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PubMed:11479274 JSONTXT

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Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 568-574 http://purl.obolibrary.org/obo/MAT_0000490 denotes medial

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 28-43 FMAID:162311 denotes Golgi apparatus
_T2 229-231 FMAID:169149 denotes A1
_T3 261-266 FMAID:68646 denotes cells
_T4 261-266 FMAID:169002 denotes cells
_T5 551-562 FMAID:67103 denotes Golgi stack
_T6 551-562 FMAID:165050 denotes Golgi stack
_T7 568-574 FMAID:171165 denotes medial
_T8 568-574 FMAID:49444 denotes medial
_T9 847-856 FMAID:165070 denotes endosomal
_T10 847-856 FMAID:67180 denotes endosomal
_T11 883-885 FMAID:169149 denotes A1
_T12 898-910 FMAID:200942 denotes cell surface
_T13 898-910 FMAID:212684 denotes cell surface
_T14 903-910 FMAID:146300 denotes surface
_T15 903-910 FMAID:50594 denotes surface
_T16 951-962 FMAID:66856 denotes endoplasmic
_T17 951-962 FMAID:165003 denotes endoplasmic
_T18 951-972 FMAID:210679 denotes endoplasmic reticulum
_T19 951-972 FMAID:165144 denotes endoplasmic reticulum
_T20 951-972 FMAID:165141 denotes endoplasmic reticulum
_T21 951-972 FMAID:67434 denotes endoplasmic reticulum
_T22 951-972 FMAID:67438 denotes endoplasmic reticulum
_T23 951-972 FMAID:165142 denotes endoplasmic reticulum
_T24 951-972 FMAID:210694 denotes endoplasmic reticulum
_T25 951-972 FMAID:211269 denotes endoplasmic reticulum
_T26 951-972 FMAID:199093 denotes endoplasmic reticulum
_T27 951-972 FMAID:80351 denotes endoplasmic reticulum
_T28 951-972 FMAID:67429 denotes endoplasmic reticulum
_T29 951-972 FMAID:188464 denotes endoplasmic reticulum
_T30 951-972 FMAID:165026 denotes endoplasmic reticulum
_T31 951-972 FMAID:165250 denotes endoplasmic reticulum
_T32 951-972 FMAID:212510 denotes endoplasmic reticulum
_T33 951-972 FMAID:165027 denotes endoplasmic reticulum
_T34 951-972 FMAID:63842 denotes endoplasmic reticulum
_T35 951-972 FMAID:66897 denotes endoplasmic reticulum
_T36 951-972 FMAID:66898 denotes endoplasmic reticulum
_T37 951-972 FMAID:162308 denotes endoplasmic reticulum
_T38 963-972 FMAID:94520 denotes reticulum
_T39 963-972 FMAID:7646 denotes reticulum
_T40 977-992 FMAID:162311 denotes Golgi apparatus
_T41 1166-1171 FMAID:68646 denotes cells
_T42 1166-1171 FMAID:169002 denotes cells
_T43 1189-1192 FMAID:85816 denotes gas
_T44 1368-1383 FMAID:82742 denotes oligosaccharide
_T45 1368-1383 FMAID:196731 denotes oligosaccharide
_T46 1539-1554 FMAID:162311 denotes Golgi apparatus

uniprot-human

Id Subject Object Predicate Lexical cue
T1 195-206 http://www.uniprot.org/uniprot/P20648 denotes proton pump
T2 195-206 http://www.uniprot.org/uniprot/P54707 denotes proton pump
T3 408-443 http://www.uniprot.org/uniprot/Q10471 denotes N-acetylgalactosaminyltransferase 2
T4 408-443 http://www.uniprot.org/uniprot/Q8IZ52 denotes N-acetylgalactosaminyltransferase 2
T5 453-484 http://www.uniprot.org/uniprot/Q06430 denotes N-acetylglucosaminyltransferase
T6 453-484 http://www.uniprot.org/uniprot/Q8N0V5 denotes N-acetylglucosaminyltransferase
T7 453-484 http://www.uniprot.org/uniprot/Q8NFS9 denotes N-acetylglucosaminyltransferase

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 195-206 http://www.uniprot.org/uniprot/Q64436 denotes proton pump
T2 195-206 http://www.uniprot.org/uniprot/Q9Z1W8 denotes proton pump
T3 229-231 http://www.uniprot.org/uniprot/Q07440 denotes A1
T4 883-885 http://www.uniprot.org/uniprot/Q07440 denotes A1
T5 408-443 http://www.uniprot.org/uniprot/Q6IQX7 denotes N-acetylgalactosaminyltransferase 2
T6 453-484 http://www.uniprot.org/uniprot/P97402 denotes N-acetylglucosaminyltransferase
T7 500-521 http://www.uniprot.org/uniprot/P23336 denotes galactosyltransferase

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 195-201 http://purl.bioontology.org/ontology/NCBITAXON/429025 denotes proton
T2 261-266 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T3 1044-1052 http://purl.bioontology.org/ontology/NCBITAXON/68518 denotes electron
T4 1166-1171 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T5 1292-1296 http://purl.bioontology.org/ontology/NCBITAXON/82391 denotes days

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-135 Sentence denotes Neutralization of pH in the Golgi apparatus causes redistribution of glycosyltransferases and changes in the O-glycosylation of mucins.
TextSentencer_T2 136-332 Sentence denotes Addition of the weak base ammonium chloride (NH4Cl) or the proton pump inhibitor bafilomycin A1 to cultured HeLa and LS 174T cells effectively neutralized the pH gradient of the secretory pathway.
TextSentencer_T3 333-625 Sentence denotes This resulted in relocalization of the three studied glycosyltransferases, N-acetylgalactosaminyltransferase 2, beta1,2 N-acetylglucosaminyltransferase I, and beta1,4 galactosyltransferase 1, normally localized to the Golgi stack, the medial/trans-Golgi and the trans-Golgi/TGN, respectively.
TextSentencer_T4 626-920 Sentence denotes Indirect immunofluorescence microscopy, immunoelectron microscopy, and subcellular fractionation of the tagged or native glycosyltransferases showed that NH4Cl caused a relocalization of the enzymes mainly to vesicles of endosomal type, whereas bafilomycin A1 gave mainly cell surface staining.
TextSentencer_T5 921-1072 Sentence denotes The general morphology of the endoplasmic reticulum and Golgi apparatus was retained as judged from immunofluorescence and electron microscopy studies.
TextSentencer_T6 1073-1329 Sentence denotes When the O-glycans on the guanidinium chloride insoluble gel-forming mucins from the LS 174T cells were analyzed by gas chromatography-mass spectrometry after neutralization of the secretory pathway pH by NH4Cl over 10 days shorter O-glycans were observed.
TextSentencer_T7 1330-1405 Sentence denotes However, no decrease in the number of oligosaccharide chains was indicated.
TextSentencer_T8 1406-1671 Sentence denotes Together, the results suggest that pH is a contributing factor for proper steady-state distribution of glycosyltransferases over the Golgi apparatus and that altered pH may cause alterations in glycosylation possibly due to a relocalization of glycosyltransferases.
T1 0-135 Sentence denotes Neutralization of pH in the Golgi apparatus causes redistribution of glycosyltransferases and changes in the O-glycosylation of mucins.
T2 136-332 Sentence denotes Addition of the weak base ammonium chloride (NH4Cl) or the proton pump inhibitor bafilomycin A1 to cultured HeLa and LS 174T cells effectively neutralized the pH gradient of the secretory pathway.
T3 333-625 Sentence denotes This resulted in relocalization of the three studied glycosyltransferases, N-acetylgalactosaminyltransferase 2, beta1,2 N-acetylglucosaminyltransferase I, and beta1,4 galactosyltransferase 1, normally localized to the Golgi stack, the medial/trans-Golgi and the trans-Golgi/TGN, respectively.
T4 626-920 Sentence denotes Indirect immunofluorescence microscopy, immunoelectron microscopy, and subcellular fractionation of the tagged or native glycosyltransferases showed that NH4Cl caused a relocalization of the enzymes mainly to vesicles of endosomal type, whereas bafilomycin A1 gave mainly cell surface staining.
T5 921-1072 Sentence denotes The general morphology of the endoplasmic reticulum and Golgi apparatus was retained as judged from immunofluorescence and electron microscopy studies.
T6 1073-1329 Sentence denotes When the O-glycans on the guanidinium chloride insoluble gel-forming mucins from the LS 174T cells were analyzed by gas chromatography-mass spectrometry after neutralization of the secretory pathway pH by NH4Cl over 10 days shorter O-glycans were observed.
T7 1330-1405 Sentence denotes However, no decrease in the number of oligosaccharide chains was indicated.
T8 1406-1671 Sentence denotes Together, the results suggest that pH is a contributing factor for proper steady-state distribution of glycosyltransferases over the Golgi apparatus and that altered pH may cause alterations in glycosylation possibly due to a relocalization of glycosyltransferases.
T1 0-135 Sentence denotes Neutralization of pH in the Golgi apparatus causes redistribution of glycosyltransferases and changes in the O-glycosylation of mucins.
T2 136-332 Sentence denotes Addition of the weak base ammonium chloride (NH4Cl) or the proton pump inhibitor bafilomycin A1 to cultured HeLa and LS 174T cells effectively neutralized the pH gradient of the secretory pathway.
T3 333-625 Sentence denotes This resulted in relocalization of the three studied glycosyltransferases, N-acetylgalactosaminyltransferase 2, beta1,2 N-acetylglucosaminyltransferase I, and beta1,4 galactosyltransferase 1, normally localized to the Golgi stack, the medial/trans-Golgi and the trans-Golgi/TGN, respectively.
T4 626-920 Sentence denotes Indirect immunofluorescence microscopy, immunoelectron microscopy, and subcellular fractionation of the tagged or native glycosyltransferases showed that NH4Cl caused a relocalization of the enzymes mainly to vesicles of endosomal type, whereas bafilomycin A1 gave mainly cell surface staining.
T5 921-1072 Sentence denotes The general morphology of the endoplasmic reticulum and Golgi apparatus was retained as judged from immunofluorescence and electron microscopy studies.
T6 1073-1329 Sentence denotes When the O-glycans on the guanidinium chloride insoluble gel-forming mucins from the LS 174T cells were analyzed by gas chromatography-mass spectrometry after neutralization of the secretory pathway pH by NH4Cl over 10 days shorter O-glycans were observed.
T7 1330-1405 Sentence denotes However, no decrease in the number of oligosaccharide chains was indicated.
T8 1406-1671 Sentence denotes Together, the results suggest that pH is a contributing factor for proper steady-state distribution of glycosyltransferases over the Golgi apparatus and that altered pH may cause alterations in glycosylation possibly due to a relocalization of glycosyltransferases.

GO-BP

Id Subject Object Predicate Lexical cue
T1 111-124 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T2 1600-1613 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T3 253-255 http://purl.obolibrary.org/obo/GO_0016992 denotes LS
T4 1158-1160 http://purl.obolibrary.org/obo/GO_0016992 denotes LS
T5 453-486 http://purl.obolibrary.org/obo/GO_0003827 denotes N-acetylglucosaminyltransferase I
T6 534-543 http://purl.obolibrary.org/obo/GO_0051179 denotes localized
T7 534-556 http://purl.obolibrary.org/obo/GO_0051645 denotes localized to the Golgi
T8 933-972 http://purl.obolibrary.org/obo/GO_0007029 denotes morphology of the endoplasmic reticulum
T9 951-982 http://purl.obolibrary.org/obo/GO_0006888 denotes endoplasmic reticulum and Golgi
T10 1189-1192 http://purl.obolibrary.org/obo/GO_0034005 denotes gas

GO-CC

Id Subject Object Predicate Lexical cue
T1 28-33 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T2 551-556 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T3 581-586 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T4 601-606 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T5 977-982 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T6 1539-1544 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T7 28-43 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi apparatus
T8 977-992 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi apparatus
T9 1539-1554 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi apparatus
T10 195-206 http://purl.obolibrary.org/obo/GO_0005889 denotes proton pump
T11 261-266 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T12 898-902 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T13 551-562 http://purl.obolibrary.org/obo/GO_0005795 denotes Golgi stack
T14 607-610 http://purl.obolibrary.org/obo/GO_0005802 denotes TGN
T15 835-843 http://purl.obolibrary.org/obo/GO_0031982 denotes vesicles
T16 847-856 http://purl.obolibrary.org/obo/GO_0005768 denotes endosomal
T17 898-910 http://purl.obolibrary.org/obo/GO_0009986 denotes cell surface
T18 951-972 http://purl.obolibrary.org/obo/GO_0005783 denotes endoplasmic reticulum

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 568-574 http://purl.obolibrary.org/obo/UBERON_3010194 denotes medial

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 28-43 http://edamontology.org/topic_0616 denotes Golgi apparatus
T2 324-331 http://edamontology.org/topic_0602 denotes pathway
T3 378-385 http://edamontology.org/topic_3678 denotes studied
T4 654-664 http://edamontology.org/topic_3382 denotes microscopy
T5 654-691 http://edamontology.org/topic_0611 denotes microscopy, immunoelectron microscopy
T6 666-691 http://edamontology.org/topic_0611 denotes immunoelectron microscopy
T7 681-691 http://edamontology.org/topic_3382 denotes microscopy
T8 951-972 http://edamontology.org/topic_0616 denotes endoplasmic reticulum
T9 977-992 http://edamontology.org/topic_0616 denotes Golgi apparatus
T10 1044-1063 http://edamontology.org/topic_0611 denotes electron microscopy
T11 1053-1063 http://edamontology.org/topic_3382 denotes microscopy
T12 1064-1071 http://edamontology.org/topic_3678 denotes studies
T13 1208-1225 http://edamontology.org/topic_3520 denotes mass spectrometry
T14 1208-1225 http://edamontology.org/topic_0134 denotes mass spectrometry
T15 1264-1271 http://edamontology.org/topic_0602 denotes pathway
T16 1539-1554 http://edamontology.org/topic_0616 denotes Golgi apparatus

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 18-20 http://edamontology.org/format_1997 denotes pH
T2 295-297 http://edamontology.org/format_1997 denotes pH
T3 324-331 http://edamontology.org/data_2600 denotes pathway
T4 525-533 http://edamontology.org/operation_3435 denotes normally
T5 654-691 http://edamontology.org/data_0941 denotes microscopy, immunoelectron microscopy
T6 925-932 http://edamontology.org/operation_3429 denotes general
T7 1044-1063 http://edamontology.org/data_0941 denotes electron microscopy
T8 1208-1225 http://edamontology.org/data_2536 denotes mass spectrometry
T9 1208-1225 http://edamontology.org/data_3147 denotes mass spectrometry
T10 1264-1271 http://edamontology.org/data_2600 denotes pathway
T11 1272-1274 http://edamontology.org/format_1997 denotes pH
T12 1441-1443 http://edamontology.org/format_1997 denotes pH
T13 1572-1574 http://edamontology.org/format_1997 denotes pH

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 568-574 http://purl.obolibrary.org/obo/MAT_0000490 denotes medial

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 568-574 http://purl.obolibrary.org/obo/UBERON_3010194 denotes medial

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 568-574 Body_part denotes medial http://purl.obolibrary.org/obo/MAT_0000490

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 28-43 Body_part denotes Golgi apparatus http://purl.obolibrary.org/obo/GO_0005794
T2 551-556 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T3 581-586 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T4 601-606 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T5 963-972 Body_part denotes reticulum http://purl.obolibrary.org/obo/UBERON_0007361
T6 977-992 Body_part denotes Golgi apparatus http://purl.obolibrary.org/obo/GO_0005794
T7 1539-1554 Body_part denotes Golgi apparatus http://purl.obolibrary.org/obo/GO_0005794