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Inflammaging

Id Subject Object Predicate Lexical cue
T1 0-101 Sentence denotes [Eosinophilic bronchitis without asthma--an additional rare cause for chronic persistent cough (CPC)?
T2 102-206 Sentence denotes A 30-year old patient with severe CPC due to eosinophilic bronchitis without asthma or hyperreactivity].
T3 207-317 Sentence denotes Eosinophile Bronchitis ohne Asthma--Eine weitere, seltene Ursache des chronisch persistierenden Hustens (CPH)?
T4 318-432 Sentence denotes Ein 30-jähriger Patient mit schwerem CPH infolge einer eosinophilen Bronchitis ohne Asthma oder Hyperreagibilität.
T5 433-770 Sentence denotes In non-smokers the underlying causes for chronic persistent cough (CPC) e.g. chronic cough without diagnostic chest X-ray or pulmonary function test--are usually as follows: several common upper airways diseases, bronchial (cough type) asthma, gastrooesophageal reflux or treatment with an ACE (angiotensin converting enzyme)--inhibitor.
T6 771-821 Sentence denotes In 10% of CPC however the cause remains uncertain.
T7 822-915 Sentence denotes We report a 30 year old non-smoker with severe coughing and repeated vomiting for two months.
T8 916-1003 Sentence denotes No laboratory or technical data could be collected suggestive of a common cause of CPC:
T9 1004-1198 Sentence denotes Upper airways disease, bronchial flow limitation or hyperresponsiveness, ACE inhibitor medication, B. pertussis infection, gastrooesophageal reflux disease (by 24 hours pH-probe) were ruled out.
T10 1199-1403 Sentence denotes Fiberbronchoscopic findings remained unremarkable, except for the bronchial biopsy specimen, which showed moderate eosinophilic inflammation of the mucosa and marked thickening of the subepithelial layer.
T11 1404-1508 Sentence denotes Since the cough was non-productive, sputum induction with 3 ml nebulised 3% NaCl solution was performed.
T12 1509-1557 Sentence denotes 28% of the granulocytes were eosinophil stained.
T13 1558-1620 Sentence denotes A low quality morning sputum (< 1 ml) showed 21% eosinophilia.
T14 1621-1684 Sentence denotes Thus, the diagnosis of eosinophilic bronchitis was established.
T15 1685-1814 Sentence denotes 400 micrograms budesonide dry powder inhalations b.i.d. for one week resolved the cough, treatment was stopped after three weeks.
T16 1815-1855 Sentence denotes No recurrence was seen two months later.
T17 1856-2044 Sentence denotes Both the cough type asthma and the eosinophilic bronchitis could represent a form fruste of classical bronchial asthma beyond wheezing or dyspnoea, but with the common main symptom: cough.
T18 2045-2323 Sentence denotes Since hyperresponsiveness and cough are phenotypic hallmarks of cough variant asthma, in eosinophilic bronchitis--beside cough--another two features of asthma are present: eosinophilic inflammation of the mucosa along with sputum eosinophilia and subepithelial layer thickening.
T19 2324-2505 Sentence denotes Not surprisingly, eosinophilic bronchial inflammation could be shown in patients with cough variant asthma as well, who--up to 56% during a four year-period--develop classic asthma.
T20 2506-2577 Sentence denotes The long-term outcome of eosinophilic bronchitis is not known, however.
T21 2578-2715 Sentence denotes Thus, asthma, cough variant asthma and cough due to eosinophilic bronchitis can mirror different phenotypes or phases of the same entity.
T22 2716-2923 Sentence denotes CPC due to either the cough type asthma or the eosinophilic bronchitis is like asthma fast responding to inhalative steroids. (Induced) sputum staining should be added to the diagnostic armamentarium of CPC.
T1 0-101 Sentence denotes [Eosinophilic bronchitis without asthma--an additional rare cause for chronic persistent cough (CPC)?
T2 102-206 Sentence denotes A 30-year old patient with severe CPC due to eosinophilic bronchitis without asthma or hyperreactivity].
T3 207-317 Sentence denotes Eosinophile Bronchitis ohne Asthma--Eine weitere, seltene Ursache des chronisch persistierenden Hustens (CPH)?
T4 318-432 Sentence denotes Ein 30-jähriger Patient mit schwerem CPH infolge einer eosinophilen Bronchitis ohne Asthma oder Hyperreagibilität.
T5 433-770 Sentence denotes In non-smokers the underlying causes for chronic persistent cough (CPC) e.g. chronic cough without diagnostic chest X-ray or pulmonary function test--are usually as follows: several common upper airways diseases, bronchial (cough type) asthma, gastrooesophageal reflux or treatment with an ACE (angiotensin converting enzyme)--inhibitor.
T6 771-821 Sentence denotes In 10% of CPC however the cause remains uncertain.
T7 822-915 Sentence denotes We report a 30 year old non-smoker with severe coughing and repeated vomiting for two months.
T8 916-1003 Sentence denotes No laboratory or technical data could be collected suggestive of a common cause of CPC:
T9 1004-1198 Sentence denotes Upper airways disease, bronchial flow limitation or hyperresponsiveness, ACE inhibitor medication, B. pertussis infection, gastrooesophageal reflux disease (by 24 hours pH-probe) were ruled out.
T10 1199-1403 Sentence denotes Fiberbronchoscopic findings remained unremarkable, except for the bronchial biopsy specimen, which showed moderate eosinophilic inflammation of the mucosa and marked thickening of the subepithelial layer.
T11 1404-1508 Sentence denotes Since the cough was non-productive, sputum induction with 3 ml nebulised 3% NaCl solution was performed.
T12 1509-1557 Sentence denotes 28% of the granulocytes were eosinophil stained.
T13 1558-1620 Sentence denotes A low quality morning sputum (< 1 ml) showed 21% eosinophilia.
T14 1621-1684 Sentence denotes Thus, the diagnosis of eosinophilic bronchitis was established.
T15 1685-1814 Sentence denotes 400 micrograms budesonide dry powder inhalations b.i.d. for one week resolved the cough, treatment was stopped after three weeks.
T16 1815-1855 Sentence denotes No recurrence was seen two months later.
T17 1856-2044 Sentence denotes Both the cough type asthma and the eosinophilic bronchitis could represent a form fruste of classical bronchial asthma beyond wheezing or dyspnoea, but with the common main symptom: cough.
T18 2045-2323 Sentence denotes Since hyperresponsiveness and cough are phenotypic hallmarks of cough variant asthma, in eosinophilic bronchitis--beside cough--another two features of asthma are present: eosinophilic inflammation of the mucosa along with sputum eosinophilia and subepithelial layer thickening.
T19 2324-2505 Sentence denotes Not surprisingly, eosinophilic bronchial inflammation could be shown in patients with cough variant asthma as well, who--up to 56% during a four year-period--develop classic asthma.
T20 2506-2577 Sentence denotes The long-term outcome of eosinophilic bronchitis is not known, however.
T21 2578-2715 Sentence denotes Thus, asthma, cough variant asthma and cough due to eosinophilic bronchitis can mirror different phenotypes or phases of the same entity.
T22 2716-2923 Sentence denotes CPC due to either the cough type asthma or the eosinophilic bronchitis is like asthma fast responding to inhalative steroids. (Induced) sputum staining should be added to the diagnostic armamentarium of CPC.

PubCasesHPO

Id Subject Object Predicate Lexical cue
TI1 14-24 HP:0012387 denotes bronchitis
TI2 33-39 HP:0002099 denotes asthma
AB1 493-498 HP:0012735 denotes cough
AB2 518-523 HP:0012735 denotes cough
TI3 89-94 HP:0012735 denotes cough
TI4 160-170 HP:0012387 denotes bronchitis
TI5 179-185 HP:0002099 denotes asthma
AB3 657-662 HP:0012735 denotes cough
AB4 669-675 HP:0002099 denotes asthma
AB5 869-877 HP:0012735 denotes coughing
AB6 891-899 HP:0002013 denotes vomiting
AB7 1414-1419 HP:0012735 denotes cough
AB8 1607-1619 HP:0001880 denotes eosinophilia
AB9 1657-1667 HP:0012387 denotes bronchitis
AB10 1767-1772 HP:0012735 denotes cough
AB11 1865-1870 HP:0012735 denotes cough
AB12 1876-1882 HP:0002099 denotes asthma
AB13 1904-1914 HP:0012387 denotes bronchitis
AB14 1968-1974 HP:0002099 denotes asthma
AB15 1982-1990 HP:0030828 denotes wheezing
AB16 2038-2043 HP:0012735 denotes cough
AB17 2075-2080 HP:0012735 denotes cough
AB18 2109-2114 HP:0012735 denotes cough
AB19 2123-2129 HP:0002099 denotes asthma
AB20 2147-2157 HP:0012387 denotes bronchitis
AB21 2166-2171 HP:0012735 denotes cough
AB22 2197-2203 HP:0002099 denotes asthma
AB23 2275-2287 HP:0001880 denotes eosinophilia
AB24 2410-2415 HP:0012735 denotes cough
AB25 2424-2430 HP:0002099 denotes asthma
AB26 2498-2504 HP:0002099 denotes asthma
AB27 2544-2554 HP:0012387 denotes bronchitis
AB28 2584-2590 HP:0002099 denotes asthma
AB29 2592-2597 HP:0012735 denotes cough
AB30 2606-2612 HP:0002099 denotes asthma
AB31 2617-2622 HP:0012735 denotes cough
AB32 2643-2653 HP:0012387 denotes bronchitis
AB33 2738-2743 HP:0012735 denotes cough
AB34 2749-2755 HP:0002099 denotes asthma
AB35 2776-2786 HP:0012387 denotes bronchitis
AB36 2795-2801 HP:0002099 denotes asthma

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-101 Sentence denotes [Eosinophilic bronchitis without asthma--an additional rare cause for chronic persistent cough (CPC)?
TextSentencer_T2 102-206 Sentence denotes A 30-year old patient with severe CPC due to eosinophilic bronchitis without asthma or hyperreactivity].
TextSentencer_T3 207-317 Sentence denotes Eosinophile Bronchitis ohne Asthma--Eine weitere, seltene Ursache des chronisch persistierenden Hustens (CPH)?
TextSentencer_T4 318-432 Sentence denotes Ein 30-jähriger Patient mit schwerem CPH infolge einer eosinophilen Bronchitis ohne Asthma oder Hyperreagibilität.
TextSentencer_T5 433-770 Sentence denotes In non-smokers the underlying causes for chronic persistent cough (CPC) e.g. chronic cough without diagnostic chest X-ray or pulmonary function test--are usually as follows: several common upper airways diseases, bronchial (cough type) asthma, gastrooesophageal reflux or treatment with an ACE (angiotensin converting enzyme)--inhibitor.
TextSentencer_T6 771-821 Sentence denotes In 10% of CPC however the cause remains uncertain.
TextSentencer_T7 822-915 Sentence denotes We report a 30 year old non-smoker with severe coughing and repeated vomiting for two months.
TextSentencer_T8 916-1003 Sentence denotes No laboratory or technical data could be collected suggestive of a common cause of CPC:
TextSentencer_T9 1004-1198 Sentence denotes Upper airways disease, bronchial flow limitation or hyperresponsiveness, ACE inhibitor medication, B. pertussis infection, gastrooesophageal reflux disease (by 24 hours pH-probe) were ruled out.
TextSentencer_T10 1199-1403 Sentence denotes Fiberbronchoscopic findings remained unremarkable, except for the bronchial biopsy specimen, which showed moderate eosinophilic inflammation of the mucosa and marked thickening of the subepithelial layer.
TextSentencer_T11 1404-1508 Sentence denotes Since the cough was non-productive, sputum induction with 3 ml nebulised 3% NaCl solution was performed.
TextSentencer_T12 1509-1557 Sentence denotes 28% of the granulocytes were eosinophil stained.
TextSentencer_T13 1558-1620 Sentence denotes A low quality morning sputum (< 1 ml) showed 21% eosinophilia.
TextSentencer_T14 1621-1684 Sentence denotes Thus, the diagnosis of eosinophilic bronchitis was established.
TextSentencer_T15 1685-1814 Sentence denotes 400 micrograms budesonide dry powder inhalations b.i.d. for one week resolved the cough, treatment was stopped after three weeks.
TextSentencer_T16 1815-1855 Sentence denotes No recurrence was seen two months later.
TextSentencer_T17 1856-2044 Sentence denotes Both the cough type asthma and the eosinophilic bronchitis could represent a form fruste of classical bronchial asthma beyond wheezing or dyspnoea, but with the common main symptom: cough.
TextSentencer_T18 2045-2323 Sentence denotes Since hyperresponsiveness and cough are phenotypic hallmarks of cough variant asthma, in eosinophilic bronchitis--beside cough--another two features of asthma are present: eosinophilic inflammation of the mucosa along with sputum eosinophilia and subepithelial layer thickening.
TextSentencer_T19 2324-2505 Sentence denotes Not surprisingly, eosinophilic bronchial inflammation could be shown in patients with cough variant asthma as well, who--up to 56% during a four year-period--develop classic asthma.
TextSentencer_T20 2506-2577 Sentence denotes The long-term outcome of eosinophilic bronchitis is not known, however.
TextSentencer_T21 2578-2715 Sentence denotes Thus, asthma, cough variant asthma and cough due to eosinophilic bronchitis can mirror different phenotypes or phases of the same entity.
TextSentencer_T22 2716-2923 Sentence denotes CPC due to either the cough type asthma or the eosinophilic bronchitis is like asthma fast responding to inhalative steroids. (Induced) sputum staining should be added to the diagnostic armamentarium of CPC.
T1 0-101 Sentence denotes [Eosinophilic bronchitis without asthma--an additional rare cause for chronic persistent cough (CPC)?
T2 102-206 Sentence denotes A 30-year old patient with severe CPC due to eosinophilic bronchitis without asthma or hyperreactivity].
T3 207-317 Sentence denotes Eosinophile Bronchitis ohne Asthma--Eine weitere, seltene Ursache des chronisch persistierenden Hustens (CPH)?
T4 318-432 Sentence denotes Ein 30-jähriger Patient mit schwerem CPH infolge einer eosinophilen Bronchitis ohne Asthma oder Hyperreagibilität.
T5 433-770 Sentence denotes In non-smokers the underlying causes for chronic persistent cough (CPC) e.g. chronic cough without diagnostic chest X-ray or pulmonary function test--are usually as follows: several common upper airways diseases, bronchial (cough type) asthma, gastrooesophageal reflux or treatment with an ACE (angiotensin converting enzyme)--inhibitor.
T6 771-821 Sentence denotes In 10% of CPC however the cause remains uncertain.
T7 822-915 Sentence denotes We report a 30 year old non-smoker with severe coughing and repeated vomiting for two months.
T8 916-1003 Sentence denotes No laboratory or technical data could be collected suggestive of a common cause of CPC:
T9 1004-1198 Sentence denotes Upper airways disease, bronchial flow limitation or hyperresponsiveness, ACE inhibitor medication, B. pertussis infection, gastrooesophageal reflux disease (by 24 hours pH-probe) were ruled out.
T10 1199-1403 Sentence denotes Fiberbronchoscopic findings remained unremarkable, except for the bronchial biopsy specimen, which showed moderate eosinophilic inflammation of the mucosa and marked thickening of the subepithelial layer.
T11 1404-1508 Sentence denotes Since the cough was non-productive, sputum induction with 3 ml nebulised 3% NaCl solution was performed.
T12 1509-1557 Sentence denotes 28% of the granulocytes were eosinophil stained.
T13 1558-1620 Sentence denotes A low quality morning sputum (< 1 ml) showed 21% eosinophilia.
T14 1621-1684 Sentence denotes Thus, the diagnosis of eosinophilic bronchitis was established.
T15 1685-1814 Sentence denotes 400 micrograms budesonide dry powder inhalations b.i.d. for one week resolved the cough, treatment was stopped after three weeks.
T16 1815-1855 Sentence denotes No recurrence was seen two months later.
T17 1856-2044 Sentence denotes Both the cough type asthma and the eosinophilic bronchitis could represent a form fruste of classical bronchial asthma beyond wheezing or dyspnoea, but with the common main symptom: cough.
T18 2045-2323 Sentence denotes Since hyperresponsiveness and cough are phenotypic hallmarks of cough variant asthma, in eosinophilic bronchitis--beside cough--another two features of asthma are present: eosinophilic inflammation of the mucosa along with sputum eosinophilia and subepithelial layer thickening.
T19 2324-2505 Sentence denotes Not surprisingly, eosinophilic bronchial inflammation could be shown in patients with cough variant asthma as well, who--up to 56% during a four year-period--develop classic asthma.
T20 2506-2577 Sentence denotes The long-term outcome of eosinophilic bronchitis is not known, however.
T21 2578-2715 Sentence denotes Thus, asthma, cough variant asthma and cough due to eosinophilic bronchitis can mirror different phenotypes or phases of the same entity.
T22 2716-2923 Sentence denotes CPC due to either the cough type asthma or the eosinophilic bronchitis is like asthma fast responding to inhalative steroids. (Induced) sputum staining should be added to the diagnostic armamentarium of CPC.

UBERON-AE

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 543-548 http://purl.obolibrary.org/obo/UBERON_0001443 denotes chest
PD-UBERON-AE-B_T2 891-899 http://purl.obolibrary.org/obo/UBERON_0000172 denotes vomiting
PD-UBERON-AE-B_T3 1347-1353 http://purl.obolibrary.org/obo/UBERON_0000344 denotes mucosa
PD-UBERON-AE-B_T4 2250-2256 http://purl.obolibrary.org/obo/UBERON_0000344 denotes mucosa
PD-UBERON-AE-B_T5 1440-1446 http://purl.obolibrary.org/obo/UBERON_0007311 denotes sputum
PD-UBERON-AE-B_T6 1580-1586 http://purl.obolibrary.org/obo/UBERON_0007311 denotes sputum
PD-UBERON-AE-B_T7 2268-2274 http://purl.obolibrary.org/obo/UBERON_0007311 denotes sputum
PD-UBERON-AE-B_T8 2852-2858 http://purl.obolibrary.org/obo/UBERON_0007311 denotes sputum

PubCasesORDO

Id Subject Object Predicate Lexical cue
AB1 1106-1115 ORDO:1489 denotes pertussis

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 543-548 http://purl.obolibrary.org/obo/UBERON_0001443 denotes chest
PD-UBERON-AE-B_T2 1347-1353 http://purl.obolibrary.org/obo/UBERON_0000344 denotes mucosa
PD-UBERON-AE-B_T3 2250-2256 http://purl.obolibrary.org/obo/UBERON_0000344 denotes mucosa
PD-UBERON-AE-B_T4 891-899 http://purl.obolibrary.org/obo/UBERON_0000172 denotes vomiting
PD-UBERON-AE-B_T5 1440-1446 http://purl.obolibrary.org/obo/UBERON_0007311 denotes sputum
PD-UBERON-AE-B_T6 1580-1586 http://purl.obolibrary.org/obo/UBERON_0007311 denotes sputum
PD-UBERON-AE-B_T7 2268-2274 http://purl.obolibrary.org/obo/UBERON_0007311 denotes sputum
PD-UBERON-AE-B_T8 2852-2858 http://purl.obolibrary.org/obo/UBERON_0007311 denotes sputum