org/oryzabase.gene/19256"},{"id":"T3","span":{"begin":534,"end":538},"obj":"http://identifiers.org/oryzabase.gene/8773"},{"id":"T4","span":{"begin":534,"end":538},"obj":"http://identifiers.org/oryzabase.gene/19256"},{"id":"T5","span":{"begin":698,"end":702},"obj":"http://identifiers.org/oryzabase.gene/8773"},{"id":"T6","span":{"begin":698,"end":702},"obj":"http://identifiers.org/oryzabase.gene/19256"},{"id":"T7","span":{"begin":809,"end":813},"obj":"http://identifiers.org/oryzabase.gene/8773"},{"id":"T8","span":{"begin":809,"end":813},"obj":"http://identifiers.org/oryzabase.gene/19256"},{"id":"T9","span":{"begin":943,"end":947},"obj":"http://identifiers.org/oryzabase.gene/8773"},{"id":"T10","span":{"begin":943,"end":947},"obj":"http://identifiers.org/oryzabase.gene/19256"},{"id":"T72412","span":{"begin":0,"end":4},"obj":"http://identifiers.org/rapdb.locus/Os01g0229300"},{"id":"T69716","span":{"begin":534,"end":538},"obj":"http://identifiers.org/rapdb.locus/Os01g0229300"},{"id":"T34767","span":{"begin":698,"end":702},"obj":"http://identifiers.org/rapdb.locus/Os01g0229300"},{"id":"T94353","span":{"begin":809,"end":813},"obj":"http://identifiers.org/rapdb.locus/Os01g0229300"},{"id":"T27818","span":{"begin":943,"end":947},"obj":"http://identifiers.org/rapdb.locus/Os01g0229300"}],"text":"EMF1, a novel protein involved in the control of shoot architecture and flowering in Arabidopsis.\nShoot architecture and flowering time in angiosperms depend on the balanced expression of a large number of flowering time and flower meristem identity genes. Loss-of-function mutations in the Arabidopsis EMBRYONIC FLOWER (EMF) genes cause Arabidopsis to eliminate rosette shoot growth and transform the apical meristem from indeterminate to determinate growth by producing a single terminal flower on all nodes. We have identified the EMF1 gene by positional cloning. The deduced polypeptide has no homology with any protein of known function except a putative protein in the rice genome with which EMF1 shares common motifs that include nuclear localization signals, P-loop, and LXXLL elements. Alteration of EMF1 expression in transgenic plants caused progressive changes in flowering time, shoot determinacy, and inflorescence architecture. EMF1 and its related sequence may belong to a new class of proteins that function as transcriptional regulators of phase transition during shoot development."}

    OryzaGP_2021_FLAIR

    {"project":"OryzaGP_2021_FLAIR","denotations":[{"id":"M_0","span":{"begin":303,"end":319},"obj":"hunflair:NA:Gene"},{"id":"M_1","span":{"begin":675,"end":679},"obj":"hunflair:NA:Species"},{"id":"M_2","span":{"begin":0,"end":4},"obj":"hunflair:NA:Gene"},{"id":"M_3","span":{"begin":534,"end":538},"obj":"hunflair:NA:Gene"},{"id":"M_4","span":{"begin":698,"end":702},"obj":"hunflair:NA:Gene"},{"id":"M_5","span":{"begin":809,"end":813},"obj":"hunflair:NA:Gene"},{"id":"M_6","span":{"begin":943,"end":947},"obj":"hunflair:NA:Gene"},{"id":"M_7","span":{"begin":321,"end":324},"obj":"hunflair:NA:Gene"},{"id":"M_8","span":{"begin":85,"end":96},"obj":"hunflair:NA:Species"},{"id":"M_9","span":{"begin":291,"end":302},"obj":"hunflair:NA:Species"},{"id":"M_10","span":{"begin":338,"end":349},"obj":"hunflair:NA:Species"}],"text":"EMF1, a novel protein involved in the control of shoot architecture and flowering in Arabidopsis.\nShoot architecture and flowering time in angiosperms depend on the balanced expression of a large number of flowering time and flower meristem identity genes. Loss-of-function mutations in the Arabidopsis EMBRYONIC FLOWER (EMF) genes cause Arabidopsis to eliminate rosette shoot growth and transform the apical meristem from indeterminate to determinate growth by producing a single terminal flower on all nodes. We have identified the EMF1 gene by positional cloning. The deduced polypeptide has no homology with any protein of known function except a putative protein in the rice genome with which EMF1 shares common motifs that include nuclear localization signals, P-loop, and LXXLL elements. Alteration of EMF1 expression in transgenic plants caused progressive changes in flowering time, shoot determinacy, and inflorescence architecture. EMF1 and its related sequence may belong to a new class of proteins that function as transcriptional regulators of phase transition during shoot development."}

    OryzaGP

    {"project":"OryzaGP","denotations":[{"id":"T1","span":{"begin":534,"end":538},"obj":"gene"},{"id":"T2","span":{"begin":698,"end":702},"obj":"gene"},{"id":"T3","span":{"begin":809,"end":813},"obj":"gene"},{"id":"T4","span":{"begin":943,"end":947},"obj":"gene"}],"text":"EMF1, a novel protein involved in the control of shoot architecture and flowering in Arabidopsis.\nShoot architecture and flowering time in angiosperms depend on the balanced expression of a large number of flowering time and flower meristem identity genes. Loss-of-function mutations in the Arabidopsis EMBRYONIC FLOWER (EMF) genes cause Arabidopsis to eliminate rosette shoot growth and transform the apical meristem from indeterminate to determinate growth by producing a single terminal flower on all nodes. We have identified the EMF1 gene by positional cloning. The deduced polypeptide has no homology with any protein of known function except a putative protein in the rice genome with which EMF1 shares common motifs that include nuclear localization signals, P-loop, and LXXLL elements. Alteration of EMF1 expression in transgenic plants caused progressive changes in flowering time, shoot determinacy, and inflorescence architecture. EMF1 and its related sequence may belong to a new class of proteins that function as transcriptional regulators of phase transition during shoot development."}