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PubMed:11418240 JSONTXT

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Oryza-OGER

Id Subject Object Predicate Lexical cue
T1 0-13 ANT denotes Mitochondrial
T2 0-13 RF1 denotes Mitochondrial
T3 0-13 FDH denotes Mitochondrial
T4 0-13 SDH1 denotes Mitochondrial
T5 0-22 http://purl.obolibrary.org/obo/SO_0000737 denotes Mitochondrial sequence
T6 14-22 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T7 32-42 http://purl.obolibrary.org/obo/SO_0001633 denotes downstream
T8 43-47 http://www.uniprot.org/uniprot/A7MBU6 denotes to a
T9 56-64 http://purl.obolibrary.org/obo/GO_0000219 denotes V-ATPase
T10 56-64 http://purl.obolibrary.org/obo/GO_0008245 denotes V-ATPase
T11 58-64 http://www.uniprot.org/uniprot/A3DIJ8 denotes ATPase
T12 58-64 ATP denotes ATPase
T13 58-64 http://www.uniprot.org/uniprot/Q9SIY3 denotes ATPase
T14 58-64 http://id.nlm.nih.gov/mesh/D000251 denotes ATPase
T15 67-71 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T16 121-137 http://purl.obolibrary.org/obo/SO_0000738 denotes nuclear sequence
T17 129-137 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T18 151-164 ANT denotes mitochondrial
T19 151-164 RF1 denotes mitochondrial
T20 151-164 FDH denotes mitochondrial
T21 151-164 SDH1 denotes mitochondrial
T22 151-168 http://purl.obolibrary.org/obo/GO_0000262 denotes mitochondrial DNA
T23 151-168 http://id.nlm.nih.gov/mesh/D004272 denotes mitochondrial DNA
T24 151-168 http://purl.obolibrary.org/obo/SO_0001032 denotes mitochondrial DNA
T25 165-168 http://id.nlm.nih.gov/mesh/D004247 denotes DNA
T26 165-168 http://purl.obolibrary.org/obo/SO_0000352 denotes DNA
T27 165-168 http://purl.obolibrary.org/obo/GO_0005574 denotes DNA
T28 165-168 http://purl.obolibrary.org/obo/CHEBI_16991 denotes DNA
T29 169-177 http://purl.obolibrary.org/obo/SO_0000731 denotes fragment
T30 178-181 http://purl.obolibrary.org/obo/PR_000017371 denotes was
T31 178-181 http://purl.obolibrary.org/obo/PR_P42768 denotes was
T32 178-181 http://purl.obolibrary.org/obo/PR_P70315 denotes was
T33 178-181 http://id.nlm.nih.gov/mesh/D014923 denotes was
T34 196-200 http://id.nlm.nih.gov/mesh/D012275 denotes rice
T35 196-200 http://purl.bioontology.org/ontology/RXNORM/1311040 denotes rice
T36 196-200 http://www.ncbi.nlm.nih.gov/taxonomy/4530 denotes rice
T37 202-212 http://purl.obolibrary.org/obo/CHEBI_36976 denotes Nucleotide
T38 213-221 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T39 248-252 http://id.nlm.nih.gov/mesh/D018076 denotes cDNA
T40 248-252 http://purl.obolibrary.org/obo/SO_0000756 denotes cDNA
T41 248-258 http://purl.obolibrary.org/obo/SO_0000317 denotes cDNA clone
T42 253-258 http://purl.obolibrary.org/obo/SO_0000151 denotes clone
T43 253-262 http://web.expasy.org/cellosaurus/CVCL_7252 denotes clone #21
T44 273-286 ANT denotes mitochondrial
T45 273-286 RF1 denotes mitochondrial
T46 273-286 FDH denotes mitochondrial
T47 273-286 SDH1 denotes mitochondrial
T48 273-295 http://purl.obolibrary.org/obo/SO_0000737 denotes mitochondrial sequence
T49 287-295 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T50 296-306 http://purl.obolibrary.org/obo/SO_0000857 denotes homologous
T51 314-315 AMT1;2 denotes 3
T52 332-337 http://purl.obolibrary.org/obo/PR_P67899 denotes rps19
T53 332-337 http://purl.obolibrary.org/obo/PR_P39018 denotes rps19
T54 332-337 http://purl.obolibrary.org/obo/PR_Q23889 denotes rps19
T55 332-337 http://purl.obolibrary.org/obo/PR_P39019 denotes rps19
T56 332-337 RPS19.P denotes rps19
T57 332-337 http://purl.obolibrary.org/obo/PR_P56808 denotes rps19
T58 332-337 http://purl.obolibrary.org/obo/PR_P17074 denotes rps19
T59 332-337 RPS19 denotes rps19
T60 332-337 http://purl.obolibrary.org/obo/PR_000014261 denotes rps19
T61 332-337 http://purl.obolibrary.org/obo/PR_P39697 denotes rps19
T62 332-337 http://purl.obolibrary.org/obo/PR_Q7KS38 denotes rps19
T63 332-337 http://purl.obolibrary.org/obo/PR_Q54X51 denotes rps19
T64 332-337 http://purl.obolibrary.org/obo/PR_P58234 denotes rps19
T65 332-337 http://purl.obolibrary.org/obo/PR_O18650 denotes rps19
T66 332-337 http://purl.obolibrary.org/obo/PR_Q9CZX8 denotes rps19
T67 338-342 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T68 377-381 http://purl.obolibrary.org/obo/PR_P05750 denotes rps3
T69 377-381 http://purl.obolibrary.org/obo/PR_Q39214 denotes rps3
T70 377-381 http://purl.obolibrary.org/obo/PR_P23396 denotes rps3
T71 377-381 http://purl.obolibrary.org/obo/PR_P62909 denotes rps3
T72 377-381 RPS3 denotes rps3
T73 377-381 http://purl.obolibrary.org/obo/PR_P90526 denotes rps3
T74 377-381 http://purl.obolibrary.org/obo/PR_Q95749 denotes rps3
T75 377-381 http://purl.obolibrary.org/obo/PR_P62908 denotes rps3
T76 377-381 http://purl.obolibrary.org/obo/PR_P56798 denotes rps3
T77 377-381 http://purl.obolibrary.org/obo/PR_O60128 denotes rps3
T78 377-381 http://purl.obolibrary.org/obo/PR_P48152 denotes rps3
T79 377-381 http://purl.obolibrary.org/obo/PR_Q06559 denotes rps3
T80 377-381 http://purl.obolibrary.org/obo/PR_000014275 denotes rps3
T81 380-381 AMT1;2 denotes 3
T82 382-386 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T83 392-405 ANT denotes mitochondrial
T84 392-405 RF1 denotes mitochondrial
T85 392-405 FDH denotes mitochondrial
T86 392-405 SDH1 denotes mitochondrial
T87 392-414 http://purl.obolibrary.org/obo/SO_0000737 denotes mitochondrial sequence
T88 406-414 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T89 432-441 http://purl.obolibrary.org/obo/SO_0000077 denotes antisense
T90 455-463 http://purl.obolibrary.org/obo/SO_0000001 denotes Sequence
T91 455-474 http://purl.obolibrary.org/obo/SO_0002072 denotes Sequence comparison
T92 486-490 http://id.nlm.nih.gov/mesh/D018076 denotes cDNA
T93 486-490 http://purl.obolibrary.org/obo/SO_0000756 denotes cDNA
T94 509-522 ANT denotes mitochondrial
T95 509-522 RF1 denotes mitochondrial
T96 509-522 FDH denotes mitochondrial
T97 509-522 SDH1 denotes mitochondrial
T98 509-531 http://purl.obolibrary.org/obo/SO_0000737 denotes mitochondrial sequence
T99 523-531 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T100 609-612 http://purl.obolibrary.org/obo/PR_Q9NZC7 denotes for
T101 609-612 http://purl.obolibrary.org/obo/PR_000001036 denotes for
T102 615-619 http://purl.obolibrary.org/obo/PR_Q9V853 denotes lack
T103 626-629 http://purl.obolibrary.org/obo/GO_0005562 denotes RNA
T104 626-629 http://purl.obolibrary.org/obo/PR_000023786 denotes RNA
T105 626-629 http://purl.obolibrary.org/obo/SO_0000356 denotes RNA
T106 626-629 http://purl.obolibrary.org/obo/CHEBI_33697 denotes RNA
T107 626-629 http://purl.obolibrary.org/obo/PR_P21338 denotes RNA
T108 626-629 http://id.nlm.nih.gov/mesh/D012313 denotes RNA
T109 626-637 http://purl.obolibrary.org/obo/GO_0009451 denotes RNA editing
T110 644-647 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T111 644-647 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T112 665-670 http://purl.obolibrary.org/obo/CHEBI_24433 denotes group
T113 665-673 http://www.ncbi.nlm.nih.gov/taxonomy/1334 denotes group II
T114 665-680 http://purl.obolibrary.org/obo/SO_0000603 denotes group II intron
T115 674-680 http://purl.obolibrary.org/obo/SO_0001627 denotes intron
T116 674-680 http://purl.obolibrary.org/obo/SO_0000188 denotes intron
T117 681-689 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T118 717-725 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T119 726-729 http://purl.obolibrary.org/obo/PR_000017371 denotes was
T120 726-729 http://purl.obolibrary.org/obo/PR_P42768 denotes was
T121 726-729 http://purl.obolibrary.org/obo/PR_P70315 denotes was
T122 726-729 http://id.nlm.nih.gov/mesh/D014923 denotes was
T123 747-760 http://purl.obolibrary.org/obo/GO_0005739 denotes mitochondrion
T124 768-775 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus
T125 768-775 http://purl.obolibrary.org/obo/CHEBI_33252 denotes nucleus
T126 768-775 http://purl.obolibrary.org/obo/UBERON_0000125 denotes nucleus
T127 780-783 http://id.nlm.nih.gov/mesh/D004247 denotes DNA
T128 780-783 http://purl.obolibrary.org/obo/SO_0000352 denotes DNA
T129 780-783 http://purl.obolibrary.org/obo/GO_0005574 denotes DNA
T130 780-783 http://purl.obolibrary.org/obo/CHEBI_16991 denotes DNA
T131 796-799 http://purl.obolibrary.org/obo/GO_0005562 denotes RNA
T132 796-799 http://purl.obolibrary.org/obo/PR_000023786 denotes RNA
T133 796-799 http://purl.obolibrary.org/obo/SO_0000356 denotes RNA
T134 796-799 http://purl.obolibrary.org/obo/CHEBI_33697 denotes RNA
T135 796-799 http://purl.obolibrary.org/obo/PR_P21338 denotes RNA
T136 796-799 http://id.nlm.nih.gov/mesh/D012313 denotes RNA
T137 806-818 http://purl.obolibrary.org/obo/SO_0000933 denotes intermediate
T138 824-832 http://purl.obolibrary.org/obo/SO_0001635 denotes upstream
T139 833-839 http://purl.obolibrary.org/obo/SO_0000839 denotes region
T140 833-839 http://purl.obolibrary.org/obo/SO_0000001 denotes region
T141 847-859 http://purl.obolibrary.org/obo/GO_0005739 denotes mitochondria
T142 868-876 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T143 907-927 http://id.nlm.nih.gov/mesh/D025262 denotes vacuolar H(+)-ATPase
T144 916-927 http://id.nlm.nih.gov/mesh/D006180 denotes H(+)-ATPase
T145 921-927 http://www.uniprot.org/uniprot/A3DIJ8 denotes ATPase
T146 921-927 ATP denotes ATPase
T147 921-927 http://www.uniprot.org/uniprot/Q9SIY3 denotes ATPase
T148 921-927 http://id.nlm.nih.gov/mesh/D000251 denotes ATPase
T149 939-947 http://purl.obolibrary.org/obo/GO_0000219 denotes V-ATPase
T150 939-947 http://purl.obolibrary.org/obo/GO_0008245 denotes V-ATPase
T151 941-947 http://www.uniprot.org/uniprot/A3DIJ8 denotes ATPase
T152 941-947 ATP denotes ATPase
T153 941-947 http://www.uniprot.org/uniprot/Q9SIY3 denotes ATPase
T154 941-947 http://id.nlm.nih.gov/mesh/D000251 denotes ATPase
T155 951-955 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T156 983-991 http://purl.obolibrary.org/obo/GO_0000219 denotes V-ATPase
T157 983-991 http://purl.obolibrary.org/obo/GO_0008245 denotes V-ATPase
T158 985-991 http://www.uniprot.org/uniprot/A3DIJ8 denotes ATPase
T159 985-991 ATP denotes ATPase
T160 985-991 http://www.uniprot.org/uniprot/Q9SIY3 denotes ATPase
T161 985-991 http://id.nlm.nih.gov/mesh/D000251 denotes ATPase
T162 994-998 http://id.nlm.nih.gov/mesh/D018076 denotes cDNA
T163 994-998 http://purl.obolibrary.org/obo/SO_0000756 denotes cDNA
T164 999-1002 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T165 999-1002 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T166 1031-1035 http://id.nlm.nih.gov/mesh/D018076 denotes cDNA
T167 1031-1035 http://purl.obolibrary.org/obo/SO_0000756 denotes cDNA
T168 1055-1065 http://purl.obolibrary.org/obo/CHEBI_36976 denotes nucleotide
T169 1093-1097 http://purl.obolibrary.org/obo/PR_000023162 denotes many
T170 1093-1097 http://purl.obolibrary.org/obo/PR_P69801 denotes many
T171 1112-1116 http://www.uniprot.org/uniprot/O73737 denotes stop
T172 1112-1116 http://www.uniprot.org/uniprot/Q7TSJ2 denotes stop
T173 1112-1116 http://www.uniprot.org/uniprot/Q63560 denotes stop
T174 1112-1116 http://www.uniprot.org/uniprot/B0S4Q5 denotes stop
T175 1112-1116 http://www.uniprot.org/uniprot/Q96JE9 denotes stop
T176 1112-1116 http://purl.obolibrary.org/obo/PR_000010147 denotes stop
T177 1112-1123 http://id.nlm.nih.gov/mesh/D018388 denotes stop codons
T178 1117-1123 http://id.nlm.nih.gov/mesh/D003062 denotes codons
T179 1135-1139 http://id.nlm.nih.gov/mesh/D018076 denotes cDNA
T180 1135-1139 http://purl.obolibrary.org/obo/SO_0000756 denotes cDNA
T181 1141-1145 http://purl.obolibrary.org/obo/PR_000024065 denotes This
T182 1141-1145 http://purl.obolibrary.org/obo/PR_O32583 denotes This
T183 1169-1173 http://id.nlm.nih.gov/mesh/D018076 denotes cDNA
T184 1169-1173 http://purl.obolibrary.org/obo/SO_0000756 denotes cDNA
T185 1174-1182 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T186 1186-1189 http://purl.obolibrary.org/obo/PR_Q9VVR1 denotes not
T187 1186-1189 http://purl.obolibrary.org/obo/PR_000011409 denotes not
T188 1186-1189 http://purl.obolibrary.org/obo/PR_P43354 denotes not
T189 1186-1189 http://purl.obolibrary.org/obo/PR_000003944 denotes not
T190 1186-1189 http://purl.obolibrary.org/obo/PR_Q5TIS6 denotes not
T191 1186-1189 http://purl.obolibrary.org/obo/PR_Q92685 denotes not
T192 1186-1189 http://purl.obolibrary.org/obo/PR_Q8K2A8 denotes not
T193 1186-1189 http://purl.obolibrary.org/obo/PR_000011336 denotes not
T194 1259-1265 http://purl.obolibrary.org/obo/SO_0001627 denotes intron
T195 1259-1265 http://purl.obolibrary.org/obo/SO_0000188 denotes intron
T196 1287-1291 http://id.nlm.nih.gov/mesh/D018076 denotes cDNA
T197 1287-1291 http://purl.obolibrary.org/obo/SO_0000756 denotes cDNA
T198 1316-1324 http://purl.obolibrary.org/obo/GO_0000219 denotes V-ATPase
T199 1316-1324 http://purl.obolibrary.org/obo/GO_0008245 denotes V-ATPase
T200 1318-1324 http://www.uniprot.org/uniprot/A3DIJ8 denotes ATPase
T201 1318-1324 ATP denotes ATPase
T202 1318-1324 http://www.uniprot.org/uniprot/Q9SIY3 denotes ATPase
T203 1318-1324 http://id.nlm.nih.gov/mesh/D000251 denotes ATPase
T204 1327-1331 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T205 1332-1335 http://www.uniprot.org/uniprot/Q7CZN9 denotes has
T206 1332-1335 http://www.uniprot.org/uniprot/B9JD11 denotes has
T207 1332-1335 http://purl.obolibrary.org/obo/PR_Q92839 denotes has
T208 1332-1335 http://www.uniprot.org/uniprot/B2S532 denotes has
T209 1332-1335 http://www.uniprot.org/uniprot/B7HMD0 denotes has
T210 1332-1335 http://www.uniprot.org/uniprot/Q2K9W9 denotes has
T211 1332-1335 http://www.uniprot.org/uniprot/A4ILW9 denotes has
T212 1332-1335 http://www.uniprot.org/uniprot/C0RIC2 denotes has
T213 1332-1335 http://www.uniprot.org/uniprot/A0AKG4 denotes has
T214 1332-1335 http://www.uniprot.org/uniprot/A5EKD5 denotes has
T215 1332-1335 http://www.uniprot.org/uniprot/Q2GCS4 denotes has
T216 1332-1335 http://www.uniprot.org/uniprot/C1EPW0 denotes has
T217 1332-1335 http://www.uniprot.org/uniprot/Q0AIG6 denotes has
T218 1332-1335 http://www.uniprot.org/uniprot/Q8ER78 denotes has
T219 1332-1335 http://www.uniprot.org/uniprot/B9DPV8 denotes has
T220 1332-1335 http://www.uniprot.org/uniprot/B7IVI3 denotes has
T221 1332-1335 http://www.uniprot.org/uniprot/A0RHW4 denotes has
T222 1332-1335 http://www.uniprot.org/uniprot/C3MA28 denotes has
T223 1332-1335 http://www.uniprot.org/uniprot/Q73HV8 denotes has
T224 1332-1335 http://www.uniprot.org/uniprot/Q5FG54 denotes has
T225 1332-1335 http://www.uniprot.org/uniprot/A7X127 denotes has
T226 1332-1335 http://www.uniprot.org/uniprot/A1USH8 denotes has
T227 1332-1335 http://www.uniprot.org/uniprot/Q635Y0 denotes has
T228 1332-1335 http://www.uniprot.org/uniprot/B1M282 denotes has
T229 1332-1335 http://www.uniprot.org/uniprot/Q165T0 denotes has
T230 1332-1335 http://www.uniprot.org/uniprot/B6IUZ7 denotes has
T231 1332-1335 http://www.uniprot.org/uniprot/A6X1W1 denotes has
T232 1332-1335 http://www.uniprot.org/uniprot/P94346 denotes has
T233 1332-1335 http://www.uniprot.org/uniprot/A9MAG4 denotes has
T234 1332-1335 http://www.uniprot.org/uniprot/C4L5D6 denotes has
T235 1332-1335 http://web.expasy.org/cellosaurus/CVCL_E689 denotes has
T236 1332-1335 http://www.uniprot.org/uniprot/Q1RJX8 denotes has
T237 1332-1335 http://www.uniprot.org/uniprot/A5VF68 denotes has
T238 1332-1335 http://www.uniprot.org/uniprot/B9EB26 denotes has
T239 1332-1335 http://www.uniprot.org/uniprot/B7JK34 denotes has
T240 1332-1335 http://www.uniprot.org/uniprot/A1B8C2 denotes has
T241 1332-1335 http://www.uniprot.org/uniprot/Q5PBP7 denotes has
T242 1332-1335 http://www.uniprot.org/uniprot/Q1GGZ8 denotes has
T243 1332-1335 http://www.uniprot.org/uniprot/Q71XV6 denotes has
T244 1332-1335 http://www.uniprot.org/uniprot/P12946 denotes has
T245 1332-1335 http://www.uniprot.org/uniprot/B9IW25 denotes has
T246 1332-1335 http://www.uniprot.org/uniprot/Q4FLV1 denotes has
T247 1332-1335 http://www.uniprot.org/uniprot/Q6HEL8 denotes has
T248 1332-1335 http://www.uniprot.org/uniprot/C3LI12 denotes has
T249 1332-1335 http://www.uniprot.org/uniprot/A5IS02 denotes has
T250 1332-1335 http://www.uniprot.org/uniprot/Q82X64 denotes has
T251 1332-1335 http://www.uniprot.org/uniprot/Q67L43 denotes has
T252 1332-1335 http://www.uniprot.org/uniprot/A5FA69 denotes has
T253 1332-1335 http://www.uniprot.org/uniprot/Q9ZDR8 denotes has
T254 1332-1335 http://www.uniprot.org/uniprot/Q6N660 denotes has
T255 1332-1335 http://www.uniprot.org/uniprot/A5VPX0 denotes has
T256 1332-1335 http://www.uniprot.org/uniprot/B0BWT1 denotes has
T257 1332-1335 http://www.uniprot.org/uniprot/Q07MP8 denotes has
T258 1332-1335 http://www.uniprot.org/uniprot/Q11J69 denotes has
T259 1332-1335 http://www.uniprot.org/uniprot/A8F119 denotes has
T260 1332-1335 http://www.uniprot.org/uniprot/Q6GHX0 denotes has
T261 1332-1335 http://www.uniprot.org/uniprot/Q1GWK6 denotes has
T262 1332-1335 http://www.uniprot.org/uniprot/A7HXA1 denotes has
T263 1332-1335 http://www.uniprot.org/uniprot/Q5LRS1 denotes has
T264 1332-1335 http://www.uniprot.org/uniprot/A7Z4B0 denotes has
T265 1332-1335 http://www.uniprot.org/uniprot/Q3SSR2 denotes has
T266 1332-1335 http://www.uniprot.org/uniprot/Q6G3L5 denotes has
T267 1332-1335 http://www.uniprot.org/uniprot/Q8YGI7 denotes has
T268 1332-1335 http://www.uniprot.org/uniprot/B9KHM9 denotes has
T269 1332-1335 http://www.uniprot.org/uniprot/Q2Y9R4 denotes has
T270 1332-1335 http://www.uniprot.org/uniprot/B0T0S6 denotes has
T271 1332-1335 http://www.uniprot.org/uniprot/Q6G011 denotes has
T272 1332-1335 http://www.uniprot.org/uniprot/B2IH44 denotes has
T273 1332-1335 http://www.uniprot.org/uniprot/A6U0T3 denotes has
T274 1332-1335 http://www.uniprot.org/uniprot/Q2YNB0 denotes has
T275 1332-1335 http://www.uniprot.org/uniprot/B7H6T3 denotes has
T276 1332-1335 http://www.uniprot.org/uniprot/B1HPV0 denotes has
T277 1332-1335 http://www.uniprot.org/uniprot/Q819N0 denotes has
T278 1332-1335 http://www.uniprot.org/uniprot/Q92QR8 denotes has
T279 1332-1335 http://web.expasy.org/cellosaurus/CVCL_6758 denotes has
T280 1332-1335 http://www.uniprot.org/uniprot/A7GRX4 denotes has
T281 1332-1335 http://purl.obolibrary.org/obo/PR_000008449 denotes has
T282 1332-1335 http://www.uniprot.org/uniprot/B0CLB4 denotes has
T283 1332-1335 http://www.uniprot.org/uniprot/A7ING5 denotes has
T284 1332-1335 http://www.uniprot.org/uniprot/Q5WFD1 denotes has
T285 1332-1335 http://www.uniprot.org/uniprot/Q89KD9 denotes has
T286 1332-1335 http://www.uniprot.org/uniprot/B1ZGD8 denotes has
T287 1332-1335 http://www.uniprot.org/uniprot/A8EY08 denotes has
T288 1332-1335 http://www.uniprot.org/uniprot/Q04443 denotes has
T289 1332-1335 http://www.uniprot.org/uniprot/Q0APH6 denotes has
T290 1332-1335 http://www.uniprot.org/uniprot/A8LK55 denotes has
T291 1332-1335 http://www.uniprot.org/uniprot/B1YIW6 denotes has
T292 1332-1335 http://www.uniprot.org/uniprot/Q92IS7 denotes has
T293 1332-1335 http://www.uniprot.org/uniprot/Q81MT7 denotes has
T294 1332-1335 http://www.uniprot.org/uniprot/Q2FHW5 denotes has
T295 1332-1335 http://www.uniprot.org/uniprot/B8DH71 denotes has
T296 1332-1335 http://www.uniprot.org/uniprot/Q2N6M9 denotes has
T297 1332-1335 http://www.uniprot.org/uniprot/B0UR12 denotes has
T298 1332-1335 http://www.uniprot.org/uniprot/Q2GLK1 denotes has
T299 1332-1335 http://www.uniprot.org/uniprot/Q0BZT0 denotes has
T300 1332-1335 http://www.uniprot.org/uniprot/Q8Y5K2 denotes has
T301 1332-1335 http://www.uniprot.org/uniprot/Q2GHG8 denotes has
T302 1332-1335 http://www.uniprot.org/uniprot/A8Z1Q0 denotes has
T303 1332-1335 http://www.uniprot.org/uniprot/B8ISP2 denotes has
T304 1332-1335 http://www.uniprot.org/uniprot/Q57DW5 denotes has
T305 1332-1335 http://www.uniprot.org/uniprot/Q5HQ52 denotes has
T306 1332-1335 http://www.uniprot.org/uniprot/Q3YRB4 denotes has
T307 1332-1335 http://www.uniprot.org/uniprot/Q4L5C9 denotes has
T308 1332-1335 http://www.uniprot.org/uniprot/B3CRU7 denotes has
T309 1332-1335 http://www.uniprot.org/uniprot/B9JVB6 denotes has
T310 1332-1335 http://www.uniprot.org/uniprot/A9W350 denotes has
T311 1332-1335 http://www.uniprot.org/uniprot/Q7A160 denotes has
T312 1332-1335 http://www.uniprot.org/uniprot/Q5GSI0 denotes has
T313 1332-1335 http://www.uniprot.org/uniprot/A4YVQ0 denotes has
T314 1332-1335 http://www.uniprot.org/uniprot/Q0BQ20 denotes has
T315 1332-1335 http://www.uniprot.org/uniprot/A8FCU5 denotes has
T316 1332-1335 http://www.uniprot.org/uniprot/A9VUA7 denotes has
T317 1332-1335 http://www.uniprot.org/uniprot/A6H039 denotes has
T318 1332-1335 http://www.uniprot.org/uniprot/Q5L115 denotes has
T319 1332-1335 http://www.uniprot.org/uniprot/Q2G350 denotes has
T320 1332-1335 http://www.uniprot.org/uniprot/B8H551 denotes has
T321 1332-1335 http://www.uniprot.org/uniprot/B3PVH0 denotes has
T322 1332-1335 http://www.uniprot.org/uniprot/Q3IXW9 denotes has
T323 1332-1335 http://www.uniprot.org/uniprot/Q2W552 denotes has
T324 1332-1335 http://www.uniprot.org/uniprot/B3CLF8 denotes has
T325 1332-1335 http://www.uniprot.org/uniprot/Q8CPM2 denotes has
T326 1332-1335 http://www.uniprot.org/uniprot/C0R5T8 denotes has
T327 1332-1335 http://www.uniprot.org/uniprot/B7KV80 denotes has
T328 1332-1335 http://www.uniprot.org/uniprot/Q5HAH7 denotes has
T329 1332-1335 http://www.uniprot.org/uniprot/Q2G2C0 denotes has
T330 1332-1335 http://www.uniprot.org/uniprot/Q7A2S8 denotes has
T331 1332-1335 http://www.uniprot.org/uniprot/C3P6V3 denotes has
T332 1332-1335 http://www.uniprot.org/uniprot/A8I7Y5 denotes has
T333 1332-1335 http://www.uniprot.org/uniprot/A3PQK0 denotes has
T334 1332-1335 http://www.uniprot.org/uniprot/B9KW13 denotes has
T335 1332-1335 http://www.uniprot.org/uniprot/Q929V9 denotes has
T336 1332-1335 http://www.uniprot.org/uniprot/A8GMQ9 denotes has
T337 1332-1335 http://www.uniprot.org/uniprot/A9HEV3 denotes has
T338 1332-1335 http://www.uniprot.org/uniprot/A5CF77 denotes has
T339 1332-1335 http://www.uniprot.org/uniprot/A9IVC8 denotes has
T340 1332-1335 http://www.uniprot.org/uniprot/Q5HGW9 denotes has
T341 1332-1335 http://purl.obolibrary.org/obo/PR_Q61647 denotes has
T342 1332-1335 http://www.uniprot.org/uniprot/Q1MIP9 denotes has
T343 1332-1335 http://www.uniprot.org/uniprot/A4WZ55 denotes has
T344 1332-1335 http://www.uniprot.org/uniprot/Q9K9M8 denotes has
T345 1332-1335 http://www.uniprot.org/uniprot/Q65K14 denotes has
T346 1332-1335 http://www.uniprot.org/uniprot/Q49WP0 denotes has
T347 1332-1335 http://www.uniprot.org/uniprot/Q28PL3 denotes has
T348 1332-1335 http://www.uniprot.org/uniprot/A8GRD0 denotes has
T349 1332-1335 http://www.uniprot.org/uniprot/Q8G1D1 denotes has
T350 1332-1335 http://www.uniprot.org/uniprot/A6QFX0 denotes has
T351 1332-1335 http://www.uniprot.org/uniprot/Q2YX60 denotes has
T352 1332-1335 http://www.uniprot.org/uniprot/Q2IWP3 denotes has
T353 1332-1335 http://www.uniprot.org/uniprot/Q214F0 denotes has
T354 1332-1335 http://www.uniprot.org/uniprot/Q982X5 denotes has
T355 1332-1335 http://www.uniprot.org/uniprot/B3QKF4 denotes has
T356 1332-1335 http://www.uniprot.org/uniprot/Q732C1 denotes has
T357 1332-1335 http://purl.obolibrary.org/obo/CHEBI_73878 denotes has
T358 1332-1335 http://www.uniprot.org/uniprot/Q6GA99 denotes has
T359 1332-1335 http://www.uniprot.org/uniprot/Q4UKQ2 denotes has
T360 1332-1335 http://www.uniprot.org/uniprot/A8GXM1 denotes has
T361 1332-1335 http://www.uniprot.org/uniprot/B5ZXY9 denotes has
T362 1332-1335 http://www.uniprot.org/uniprot/Q136Q9 denotes has
T363 1332-1335 http://www.uniprot.org/uniprot/A6U7T3 denotes has
T364 1332-1335 http://www.uniprot.org/uniprot/Q9A8H9 denotes has
T365 1332-1335 http://www.uniprot.org/uniprot/Q7A665 denotes has
T366 1332-1335 http://www.uniprot.org/uniprot/C3PMV5 denotes has
T367 1332-1335 http://www.uniprot.org/uniprot/C1KX11 denotes has
T368 1332-1335 http://www.uniprot.org/uniprot/Q1QKJ7 denotes has
T369 1370-1373 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T370 1370-1373 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T371 1401-1404 http://purl.obolibrary.org/obo/SO_0001180 denotes are
T372 1401-1404 http://purl.obolibrary.org/obo/SO_0001853 denotes are
T373 1405-1415 http://purl.obolibrary.org/obo/SO_0000857 denotes homologous
T374 1424-1429 http://www.ncbi.nlm.nih.gov/taxonomy/32644 denotes other
T375 1444-1455 http://purl.obolibrary.org/obo/SO_1000035 denotes duplication
T376 1465-1473 http://purl.obolibrary.org/obo/GO_0000219 denotes V-ATPase
T377 1465-1473 http://purl.obolibrary.org/obo/GO_0008245 denotes V-ATPase
T378 1467-1473 http://www.uniprot.org/uniprot/A3DIJ8 denotes ATPase
T379 1467-1473 ATP denotes ATPase
T380 1467-1473 http://www.uniprot.org/uniprot/Q9SIY3 denotes ATPase
T381 1467-1473 http://id.nlm.nih.gov/mesh/D000251 denotes ATPase
T382 1476-1487 http://purl.obolibrary.org/obo/SO_0000991 denotes genomic DNA
T383 1484-1487 http://id.nlm.nih.gov/mesh/D004247 denotes DNA
T384 1484-1487 http://purl.obolibrary.org/obo/SO_0000352 denotes DNA
T385 1484-1487 http://purl.obolibrary.org/obo/GO_0005574 denotes DNA
T386 1484-1487 http://purl.obolibrary.org/obo/CHEBI_16991 denotes DNA
T387 1504-1508 http://purl.obolibrary.org/obo/PR_000024065 denotes this
T388 1504-1508 http://purl.obolibrary.org/obo/PR_O32583 denotes this
T389 1549-1562 ANT denotes mitochondrial
T390 1549-1562 RF1 denotes mitochondrial
T391 1549-1562 FDH denotes mitochondrial
T392 1549-1562 SDH1 denotes mitochondrial
T393 1549-1571 http://purl.obolibrary.org/obo/SO_0000737 denotes mitochondrial sequence
T394 1563-1571 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T395 1572-1575 http://purl.obolibrary.org/obo/PR_000017371 denotes was
T396 1572-1575 http://purl.obolibrary.org/obo/PR_P42768 denotes was
T397 1572-1575 http://purl.obolibrary.org/obo/PR_P70315 denotes was
T398 1572-1575 http://id.nlm.nih.gov/mesh/D014923 denotes was
T399 1593-1602 http://purl.obolibrary.org/obo/SO_0000077 denotes antisense
T400 1624-1627 http://purl.obolibrary.org/obo/SO_0002045 denotes pre
T401 1624-1627 http://purl.obolibrary.org/obo/PR_Q8LLD0 denotes pre
T402 1624-1627 http://purl.obolibrary.org/obo/GO_0003904 denotes pre
T403 1624-1627 http://purl.obolibrary.org/obo/UBERON_0001782 denotes pre
T404 1637-1645 http://purl.obolibrary.org/obo/GO_0000219 denotes V-ATPase
T405 1637-1645 http://purl.obolibrary.org/obo/GO_0008245 denotes V-ATPase
T406 1639-1645 http://www.uniprot.org/uniprot/A3DIJ8 denotes ATPase
T407 1639-1645 ATP denotes ATPase
T408 1639-1645 http://www.uniprot.org/uniprot/Q9SIY3 denotes ATPase
T409 1639-1645 http://id.nlm.nih.gov/mesh/D000251 denotes ATPase
T410 1648-1658 http://purl.obolibrary.org/obo/SO_0000336 denotes pseudogene
T411 1664-1667 http://purl.obolibrary.org/obo/PR_P61517 denotes can
T412 1664-1667 http://purl.obolibrary.org/obo/CHEBI_29320 denotes can
T413 1664-1667 http://purl.obolibrary.org/obo/CHEBI_91238 denotes can
T414 1664-1667 http://purl.obolibrary.org/obo/PR_000034449 denotes can
T415 1664-1667 http://purl.obolibrary.org/obo/PR_F4IZC5 denotes can
T416 1664-1667 http://id.nlm.nih.gov/mesh/C567382 denotes can
T417 1664-1667 http://purl.obolibrary.org/obo/PR_000011515 denotes can
T418 1664-1667 http://purl.obolibrary.org/obo/PR_P35658 denotes can
T419 1683-1686 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T420 1683-1686 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T421 1696-1700 http://purl.obolibrary.org/obo/PR_000024065 denotes This
T422 1696-1700 http://purl.obolibrary.org/obo/PR_O32583 denotes This
T423 1714-1718 http://purl.obolibrary.org/obo/PR_000034142 denotes case
T424 1714-1718 http://purl.obolibrary.org/obo/PR_Q46897 denotes case
T425 1735-1739 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T426 1754-1767 http://purl.obolibrary.org/obo/GO_0005739 denotes mitochondrion
T427 1775-1782 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus
T428 1775-1782 http://purl.obolibrary.org/obo/CHEBI_33252 denotes nucleus
T429 1775-1782 http://purl.obolibrary.org/obo/UBERON_0000125 denotes nucleus

OryzaGP_2022

Id Subject Object Predicate Lexical cue
T1 58-64 http://identifiers.org/oryzabase.gene/24116 denotes ATPase
T2 58-64 http://identifiers.org/oryzabase.gene/22722 denotes ATPase
T3 58-64 http://identifiers.org/oryzabase.gene/21870 denotes ATPase
T4 907-937 http://identifiers.org/oryzabase.gene/13610 denotes vacuolar H(+)-ATPase B subunit
T5 941-947 http://identifiers.org/oryzabase.gene/24116 denotes ATPase
T6 941-947 http://identifiers.org/oryzabase.gene/22722 denotes ATPase
T7 941-947 http://identifiers.org/oryzabase.gene/21870 denotes ATPase
T8 985-991 http://identifiers.org/oryzabase.gene/24116 denotes ATPase
T9 985-991 http://identifiers.org/oryzabase.gene/22722 denotes ATPase
T10 985-991 http://identifiers.org/oryzabase.gene/21870 denotes ATPase
T11 1318-1324 http://identifiers.org/oryzabase.gene/24116 denotes ATPase
T12 1318-1324 http://identifiers.org/oryzabase.gene/22722 denotes ATPase
T13 1318-1324 http://identifiers.org/oryzabase.gene/21870 denotes ATPase
T14 1467-1473 http://identifiers.org/oryzabase.gene/24116 denotes ATPase
T15 1467-1473 http://identifiers.org/oryzabase.gene/22722 denotes ATPase
T16 1467-1473 http://identifiers.org/oryzabase.gene/21870 denotes ATPase
T17 1639-1645 http://identifiers.org/oryzabase.gene/24116 denotes ATPase
T18 1639-1645 http://identifiers.org/oryzabase.gene/22722 denotes ATPase
T19 1639-1645 http://identifiers.org/oryzabase.gene/21870 denotes ATPase

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 332-337 http://identifiers.org/oryzabase.gene/18076 denotes rps19
T2 332-337 http://identifiers.org/oryzabase.gene/15774 denotes rps19
T3 332-337 http://identifiers.org/oryzabase.gene/14889 denotes rps19
T4 332-337 http://identifiers.org/oryzabase.gene/14869 denotes rps19
T5 332-337 http://identifiers.org/oryzabase.gene/14129 denotes rps19
T6 377-381 http://identifiers.org/oryzabase.gene/14115 denotes rps3
T7 377-381 http://identifiers.org/oryzabase.gene/14028 denotes rps3

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 1637-1658 hunflair:NA:Gene denotes V-ATPase B pseudogene
M_1 56-66 hunflair:NA:Gene denotes V-ATPase B
M_2 939-949 hunflair:NA:Gene denotes V-ATPase B
M_3 983-993 hunflair:NA:Gene denotes V-ATPase B
M_4 1316-1326 hunflair:NA:Gene denotes V-ATPase B
M_5 1465-1475 hunflair:NA:Gene denotes V-ATPase B
M_6 1637-1647 hunflair:NA:Gene denotes V-ATPase B
M_7 377-386 hunflair:NA:Gene denotes rps3 gene
M_8 196-200 hunflair:NA:Species denotes rice
M_9 332-342 hunflair:NA:Gene denotes rps19 gene
M_10 56-71 hunflair:NA:Gene denotes V-ATPase B gene
M_11 1316-1331 hunflair:NA:Gene denotes V-ATPase B gene

OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 56-66 http://identifiers.org/oryzabase.gene/13610 denotes V-ATPase B
T2 151-164 http://identifiers.org/oryzabase.gene/885 denotes mitochondrial
T3 151-164 http://identifiers.org/oryzabase.gene/8747 denotes mitochondrial
T4 151-164 http://identifiers.org/oryzabase.gene/8315 denotes mitochondrial
T5 151-164 http://identifiers.org/oryzabase.gene/485 denotes mitochondrial
T6 273-286 http://identifiers.org/oryzabase.gene/885 denotes mitochondrial
T7 273-286 http://identifiers.org/oryzabase.gene/8747 denotes mitochondrial
T8 273-286 http://identifiers.org/oryzabase.gene/8315 denotes mitochondrial
T9 273-286 http://identifiers.org/oryzabase.gene/485 denotes mitochondrial
T10 332-337 http://identifiers.org/oryzabase.gene/18076 denotes rps19
T11 332-337 http://identifiers.org/oryzabase.gene/17697 denotes rps19
T12 332-337 http://identifiers.org/oryzabase.gene/15774 denotes rps19
T13 332-337 http://identifiers.org/oryzabase.gene/14889 denotes rps19
T14 332-337 http://identifiers.org/oryzabase.gene/14869 denotes rps19
T15 332-337 http://identifiers.org/oryzabase.gene/14129 denotes rps19
T16 377-381 http://identifiers.org/oryzabase.gene/14115 denotes rps3
T17 377-381 http://identifiers.org/oryzabase.gene/14028 denotes rps3
T18 392-405 http://identifiers.org/oryzabase.gene/885 denotes mitochondrial
T19 392-405 http://identifiers.org/oryzabase.gene/8747 denotes mitochondrial
T20 392-405 http://identifiers.org/oryzabase.gene/8315 denotes mitochondrial
T21 392-405 http://identifiers.org/oryzabase.gene/485 denotes mitochondrial
T22 509-522 http://identifiers.org/oryzabase.gene/885 denotes mitochondrial
T23 509-522 http://identifiers.org/oryzabase.gene/8747 denotes mitochondrial
T24 509-522 http://identifiers.org/oryzabase.gene/8315 denotes mitochondrial
T25 509-522 http://identifiers.org/oryzabase.gene/485 denotes mitochondrial
T26 907-937 http://identifiers.org/oryzabase.gene/13610 denotes vacuolar H(+)-ATPase B subunit
T27 939-949 http://identifiers.org/oryzabase.gene/13610 denotes V-ATPase B
T28 983-993 http://identifiers.org/oryzabase.gene/13610 denotes V-ATPase B
T29 1316-1326 http://identifiers.org/oryzabase.gene/13610 denotes V-ATPase B
T30 1465-1475 http://identifiers.org/oryzabase.gene/13610 denotes V-ATPase B
T31 1549-1562 http://identifiers.org/oryzabase.gene/885 denotes mitochondrial
T32 1549-1562 http://identifiers.org/oryzabase.gene/8747 denotes mitochondrial
T33 1549-1562 http://identifiers.org/oryzabase.gene/8315 denotes mitochondrial
T34 1549-1562 http://identifiers.org/oryzabase.gene/485 denotes mitochondrial
T35 1637-1658 http://identifiers.org/oryzabase.gene/14510 denotes V-ATPase B pseudogene
T72359 0-13 http://identifiers.org/ricegap/LOC_Os10g35440 denotes Mitochondrial
T14356 0-13 http://identifiers.org/ricegap/LOC_Os07g04240 denotes Mitochondrial
T42458 0-13 http://identifiers.org/ricegap/LOC_Os06g29180 denotes Mitochondrial
T84822 0-13 http://identifiers.org/ricegap/LOC_Os02g48720 denotes Mitochondrial
T10827 56-66 http://identifiers.org/ricegap/LOC_Os06g37180 denotes V-ATPase B
T63818 151-164 http://identifiers.org/ricegap/LOC_Os10g35440 denotes mitochondrial
T43683 151-164 http://identifiers.org/ricegap/LOC_Os07g04240 denotes mitochondrial
T56998 151-164 http://identifiers.org/ricegap/LOC_Os06g29180 denotes mitochondrial
T83480 151-164 http://identifiers.org/ricegap/LOC_Os02g48720 denotes mitochondrial
T31819 273-286 http://identifiers.org/ricegap/LOC_Os10g35440 denotes mitochondrial
T55081 273-286 http://identifiers.org/ricegap/LOC_Os07g04240 denotes mitochondrial
T4120 273-286 http://identifiers.org/ricegap/LOC_Os06g29180 denotes mitochondrial
T36673 273-286 http://identifiers.org/ricegap/LOC_Os02g48720 denotes mitochondrial
T71197 332-337 http://identifiers.org/ricegap/LOC_Os03g31090 denotes rps19
T46900 392-405 http://identifiers.org/ricegap/LOC_Os10g35440 denotes mitochondrial
T73326 392-405 http://identifiers.org/ricegap/LOC_Os07g04240 denotes mitochondrial
T68575 392-405 http://identifiers.org/ricegap/LOC_Os06g29180 denotes mitochondrial
T42514 392-405 http://identifiers.org/ricegap/LOC_Os02g48720 denotes mitochondrial
T51579 509-522 http://identifiers.org/ricegap/LOC_Os10g35440 denotes mitochondrial
T19413 509-522 http://identifiers.org/ricegap/LOC_Os07g04240 denotes mitochondrial
T78597 509-522 http://identifiers.org/ricegap/LOC_Os06g29180 denotes mitochondrial
T94721 509-522 http://identifiers.org/ricegap/LOC_Os02g48720 denotes mitochondrial
T9734 907-937 http://identifiers.org/ricegap/LOC_Os06g37180 denotes vacuolar H(+)-ATPase B subunit
T69545 939-949 http://identifiers.org/ricegap/LOC_Os06g37180 denotes V-ATPase B
T31459 983-993 http://identifiers.org/ricegap/LOC_Os06g37180 denotes V-ATPase B
T9685 1316-1326 http://identifiers.org/ricegap/LOC_Os06g37180 denotes V-ATPase B
T12898 1465-1475 http://identifiers.org/ricegap/LOC_Os06g37180 denotes V-ATPase B
T10322 1549-1562 http://identifiers.org/ricegap/LOC_Os10g35440 denotes mitochondrial
T60878 1549-1562 http://identifiers.org/ricegap/LOC_Os07g04240 denotes mitochondrial
T59199 1549-1562 http://identifiers.org/ricegap/LOC_Os06g29180 denotes mitochondrial
T11316 1549-1562 http://identifiers.org/ricegap/LOC_Os02g48720 denotes mitochondrial
T36752 1637-1647 http://identifiers.org/ricegap/LOC_Os06g37180 denotes V-ATPase B
T62582 0-13 http://identifiers.org/rapdb.locus/Os10g0497432 denotes Mitochondrial
T15220 0-13 http://identifiers.org/rapdb.locus/Os07g0134800 denotes Mitochondrial
T26246 0-13 http://identifiers.org/rapdb.locus/Os06g0486800 denotes Mitochondrial
T53924 0-13 http://identifiers.org/rapdb.locus/Os02g0718900 denotes Mitochondrial
T90801 56-66 http://identifiers.org/rapdb.locus/Os06g0568200 denotes V-ATPase B
T27868 151-164 http://identifiers.org/rapdb.locus/Os10g0497432 denotes mitochondrial
T40619 151-164 http://identifiers.org/rapdb.locus/Os07g0134800 denotes mitochondrial
T64157 151-164 http://identifiers.org/rapdb.locus/Os06g0486800 denotes mitochondrial
T46529 151-164 http://identifiers.org/rapdb.locus/Os02g0718900 denotes mitochondrial
T84695 273-286 http://identifiers.org/rapdb.locus/Os10g0497432 denotes mitochondrial
T29515 273-286 http://identifiers.org/rapdb.locus/Os07g0134800 denotes mitochondrial
T79180 273-286 http://identifiers.org/rapdb.locus/Os06g0486800 denotes mitochondrial
T64574 273-286 http://identifiers.org/rapdb.locus/Os02g0718900 denotes mitochondrial
T79738 332-337 http://identifiers.org/rapdb.locus/Os03g0424500 denotes rps19
T58969 392-405 http://identifiers.org/rapdb.locus/Os10g0497432 denotes mitochondrial
T21977 392-405 http://identifiers.org/rapdb.locus/Os07g0134800 denotes mitochondrial
T93302 392-405 http://identifiers.org/rapdb.locus/Os06g0486800 denotes mitochondrial
T97436 392-405 http://identifiers.org/rapdb.locus/Os02g0718900 denotes mitochondrial
T78463 509-522 http://identifiers.org/rapdb.locus/Os10g0497432 denotes mitochondrial
T21033 509-522 http://identifiers.org/rapdb.locus/Os07g0134800 denotes mitochondrial
T58588 509-522 http://identifiers.org/rapdb.locus/Os06g0486800 denotes mitochondrial
T98500 509-522 http://identifiers.org/rapdb.locus/Os02g0718900 denotes mitochondrial
T6591 907-937 http://identifiers.org/rapdb.locus/Os06g0568200 denotes vacuolar H(+)-ATPase B subunit
T82117 939-949 http://identifiers.org/rapdb.locus/Os06g0568200 denotes V-ATPase B
T23867 983-993 http://identifiers.org/rapdb.locus/Os06g0568200 denotes V-ATPase B
T90994 1316-1326 http://identifiers.org/rapdb.locus/Os06g0568200 denotes V-ATPase B
T16195 1465-1475 http://identifiers.org/rapdb.locus/Os06g0568200 denotes V-ATPase B
T19260 1549-1562 http://identifiers.org/rapdb.locus/Os10g0497432 denotes mitochondrial
T9292 1549-1562 http://identifiers.org/rapdb.locus/Os07g0134800 denotes mitochondrial
T95843 1549-1562 http://identifiers.org/rapdb.locus/Os06g0486800 denotes mitochondrial
T83321 1549-1562 http://identifiers.org/rapdb.locus/Os02g0718900 denotes mitochondrial
T32518 1637-1647 http://identifiers.org/rapdb.locus/Os06g0568200 denotes V-ATPase B
T37316 56-66 http://identifiers.org/uniprot/Q7FV25 denotes V-ATPase B
T89143 151-164 http://identifiers.org/uniprot/Q6ZDY8 denotes mitochondrial
T27168 151-164 http://identifiers.org/uniprot/Q2PPE8 denotes mitochondrial
T82353 151-164 http://identifiers.org/uniprot/B6TRR5 denotes mitochondrial
T44610 151-164 http://identifiers.org/refseq/NP_001105434.1 denotes mitochondrial
T45308 273-286 http://identifiers.org/uniprot/Q6ZDY8 denotes mitochondrial
T73363 273-286 http://identifiers.org/uniprot/Q2PPE8 denotes mitochondrial
T75770 273-286 http://identifiers.org/uniprot/B6TRR5 denotes mitochondrial
T17289 273-286 http://identifiers.org/refseq/NP_001105434.1 denotes mitochondrial
T36561 392-405 http://identifiers.org/uniprot/Q6ZDY8 denotes mitochondrial
T38145 392-405 http://identifiers.org/uniprot/Q2PPE8 denotes mitochondrial
T61740 392-405 http://identifiers.org/uniprot/B6TRR5 denotes mitochondrial
T5775 392-405 http://identifiers.org/refseq/NP_001105434.1 denotes mitochondrial
T95817 509-522 http://identifiers.org/uniprot/Q6ZDY8 denotes mitochondrial
T74135 509-522 http://identifiers.org/uniprot/Q2PPE8 denotes mitochondrial
T74243 509-522 http://identifiers.org/uniprot/B6TRR5 denotes mitochondrial
T58944 509-522 http://identifiers.org/refseq/NP_001105434.1 denotes mitochondrial
T56837 907-937 http://identifiers.org/uniprot/Q7FV25 denotes vacuolar H(+)-ATPase B subunit
T85048 939-949 http://identifiers.org/uniprot/Q7FV25 denotes V-ATPase B
T96028 983-993 http://identifiers.org/uniprot/Q7FV25 denotes V-ATPase B
T7675 1316-1326 http://identifiers.org/uniprot/Q7FV25 denotes V-ATPase B
T90946 1465-1475 http://identifiers.org/uniprot/Q7FV25 denotes V-ATPase B
T7918 1549-1562 http://identifiers.org/uniprot/Q6ZDY8 denotes mitochondrial
T21624 1549-1562 http://identifiers.org/uniprot/Q2PPE8 denotes mitochondrial
T53086 1549-1562 http://identifiers.org/uniprot/B6TRR5 denotes mitochondrial
T61734 1549-1562 http://identifiers.org/refseq/NP_001105434.1 denotes mitochondrial
T1560 1637-1647 http://identifiers.org/uniprot/Q7FV25 denotes V-ATPase B
M_0 1637-1658 hunflair:NA:Gene denotes V-ATPase B pseudogene
M_1 56-66 hunflair:NA:Gene denotes V-ATPase B
M_2 939-949 hunflair:NA:Gene denotes V-ATPase B
M_3 983-993 hunflair:NA:Gene denotes V-ATPase B
M_4 1316-1326 hunflair:NA:Gene denotes V-ATPase B
M_5 1465-1475 hunflair:NA:Gene denotes V-ATPase B
M_6 1637-1647 hunflair:NA:Gene denotes V-ATPase B
M_7 377-386 hunflair:NA:Gene denotes rps3 gene
M_8 196-200 hunflair:NA:Species denotes rice
M_9 332-342 hunflair:NA:Gene denotes rps19 gene
M_10 56-71 hunflair:NA:Gene denotes V-ATPase B gene
M_11 1316-1331 hunflair:NA:Gene denotes V-ATPase B gene

OryzaGP

Id Subject Object Predicate Lexical cue
T1 0-13 gene denotes Mitochondrial
T2 58-64 gene denotes ATPase
T3 151-168 gene denotes mitochondrial DNA
T4 921-927 gene denotes ATPase
T5 941-947 gene denotes ATPase
T6 985-991 gene denotes ATPase
T7 1467-1473 gene denotes ATPase
T8 1740-1748 gene denotes transfer

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-106 Sentence denotes Mitochondrial sequence migrated downstream to a nuclear V-ATPase B gene is transcribed but non-functional.
T2 107-201 Sentence denotes A promiscuous nuclear sequence containing a mitochondrial DNA fragment was isolated from rice.
T3 202-387 Sentence denotes Nucleotide sequence analysis reveals that the cDNA clone #21 carries a mitochondrial sequence homologous to the 3' portion of the rps19 gene followed by the 5' portion of the rps3 gene.
T4 388-454 Sentence denotes The mitochondrial sequence is present in an antisense orientation.
T5 455-589 Sentence denotes Sequence comparison of the #21 cDNA with the original mitochondrial sequence shows 99% similarity, suggesting a recent transfer event.
T6 590-819 Sentence denotes Moreover, evidence for a lack of an RNA editing event and retaining of the group II intron sequence strongly suggests that the sequence was transferred from mitochondrion to the nucleus via DNA rather than RNA as an intermediate.
T7 820-956 Sentence denotes The upstream region to the mitochondria-derived sequence shows homology to part of the vacuolar H(+)-ATPase B subunit (V-ATPase B) gene.
T8 957-1140 Sentence denotes Isolation of a functional V-ATPase B cDNA and its comparison with the #21 cDNA reveal a number of nucleotide substitutions resulting in many translational stop codons in the #21 cDNA.
T9 1141-1201 Sentence denotes This indicates that the #21 cDNA sequence is not functional.
T10 1202-1347 Sentence denotes Analysis of genomic sequences shows the presence of five intron sequences in the #21 cDNA, whereas the functional V-ATPase B gene has 14 introns.
T11 1348-1488 Sentence denotes Of these, three exons and their internal two introns are homologous to each other, suggesting a duplication event of V-ATPase B genomic DNA.
T12 1489-1695 Sentence denotes The results of this investigation strongly suggest that the mitochondrial sequence was integrated in an antisense orientation into the pre-existing V-ATPase B pseudogene that can be transcribed and spliced.
T13 1696-1783 Sentence denotes This represents a case of unsuccessful gene transfer from mitochondrion to the nucleus.