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PubMed:11425801 JSONTXT

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GlyCosmos6-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 54-67 Body_part denotes mammary gland http://purl.obolibrary.org/obo/UBERON_0001911|http://purl.obolibrary.org/obo/UBERON_0005200
T3 352-358 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T4 500-513 Body_part denotes mammary gland http://purl.obolibrary.org/obo/UBERON_0001911|http://purl.obolibrary.org/obo/UBERON_0005200
T6 574-587 Body_part denotes mammary gland http://purl.obolibrary.org/obo/UBERON_0001911|http://purl.obolibrary.org/obo/UBERON_0005200
T8 1067-1073 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T9 1520-1526 Body_part denotes breast http://purl.obolibrary.org/obo/UBERON_0000310
T10 1639-1645 Body_part denotes breast http://purl.obolibrary.org/obo/UBERON_0000310
T11 1656-1660 Body_part denotes cell http://purl.obolibrary.org/obo/CL_0000000
T12 1777-1781 Body_part denotes cell http://purl.obolibrary.org/obo/CL_0000000
T13 1850-1856 Body_part denotes breast http://purl.obolibrary.org/obo/UBERON_0000310
T14 2149-2162 Body_part denotes mammary gland http://purl.obolibrary.org/obo/UBERON_0001911|http://purl.obolibrary.org/obo/UBERON_0005200
T16 2221-2225 Body_part denotes cell http://purl.obolibrary.org/obo/CL_0000000

Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 146-157 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 352-358 http://purl.bioontology.org/ontology/STY/T024 denotes tissue NCBItxid:10088|NCBItxid:10090
T2 1067-1073 http://purl.bioontology.org/ontology/STY/T024 denotes tissue
T3 1271-1278 http://purl.bioontology.org/ontology/STY/T024 denotes tissues NCBItxid:10088|NCBItxid:10090
T4 1302-1311 http://purl.bioontology.org/ontology/NCBITAXON/189528 denotes indicated
T5 1912-1920 http://purl.bioontology.org/ontology/NCBITAXON/189528 denotes indicate NCBItxid:10088|NCBItxid:10090
T6 1349-1356 http://purl.bioontology.org/ontology/NCBITAXON/6754 denotes cancers
T7 1403-1408 http://purl.bioontology.org/ontology/STY/T016 denotes human NCBItxid:10088|NCBItxid:10090
T1 0-5 OrganismTaxon denotes Mouse NCBItxid:10088|NCBItxid:10090
T3 494-499 OrganismTaxon denotes mouse NCBItxid:10088|NCBItxid:10090
T5 689-694 OrganismTaxon denotes mouse NCBItxid:10088|NCBItxid:10090
T7 1265-1270 OrganismTaxon denotes mouse NCBItxid:10088|NCBItxid:10090
T9 1391-1395 OrganismTaxon denotes rats NCBItxid:10114|NCBItxid:10116|NCBItxid:10118
T12 1403-1408 OrganismTaxon denotes human NCBItxid:9606
T13 1514-1519 OrganismTaxon denotes mouse NCBItxid:10088|NCBItxid:10090
T15 1844-1849 OrganismTaxon denotes mouse NCBItxid:10088|NCBItxid:10090

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 146-157 Glycan_Motif denotes sialic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 146-157 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-78 Sentence denotes Mouse ST6Gal sialyltransferase gene expression during mammary gland lactation.
TextSentencer_T2 79-242 Sentence denotes The sialyltransferase ST6Gal mediates the biosynthetic addition of sialic acid, via an alpha2,6 linkage, to the nonreducing end of terminal lactosamine structures.
TextSentencer_T3 243-392 Sentence denotes Transcription of the murine ST6Gal gene, Siat1, is regulated by the selective use of multiple promoters in a tissue- and development-specific manner.
TextSentencer_T4 393-514 Sentence denotes Here we report that Siat1 mRNA expression is dramatically elevated in lactating (relative to virgin) mouse mammary gland.
TextSentencer_T5 515-801 Sentence denotes The predominant ST6Gal mRNA species expressed in lactating mammary gland is a heretofore undocumented isoform containing a unique 5'-untranslated region originating from the mouse Siat1 genetic region, now defined as Exon L, residing 549-bp 5' of the previously characterized Exon X(2).
TextSentencer_T6 802-1019 Sentence denotes Thus, the novel ST6Gal mRNA form initiates transcription from the region designated as p4 and incorporates the unique sequence from Exon L in 5'-juxtaposition to commonly shared sequences encoded on Exon I to Exon VI.
TextSentencer_T7 1020-1175 Sentence denotes In contrast, cells derived from virgin mammary tissue expressed only the housekeeping mRNA form derived from p3, with Exon O sequence preceding Exons I-VI.
TextSentencer_T8 1176-1279 Sentence denotes The Exon L-containing, p4 class of mRNA was also not detected in a survey of eight other mouse tissues.
TextSentencer_T9 1280-1418 Sentence denotes Previous reports have indicated a strong correlation between mammary cancers and elevated ST6Gal expression in rats and in human patients.
TextSentencer_T10 1419-1614 Sentence denotes However, we uncovered neither elevated expression of ST6Gal mRNA nor appearance of p4 class in mouse breast carcinomas experimentally induced by transformation with the polyoma-middle T oncogene.
TextSentencer_T11 1615-1731 Sentence denotes A number of established breast carcinoma cell lines were also examined, with ST6Gal mRNA and activity generally low.
TextSentencer_T12 1732-1886 Sentence denotes Moreover, with the exception of the Shionogi cell line, p4 class of ST6Gal mRNA was not expressed in any of the mouse breast carcinoma specimens examined.
TextSentencer_T13 1887-2032 Sentence denotes Taken together, our data indicate that murine ST6Gal induction during lactation is achieved by de novo recruitment of a normally silent promoter.
TextSentencer_T14 2033-2178 Sentence denotes Furthermore, the data provide no support for elevated Siat1 expression on the mRNA level in association with murine mammary gland carcinogenesis.
TextSentencer_T15 2179-2344 Sentence denotes With the single exception of the Shionogi cell line, the p3 class remains the predominant ST6Gal mRNA expressed in all other murine mammary carcinoma cells examined.
T1 0-78 Sentence denotes Mouse ST6Gal sialyltransferase gene expression during mammary gland lactation.
T2 79-242 Sentence denotes The sialyltransferase ST6Gal mediates the biosynthetic addition of sialic acid, via an alpha2,6 linkage, to the nonreducing end of terminal lactosamine structures.
T3 243-392 Sentence denotes Transcription of the murine ST6Gal gene, Siat1, is regulated by the selective use of multiple promoters in a tissue- and development-specific manner.
T4 393-514 Sentence denotes Here we report that Siat1 mRNA expression is dramatically elevated in lactating (relative to virgin) mouse mammary gland.
T5 515-801 Sentence denotes The predominant ST6Gal mRNA species expressed in lactating mammary gland is a heretofore undocumented isoform containing a unique 5'-untranslated region originating from the mouse Siat1 genetic region, now defined as Exon L, residing 549-bp 5' of the previously characterized Exon X(2).
T6 802-1019 Sentence denotes Thus, the novel ST6Gal mRNA form initiates transcription from the region designated as p4 and incorporates the unique sequence from Exon L in 5'-juxtaposition to commonly shared sequences encoded on Exon I to Exon VI.
T7 1020-1175 Sentence denotes In contrast, cells derived from virgin mammary tissue expressed only the housekeeping mRNA form derived from p3, with Exon O sequence preceding Exons I-VI.
T8 1176-1279 Sentence denotes The Exon L-containing, p4 class of mRNA was also not detected in a survey of eight other mouse tissues.
T9 1280-1418 Sentence denotes Previous reports have indicated a strong correlation between mammary cancers and elevated ST6Gal expression in rats and in human patients.
T10 1419-1614 Sentence denotes However, we uncovered neither elevated expression of ST6Gal mRNA nor appearance of p4 class in mouse breast carcinomas experimentally induced by transformation with the polyoma-middle T oncogene.
T11 1615-1731 Sentence denotes A number of established breast carcinoma cell lines were also examined, with ST6Gal mRNA and activity generally low.
T12 1732-1886 Sentence denotes Moreover, with the exception of the Shionogi cell line, p4 class of ST6Gal mRNA was not expressed in any of the mouse breast carcinoma specimens examined.
T13 1887-2032 Sentence denotes Taken together, our data indicate that murine ST6Gal induction during lactation is achieved by de novo recruitment of a normally silent promoter.
T14 2033-2178 Sentence denotes Furthermore, the data provide no support for elevated Siat1 expression on the mRNA level in association with murine mammary gland carcinogenesis.
T15 2179-2344 Sentence denotes With the single exception of the Shionogi cell line, the p3 class remains the predominant ST6Gal mRNA expressed in all other murine mammary carcinoma cells examined.
T1 0-78 Sentence denotes Mouse ST6Gal sialyltransferase gene expression during mammary gland lactation.
T2 79-242 Sentence denotes The sialyltransferase ST6Gal mediates the biosynthetic addition of sialic acid, via an alpha2,6 linkage, to the nonreducing end of terminal lactosamine structures.
T3 243-392 Sentence denotes Transcription of the murine ST6Gal gene, Siat1, is regulated by the selective use of multiple promoters in a tissue- and development-specific manner.
T4 393-514 Sentence denotes Here we report that Siat1 mRNA expression is dramatically elevated in lactating (relative to virgin) mouse mammary gland.
T5 515-801 Sentence denotes The predominant ST6Gal mRNA species expressed in lactating mammary gland is a heretofore undocumented isoform containing a unique 5'-untranslated region originating from the mouse Siat1 genetic region, now defined as Exon L, residing 549-bp 5' of the previously characterized Exon X(2).
T6 802-1019 Sentence denotes Thus, the novel ST6Gal mRNA form initiates transcription from the region designated as p4 and incorporates the unique sequence from Exon L in 5'-juxtaposition to commonly shared sequences encoded on Exon I to Exon VI.
T7 1020-1175 Sentence denotes In contrast, cells derived from virgin mammary tissue expressed only the housekeeping mRNA form derived from p3, with Exon O sequence preceding Exons I-VI.
T8 1176-1279 Sentence denotes The Exon L-containing, p4 class of mRNA was also not detected in a survey of eight other mouse tissues.
T9 1280-1418 Sentence denotes Previous reports have indicated a strong correlation between mammary cancers and elevated ST6Gal expression in rats and in human patients.
T10 1419-1614 Sentence denotes However, we uncovered neither elevated expression of ST6Gal mRNA nor appearance of p4 class in mouse breast carcinomas experimentally induced by transformation with the polyoma-middle T oncogene.
T11 1615-1731 Sentence denotes A number of established breast carcinoma cell lines were also examined, with ST6Gal mRNA and activity generally low.
T12 1732-1886 Sentence denotes Moreover, with the exception of the Shionogi cell line, p4 class of ST6Gal mRNA was not expressed in any of the mouse breast carcinoma specimens examined.
T13 1887-2032 Sentence denotes Taken together, our data indicate that murine ST6Gal induction during lactation is achieved by de novo recruitment of a normally silent promoter.
T14 2033-2178 Sentence denotes Furthermore, the data provide no support for elevated Siat1 expression on the mRNA level in association with murine mammary gland carcinogenesis.
T15 2179-2344 Sentence denotes With the single exception of the Shionogi cell line, the p3 class remains the predominant ST6Gal mRNA expressed in all other murine mammary carcinoma cells examined.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 54-67 http://purl.obolibrary.org/obo/MAT_0000073 denotes mammary gland
T2 62-67 http://purl.obolibrary.org/obo/MAT_0000021 denotes gland
T3 500-513 http://purl.obolibrary.org/obo/MAT_0000073 denotes mammary gland
T4 508-513 http://purl.obolibrary.org/obo/MAT_0000021 denotes gland
T5 574-587 http://purl.obolibrary.org/obo/MAT_0000073 denotes mammary gland
T6 582-587 http://purl.obolibrary.org/obo/MAT_0000021 denotes gland
T7 2149-2162 http://purl.obolibrary.org/obo/MAT_0000073 denotes mammary gland
T8 2157-2162 http://purl.obolibrary.org/obo/MAT_0000021 denotes gland

GlyCosmos6-CLO

Id Subject Object Predicate Lexical cue
T1 0-5 http://purl.obolibrary.org/obo/CLO_0007836 denotes Mouse
T2 494-499 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T3 689-694 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T4 1033-1038 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5 1265-1270 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T6 1514-1519 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T7 1656-1660 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T8 1708-1716 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T9 1777-1781 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T10 1844-1849 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T11 2221-2225 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T12 2329-2334 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 1341-1356 Disease denotes mammary cancers http://purl.obolibrary.org/obo/MONDO_0007254
T2 1520-1537 Disease denotes breast carcinomas http://purl.obolibrary.org/obo/MONDO_0004989
T3 1639-1655 Disease denotes breast carcinoma http://purl.obolibrary.org/obo/MONDO_0004989
T4 1850-1866 Disease denotes breast carcinoma http://purl.obolibrary.org/obo/MONDO_0004989
T5 2311-2328 Disease denotes mammary carcinoma http://purl.obolibrary.org/obo/MONDO_0004989

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T18 582-587 FMAID:86294 denotes gland
_T1 31-35 FMAID:198663 denotes gene
_T2 54-67 FMAID:157661 denotes mammary gland
_T3 62-67 FMAID:86294 denotes gland
_T4 62-67 FMAID:200677 denotes gland
_T5 62-67 FMAID:172512 denotes gland
_T6 219-230 FMAID:82792 denotes lactosamine
_T7 219-230 FMAID:196787 denotes lactosamine
_T8 278-282 FMAID:198663 denotes gene
_T9 352-358 FMAID:256050 denotes tissue
_T10 500-513 FMAID:157661 denotes mammary gland
_T11 508-513 FMAID:86294 denotes gland
_T12 508-513 FMAID:172512 denotes gland
_T13 508-513 FMAID:200677 denotes gland
_T14 564-587 FMAID:57991 denotes lactating mammary gland
_T15 564-587 FMAID:157669 denotes lactating mammary gland
_T16 574-587 FMAID:157661 denotes mammary gland
_T17 582-587 FMAID:200677 denotes gland
_T19 582-587 FMAID:172512 denotes gland
_T20 732-736 FMAID:198073 denotes Exon
_T21 732-736 FMAID:84120 denotes Exon
_T22 791-795 FMAID:198073 denotes Exon
_T23 791-795 FMAID:84120 denotes Exon
_T24 934-938 FMAID:198073 denotes Exon
_T25 934-938 FMAID:84120 denotes Exon
_T26 1001-1005 FMAID:198073 denotes Exon
_T27 1001-1005 FMAID:84120 denotes Exon
_T28 1011-1015 FMAID:84120 denotes Exon
_T29 1011-1015 FMAID:198073 denotes Exon
_T30 1033-1038 FMAID:68646 denotes cells
_T31 1033-1038 FMAID:169002 denotes cells
_T32 1067-1073 FMAID:256050 denotes tissue
_T33 1138-1142 FMAID:198073 denotes Exon
_T34 1138-1142 FMAID:84120 denotes Exon
_T35 1164-1169 FMAID:84120 denotes Exons
_T36 1164-1169 FMAID:198073 denotes Exons
_T37 1180-1184 FMAID:84120 denotes Exon
_T38 1180-1184 FMAID:198073 denotes Exon
_T39 1271-1278 FMAID:256050 denotes tissues
_T40 1520-1526 FMAID:9601 denotes breast
_T41 1520-1526 FMAID:97486 denotes breast
_T42 1596-1602 FMAID:74544 denotes middle
_T43 1596-1602 FMAID:179281 denotes middle
_T44 1639-1645 FMAID:97486 denotes breast
_T45 1639-1645 FMAID:9601 denotes breast
_T46 1850-1856 FMAID:97486 denotes breast
_T47 1850-1856 FMAID:9601 denotes breast
_T48 2149-2162 FMAID:157661 denotes mammary gland
_T49 2157-2162 FMAID:172512 denotes gland
_T50 2157-2162 FMAID:86294 denotes gland
_T51 2157-2162 FMAID:200677 denotes gland
_T52 2329-2334 FMAID:68646 denotes cells
_T53 2329-2334 FMAID:169002 denotes cells

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 284-289 http://www.uniprot.org/uniprot/Q64685 denotes Siat1
T2 413-418 http://www.uniprot.org/uniprot/Q64685 denotes Siat1
T3 695-700 http://www.uniprot.org/uniprot/Q64685 denotes Siat1
T4 2087-2092 http://www.uniprot.org/uniprot/Q64685 denotes Siat1

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 352-358 http://purl.bioontology.org/ontology/STY/T024 denotes tissue
T2 1033-1038 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T3 1067-1073 http://purl.bioontology.org/ontology/STY/T024 denotes tissue
T4 1271-1278 http://purl.bioontology.org/ontology/STY/T024 denotes tissues
T5 1349-1356 http://purl.bioontology.org/ontology/NCBITAXON/6754 denotes cancers
T6 1527-1537 http://purl.bioontology.org/ontology/NCBITAXON/166034 denotes carcinomas
T7 1646-1655 http://purl.bioontology.org/ontology/NCBITAXON/166034 denotes carcinoma
T8 1857-1866 http://purl.bioontology.org/ontology/NCBITAXON/166034 denotes carcinoma
T9 2319-2328 http://purl.bioontology.org/ontology/NCBITAXON/166034 denotes carcinoma
T10 2329-2334 http://purl.bioontology.org/ontology/STY/T025 denotes cells

GO-BP

Id Subject Object Predicate Lexical cue
T1 31-46 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T2 68-77 http://purl.obolibrary.org/obo/GO_0007595 denotes lactation
T3 463-472 http://purl.obolibrary.org/obo/GO_0007595 denotes lactating
T4 564-573 http://purl.obolibrary.org/obo/GO_0007595 denotes lactating
T5 243-256 http://purl.obolibrary.org/obo/GO_0006351 denotes Transcription
T6 845-858 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T7 294-303 http://purl.obolibrary.org/obo/GO_0065007 denotes regulated
T8 352-375 http://purl.obolibrary.org/obo/GO_0009888 denotes tissue- and development
T9 364-375 http://purl.obolibrary.org/obo/GO_0032502 denotes development

GO-CC

Id Subject Object Predicate Lexical cue
T1 1033-1038 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T2 1656-1660 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T3 1777-1781 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T4 2221-2225 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T5 1484-1487 http://purl.obolibrary.org/obo/GO_0005731 denotes nor

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 54-67 http://purl.obolibrary.org/obo/UBERON_0001911 denotes mammary gland
T2 500-513 http://purl.obolibrary.org/obo/UBERON_0001911 denotes mammary gland
T3 574-587 http://purl.obolibrary.org/obo/UBERON_0001911 denotes mammary gland
T4 2149-2162 http://purl.obolibrary.org/obo/UBERON_0001911 denotes mammary gland
T5 62-67 http://purl.obolibrary.org/obo/UBERON_0002530 denotes gland
T6 508-513 http://purl.obolibrary.org/obo/UBERON_0002530 denotes gland
T7 582-587 http://purl.obolibrary.org/obo/UBERON_0002530 denotes gland
T8 2157-2162 http://purl.obolibrary.org/obo/UBERON_0002530 denotes gland
T9 352-358 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
T10 1067-1073 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
T11 1271-1278 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues
T12 1520-1526 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
T13 1639-1645 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
T14 1850-1856 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 31-46 http://edamontology.org/topic_0203 denotes gene expression
T2 175-182 http://edamontology.org/topic_0102 denotes linkage
T3 210-218 http://edamontology.org/topic_0749 denotes terminal
T4 243-256 http://edamontology.org/topic_0203 denotes Transcription
T5 243-256 http://edamontology.org/topic_0110 denotes Transcription
T6 243-256 http://edamontology.org/topic_3308 denotes Transcription
T7 243-256 http://edamontology.org/topic_3512 denotes Transcription
T8 337-346 http://edamontology.org/topic_1312 denotes promoters
T9 337-346 http://edamontology.org/topic_0111 denotes promoters
T10 337-346 http://edamontology.org/topic_0749 denotes promoters
T11 701-708 http://edamontology.org/topic_3053 denotes genetic
T12 732-736 http://edamontology.org/topic_2397 denotes Exon
T13 732-736 http://edamontology.org/topic_3512 denotes Exon
T14 791-795 http://edamontology.org/topic_3512 denotes Exon
T15 791-795 http://edamontology.org/topic_2397 denotes Exon
T16 845-858 http://edamontology.org/topic_0110 denotes transcription
T17 845-858 http://edamontology.org/topic_0203 denotes transcription
T18 845-858 http://edamontology.org/topic_3512 denotes transcription
T19 845-863 http://edamontology.org/topic_3308 denotes transcription from
T20 920-928 http://edamontology.org/topic_3168 denotes sequence
T21 920-928 http://edamontology.org/topic_0080 denotes sequence
T22 934-938 http://edamontology.org/topic_2397 denotes Exon
T23 934-938 http://edamontology.org/topic_3512 denotes Exon
T24 980-989 http://edamontology.org/topic_3168 denotes sequences
T25 980-989 http://edamontology.org/topic_0080 denotes sequences
T26 1001-1005 http://edamontology.org/topic_2397 denotes Exon
T27 1001-1005 http://edamontology.org/topic_3512 denotes Exon
T28 1011-1015 http://edamontology.org/topic_3512 denotes Exon
T29 1011-1015 http://edamontology.org/topic_2397 denotes Exon
T30 1138-1142 http://edamontology.org/topic_3512 denotes Exon
T31 1138-1142 http://edamontology.org/topic_2397 denotes Exon
T32 1145-1153 http://edamontology.org/topic_0080 denotes sequence
T33 1145-1153 http://edamontology.org/topic_3168 denotes sequence
T34 1164-1169 http://edamontology.org/topic_2397 denotes Exons
T35 1164-1169 http://edamontology.org/topic_3512 denotes Exons
T36 1180-1184 http://edamontology.org/topic_3512 denotes Exon
T37 1180-1184 http://edamontology.org/topic_2397 denotes Exon
T38 1349-1356 http://edamontology.org/topic_2640 denotes cancers
T39 1403-1408 http://edamontology.org/topic_2815 denotes human
T40 2023-2031 http://edamontology.org/topic_0749 denotes promoter
T41 2023-2031 http://edamontology.org/topic_0111 denotes promoter
T42 2023-2031 http://edamontology.org/topic_1312 denotes promoter

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 231-241 http://edamontology.org/data_0883 denotes structures
T2 401-407 http://edamontology.org/data_2048 denotes report
T3 740-748 http://edamontology.org/data_2619 denotes residing
T4 875-885 http://edamontology.org/operation_2430 denotes designated
T5 920-928 http://edamontology.org/operation_3218 denotes sequence
T6 920-928 http://edamontology.org/data_2044 denotes sequence
T7 980-989 http://edamontology.org/data_2044 denotes sequences
T8 980-989 http://edamontology.org/operation_3218 denotes sequences
T9 1145-1153 http://edamontology.org/data_2044 denotes sequence
T10 1145-1153 http://edamontology.org/operation_3218 denotes sequence
T11 1229-1237 http://edamontology.org/operation_2423 denotes detected
T12 1289-1296 http://edamontology.org/data_2048 denotes reports
T13 1321-1332 http://edamontology.org/operation_3465 denotes correlation
T14 1717-1726 http://edamontology.org/operation_3429 denotes generally
T15 1907-1911 http://edamontology.org/data_0006 denotes data
T16 2007-2015 http://edamontology.org/operation_3435 denotes normally
T17 2050-2054 http://edamontology.org/data_0006 denotes data

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
11425801-13#54#59#gene6480 2087-2092 gene6480 denotes Siat1
11425801-13#130#144#diseaseC0596263 2163-2177 diseaseC0596263 denotes carcinogenesis
54#59#gene6480130#144#diseaseC0596263 11425801-13#54#59#gene6480 11425801-13#130#144#diseaseC0596263 associated_with Siat1,carcinogenesis

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 54-67 http://purl.obolibrary.org/obo/MAT_0000073 denotes mammary gland
T2 62-67 http://purl.obolibrary.org/obo/MAT_0000021 denotes gland
T3 500-513 http://purl.obolibrary.org/obo/MAT_0000073 denotes mammary gland
T4 508-513 http://purl.obolibrary.org/obo/MAT_0000021 denotes gland
T5 574-587 http://purl.obolibrary.org/obo/MAT_0000073 denotes mammary gland
T6 582-587 http://purl.obolibrary.org/obo/MAT_0000021 denotes gland
T7 2149-2162 http://purl.obolibrary.org/obo/MAT_0000073 denotes mammary gland
T8 2157-2162 http://purl.obolibrary.org/obo/MAT_0000021 denotes gland

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 352-358 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T2 1067-1073 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T3 1271-1278 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues
PD-UBERON-AE-B_T4 1520-1526 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T5 1639-1645 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T6 1850-1856 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T7 62-67 http://purl.obolibrary.org/obo/UBERON_0002530 denotes gland
PD-UBERON-AE-B_T8 508-513 http://purl.obolibrary.org/obo/UBERON_0002530 denotes gland
PD-UBERON-AE-B_T9 582-587 http://purl.obolibrary.org/obo/UBERON_0002530 denotes gland
PD-UBERON-AE-B_T10 2157-2162 http://purl.obolibrary.org/obo/UBERON_0002530 denotes gland
PD-UBERON-AE-B_T11 54-67 http://purl.obolibrary.org/obo/UBERON_0001911 denotes mammary gland
PD-UBERON-AE-B_T12 500-513 http://purl.obolibrary.org/obo/UBERON_0001911 denotes mammary gland
PD-UBERON-AE-B_T13 574-587 http://purl.obolibrary.org/obo/UBERON_0001911 denotes mammary gland
PD-UBERON-AE-B_T14 2149-2162 http://purl.obolibrary.org/obo/UBERON_0001911 denotes mammary gland

GlycoBiology-Motifs

Id Subject Object Predicate Lexical cue
T1 219-230 http://rdf.glycoinfo.org/glycan/G00055MO denotes lactosamine

GlyTouCan-IUPAC

Id Subject Object Predicate Lexical cue
GlycanIUPAC_T1 2294-2297 "http://rdf.glycoinfo.org/glycan/G41652MJ" denotes all
GlycanIUPAC_T2 2294-2297 "http://rdf.glycoinfo.org/glycan/G20761YC" denotes all
GlycanIUPAC_T3 2294-2297 "http://rdf.glycoinfo.org/glycan/G19807HM" denotes all
GlycanIUPAC_T4 2294-2297 "http://rdf.glycoinfo.org/glycan/G20351TE" denotes all
GlycanIUPAC_T5 2294-2297 "http://rdf.glycoinfo.org/glycan/G71957MR" denotes all
GlycanIUPAC_T6 2294-2297 "http://rdf.glycoinfo.org/glycan/G59040AE" denotes all
GlycanIUPAC_T7 2294-2297 "http://rdf.glycoinfo.org/glycan/G14987PW" denotes all
GlycanIUPAC_T8 2294-2297 "http://rdf.glycoinfo.org/glycan/G95064PC" denotes all
GlycanIUPAC_T9 2294-2297 "http://rdf.glycoinfo.org/glycan/G39143AQ" denotes all
GlycanIUPAC_T10 2294-2297 "http://rdf.glycoinfo.org/glycan/G65149OO" denotes all
GlycanIUPAC_T11 2294-2297 "http://rdf.glycoinfo.org/glycan/G02766SY" denotes all
GlycanIUPAC_T12 2294-2297 "http://rdf.glycoinfo.org/glycan/G26019KJ" denotes all
GlycanIUPAC_T13 2294-2297 "http://rdf.glycoinfo.org/glycan/G36429CZ" denotes all
GlycanIUPAC_T14 2294-2297 "http://rdf.glycoinfo.org/glycan/G89633TP" denotes all
GlycanIUPAC_T15 2294-2297 "http://rdf.glycoinfo.org/glycan/G28494FO" denotes all
GlycanIUPAC_T16 2294-2297 "http://rdf.glycoinfo.org/glycan/G06219CP" denotes all
GlycanIUPAC_T17 2294-2297 "http://rdf.glycoinfo.org/glycan/G44237SM" denotes all
GlycanIUPAC_T18 2294-2297 "http://rdf.glycoinfo.org/glycan/G57948RL" denotes all
GlycanIUPAC_T19 2294-2297 "http://rdf.glycoinfo.org/glycan/G64016DN" denotes all
GlycanIUPAC_T20 2294-2297 "http://rdf.glycoinfo.org/glycan/G14536PC" denotes all
GlycanIUPAC_T21 2294-2297 "http://rdf.glycoinfo.org/glycan/G14356FW" denotes all
GlycanIUPAC_T22 2294-2297 "http://rdf.glycoinfo.org/glycan/G34565UO" denotes all
GlycanIUPAC_T23 2294-2297 "http://rdf.glycoinfo.org/glycan/G67124MW" denotes all
GlycanIUPAC_T24 2294-2297 "http://rdf.glycoinfo.org/glycan/G71457ZU" denotes all
GlycanIUPAC_T25 2294-2297 "http://rdf.glycoinfo.org/glycan/G55228VZ" denotes all
GlycanIUPAC_T26 2294-2297 "http://rdf.glycoinfo.org/glycan/G31034MJ" denotes all
GlycanIUPAC_T27 2294-2297 "http://rdf.glycoinfo.org/glycan/G25776IP" denotes all
GlycanIUPAC_T28 2294-2297 "http://rdf.glycoinfo.org/glycan/G64442BV" denotes all
GlycanIUPAC_T29 2294-2297 "http://rdf.glycoinfo.org/glycan/G57018LE" denotes all
GlycanIUPAC_T30 2294-2297 "http://rdf.glycoinfo.org/glycan/G61761GX" denotes all
GlycanIUPAC_T31 2294-2297 "http://rdf.glycoinfo.org/glycan/G76318UX" denotes all
GlycanIUPAC_T32 2294-2297 "http://rdf.glycoinfo.org/glycan/G61906ER" denotes all
GlycanIUPAC_T33 2294-2297 "http://rdf.glycoinfo.org/glycan/G68723GR" denotes all
GlycanIUPAC_T34 2294-2297 "http://rdf.glycoinfo.org/glycan/G19540LE" denotes all
GlycanIUPAC_T35 2294-2297 "http://rdf.glycoinfo.org/glycan/G74944PO" denotes all
GlycanIUPAC_T36 2294-2297 "http://rdf.glycoinfo.org/glycan/G89489ZJ" denotes all
GlycanIUPAC_T37 2294-2297 "http://rdf.glycoinfo.org/glycan/G04434YU" denotes all
GlycanIUPAC_T38 2294-2297 "http://rdf.glycoinfo.org/glycan/G21450PB" denotes all
GlycanIUPAC_T39 2294-2297 "http://rdf.glycoinfo.org/glycan/G93629QY" denotes all
GlycanIUPAC_T40 2294-2297 "http://rdf.glycoinfo.org/glycan/G02603TR" denotes all
GlycanIUPAC_T41 2294-2297 "http://rdf.glycoinfo.org/glycan/G40280JP" denotes all
GlycanIUPAC_T42 2294-2297 "http://rdf.glycoinfo.org/glycan/G95259IC" denotes all
GlycanIUPAC_T43 2294-2297 "http://rdf.glycoinfo.org/glycan/G26900FE" denotes all
GlycanIUPAC_T44 2294-2297 "http://rdf.glycoinfo.org/glycan/G21346KK" denotes all
GlycanIUPAC_T45 2294-2297 "http://rdf.glycoinfo.org/glycan/G62509FF" denotes all
GlycanIUPAC_T46 2294-2297 "http://rdf.glycoinfo.org/glycan/G83932AK" denotes all
GlycanIUPAC_T47 2294-2297 "http://rdf.glycoinfo.org/glycan/G96978IB" denotes all
GlycanIUPAC_T48 2294-2297 "http://rdf.glycoinfo.org/glycan/G34275DN" denotes all
GlycanIUPAC_T49 2294-2297 "http://rdf.glycoinfo.org/glycan/G07071JF" denotes all
GlycanIUPAC_T50 2294-2297 "http://rdf.glycoinfo.org/glycan/G80639QD" denotes all
GlycanIUPAC_T51 2294-2297 "http://rdf.glycoinfo.org/glycan/G99460PJ" denotes all
GlycanIUPAC_T52 2294-2297 "http://rdf.glycoinfo.org/glycan/G22024BZ" denotes all
GlycanIUPAC_T53 2294-2297 "http://rdf.glycoinfo.org/glycan/G74097ZY" denotes all
GlycanIUPAC_T54 2294-2297 "http://rdf.glycoinfo.org/glycan/G84439YP" denotes all
GlycanIUPAC_T55 2294-2297 "http://rdf.glycoinfo.org/glycan/G52207WQ" denotes all
GlycanIUPAC_T56 2294-2297 "http://rdf.glycoinfo.org/glycan/G90695MS" denotes all
GlycanIUPAC_T57 2294-2297 "http://rdf.glycoinfo.org/glycan/G50398QX" denotes all
GlycanIUPAC_T58 2294-2297 "http://rdf.glycoinfo.org/glycan/G12166ZT" denotes all
GlycanIUPAC_T59 2294-2297 "http://rdf.glycoinfo.org/glycan/G48368BR" denotes all
GlycanIUPAC_T60 2294-2297 "http://rdf.glycoinfo.org/glycan/G57407RW" denotes all
GlycanIUPAC_T61 2294-2297 "http://rdf.glycoinfo.org/glycan/G00386TY" denotes all
GlycanIUPAC_T62 2294-2297 "http://rdf.glycoinfo.org/glycan/G18723JK" denotes all
GlycanIUPAC_T63 2294-2297 "http://rdf.glycoinfo.org/glycan/G93757OR" denotes all
GlycanIUPAC_T64 2294-2297 "http://rdf.glycoinfo.org/glycan/G29006SI" denotes all
GlycanIUPAC_T65 2294-2297 "http://rdf.glycoinfo.org/glycan/G03099OQ" denotes all
GlycanIUPAC_T66 2294-2297 "http://rdf.glycoinfo.org/glycan/G53739OW" denotes all
GlycanIUPAC_T67 2294-2297 "http://rdf.glycoinfo.org/glycan/G70440ZO" denotes all
GlycanIUPAC_T68 2294-2297 "http://rdf.glycoinfo.org/glycan/G29951RR" denotes all
GlycanIUPAC_T69 2294-2297 "http://rdf.glycoinfo.org/glycan/G58402TI" denotes all
GlycanIUPAC_T70 2294-2297 "http://rdf.glycoinfo.org/glycan/G39875TP" denotes all
GlycanIUPAC_T71 2294-2297 "http://rdf.glycoinfo.org/glycan/G83439QV" denotes all
GlycanIUPAC_T72 2294-2297 "http://rdf.glycoinfo.org/glycan/G41762RC" denotes all
GlycanIUPAC_T73 2294-2297 "http://rdf.glycoinfo.org/glycan/G91604UI" denotes all
GlycanIUPAC_T74 2294-2297 "http://rdf.glycoinfo.org/glycan/G88447WE" denotes all
GlycanIUPAC_T75 2294-2297 "http://rdf.glycoinfo.org/glycan/G93634BS" denotes all
GlycanIUPAC_T76 2294-2297 "http://rdf.glycoinfo.org/glycan/G02587BH" denotes all
GlycanIUPAC_T77 2294-2297 "http://rdf.glycoinfo.org/glycan/G43511MX" denotes all
GlycanIUPAC_T78 2294-2297 "http://rdf.glycoinfo.org/glycan/G64958DH" denotes all
GlycanIUPAC_T79 2294-2297 "http://rdf.glycoinfo.org/glycan/G30384TR" denotes all
GlycanIUPAC_T80 2294-2297 "http://rdf.glycoinfo.org/glycan/G15624EX" denotes all
GlycanIUPAC_T81 2294-2297 "http://rdf.glycoinfo.org/glycan/G22706ST" denotes all
GlycanIUPAC_T82 2294-2297 "http://rdf.glycoinfo.org/glycan/G57408PI" denotes all
GlycanIUPAC_T83 2294-2297 "http://rdf.glycoinfo.org/glycan/G86403XX" denotes all
GlycanIUPAC_T84 2294-2297 "http://rdf.glycoinfo.org/glycan/G78043YB" denotes all
GlycanIUPAC_T85 2294-2297 "http://rdf.glycoinfo.org/glycan/G18952JK" denotes all
GlycanIUPAC_T86 2294-2297 "http://rdf.glycoinfo.org/glycan/G49020ND" denotes all
GlycanIUPAC_T87 2294-2297 "http://rdf.glycoinfo.org/glycan/G63590YW" denotes all
GlycanIUPAC_T88 2294-2297 "http://rdf.glycoinfo.org/glycan/G22793KS" denotes all
GlycanIUPAC_T89 2294-2297 "http://rdf.glycoinfo.org/glycan/G64134SS" denotes all
GlycanIUPAC_T90 2294-2297 "http://rdf.glycoinfo.org/glycan/G17338HY" denotes all
GlycanIUPAC_T91 2294-2297 "http://rdf.glycoinfo.org/glycan/G99745XF" denotes all
GlycanIUPAC_T92 2294-2297 "http://rdf.glycoinfo.org/glycan/G27782HN" denotes all
GlycanIUPAC_T93 2294-2297 "http://rdf.glycoinfo.org/glycan/G57496DC" denotes all
GlycanIUPAC_T94 2294-2297 "http://rdf.glycoinfo.org/glycan/G93169WB" denotes all
GlycanIUPAC_T95 2294-2297 "http://rdf.glycoinfo.org/glycan/G05518TD" denotes all
GlycanIUPAC_T96 2294-2297 "http://rdf.glycoinfo.org/glycan/G62603DN" denotes all
GlycanIUPAC_T97 2294-2297 "http://rdf.glycoinfo.org/glycan/G59574FS" denotes all
GlycanIUPAC_T98 2294-2297 "http://rdf.glycoinfo.org/glycan/G47567WC" denotes all

DisGeNET

Id Subject Object Predicate Lexical cue
T0 2087-2092 gene:6480 denotes Siat1
T1 2163-2177 disease:C0596263 denotes carcinogenesis
R1 T0 T1 associated_with Siat1,carcinogenesis