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PubMed:11287402 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 85-92 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis X
T2 1018-1025 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis X
T3 1150-1157 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis X
T4 1383-1390 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis X
T5 1519-1526 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis X
T6 1737-1744 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose
T7 1767-1774 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose
T8 1908-1915 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis X
T9 1932-1940 https://glytoucan.org/Structures/Glycans/G00057MO denotes LacdiNAc
T10 1932-1940 https://glytoucan.org/Structures/Glycans/G31736BK denotes LacdiNAc

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 85-92 Glycan_Motif denotes Lewis X https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO
T3 1018-1025 Glycan_Motif denotes Lewis X https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO
T5 1150-1157 Glycan_Motif denotes Lewis X https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO
T7 1383-1390 Glycan_Motif denotes Lewis X https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO
T9 1519-1526 Glycan_Motif denotes Lewis X https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO
T11 1737-1744 Glycan_Motif denotes mannose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ
T12 1767-1774 Glycan_Motif denotes mannose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ
T13 1908-1915 Glycan_Motif denotes Lewis X https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO
T15 1932-1940 Glycan_Motif denotes LacdiNAc https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G31736BK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00057MO

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T1 85-92 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis X
T2 1018-1025 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis X
T3 1150-1157 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis X
T4 1383-1390 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis X
T5 1519-1526 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis X
T6 1908-1915 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis X

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 129-132 http://purl.obolibrary.org/obo/MAT_0000213 denotes egg
T2 438-442 http://purl.obolibrary.org/obo/MAT_0000213 denotes eggs

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-115 Sentence denotes Characteristic structural features of schistosome cercarial N-glycans: expression of Lewis X and core xylosylation.
TextSentencer_T2 116-322 Sentence denotes Schistosomal egg N-glycans are the only examples in nature that have been structurally shown to contain beta2-xylosylation, alpha6-fucosylation, and alpha3-fucosylation on the N,N'-diacetyl chitobiose core.
TextSentencer_T3 323-566 Sentence denotes We present evidence that core difucosylated and xylosylated N-glycans are characteristics of Schistosoma japonicum eggs but not of the cercariae and adults, for which neither core xylosylation nor alpha3-fucosylation could be readily detected.
TextSentencer_T4 567-683 Sentence denotes In contrast, a majority of the N-glycans from Schistosoma mansoni cercariae but not the adults are core xylosylated.
TextSentencer_T5 684-953 Sentence denotes Tandem mass spectrometry analysis coupled with chromatographic mapping, sequential exoglycosidase digestion, and methylation analysis were employed to unambiguously define the structures of core beta2-xylosylated, alpha6-fucosylated N-glycans from S. mansoni cercariae.
TextSentencer_T6 954-1145 Sentence denotes Unexpectedly, a majority of these N-glycans were found to carry Lewis X determinant, Galbeta1-->4(Fucalpha1-->3)GlcNAcbeta1-->, on the nonreducing termini of mono- and biantennary structures.
TextSentencer_T7 1146-1300 Sentence denotes The Lewis X-containing glycoproteins were found to be distinct from those carrying the complex, multifucosylated glycocalyx O-glycans reported previously.
TextSentencer_T8 1301-1433 Sentence denotes The corresponding N-glycans from S. japonicum cercariae are likewise dominated by Lewis X termini but without the core xylosylation.
TextSentencer_T9 1434-1605 Sentence denotes We concluded that the invading cercariae present an important and abundant source of Lewis X antigens, which may contribute to the induced humoral response upon infection.
TextSentencer_T10 1606-1829 Sentence denotes Following transformation and development into the adults, the N-glycans synthesized comprise a significantly larger amount of high mannose and fucosylated pauci-mannose structures in comparison with the cercarial N-glycans.
TextSentencer_T11 1830-2044 Sentence denotes A portion of the mono- and biantennary complex types were identified to carry Lewis X and fucosylated LacdiNAc termini, which could also be detected by mass spectrometry analysis on larger, complex-type structures.
T1 0-115 Sentence denotes Characteristic structural features of schistosome cercarial N-glycans: expression of Lewis X and core xylosylation.
T2 116-322 Sentence denotes Schistosomal egg N-glycans are the only examples in nature that have been structurally shown to contain beta2-xylosylation, alpha6-fucosylation, and alpha3-fucosylation on the N,N'-diacetyl chitobiose core.
T3 323-566 Sentence denotes We present evidence that core difucosylated and xylosylated N-glycans are characteristics of Schistosoma japonicum eggs but not of the cercariae and adults, for which neither core xylosylation nor alpha3-fucosylation could be readily detected.
T4 567-683 Sentence denotes In contrast, a majority of the N-glycans from Schistosoma mansoni cercariae but not the adults are core xylosylated.
T5 684-953 Sentence denotes Tandem mass spectrometry analysis coupled with chromatographic mapping, sequential exoglycosidase digestion, and methylation analysis were employed to unambiguously define the structures of core beta2-xylosylated, alpha6-fucosylated N-glycans from S. mansoni cercariae.
T6 954-1145 Sentence denotes Unexpectedly, a majority of these N-glycans were found to carry Lewis X determinant, Galbeta1-->4(Fucalpha1-->3)GlcNAcbeta1-->, on the nonreducing termini of mono- and biantennary structures.
T7 1146-1300 Sentence denotes The Lewis X-containing glycoproteins were found to be distinct from those carrying the complex, multifucosylated glycocalyx O-glycans reported previously.
T8 1301-1433 Sentence denotes The corresponding N-glycans from S. japonicum cercariae are likewise dominated by Lewis X termini but without the core xylosylation.
T9 1434-1605 Sentence denotes We concluded that the invading cercariae present an important and abundant source of Lewis X antigens, which may contribute to the induced humoral response upon infection.
T10 1606-1829 Sentence denotes Following transformation and development into the adults, the N-glycans synthesized comprise a significantly larger amount of high mannose and fucosylated pauci-mannose structures in comparison with the cercarial N-glycans.
T11 1830-2044 Sentence denotes A portion of the mono- and biantennary complex types were identified to carry Lewis X and fucosylated LacdiNAc termini, which could also be detected by mass spectrometry analysis on larger, complex-type structures.
T1 0-115 Sentence denotes Characteristic structural features of schistosome cercarial N-glycans: expression of Lewis X and core xylosylation.
T2 116-322 Sentence denotes Schistosomal egg N-glycans are the only examples in nature that have been structurally shown to contain beta2-xylosylation, alpha6-fucosylation, and alpha3-fucosylation on the N,N'-diacetyl chitobiose core.
T3 323-566 Sentence denotes We present evidence that core difucosylated and xylosylated N-glycans are characteristics of Schistosoma japonicum eggs but not of the cercariae and adults, for which neither core xylosylation nor alpha3-fucosylation could be readily detected.
T4 567-683 Sentence denotes In contrast, a majority of the N-glycans from Schistosoma mansoni cercariae but not the adults are core xylosylated.
T5 684-953 Sentence denotes Tandem mass spectrometry analysis coupled with chromatographic mapping, sequential exoglycosidase digestion, and methylation analysis were employed to unambiguously define the structures of core beta2-xylosylated, alpha6-fucosylated N-glycans from S. mansoni cercariae.
T6 954-1145 Sentence denotes Unexpectedly, a majority of these N-glycans were found to carry Lewis X determinant, Galbeta1-->4(Fucalpha1-->3)GlcNAcbeta1-->, on the nonreducing termini of mono- and biantennary structures.
T7 1146-1300 Sentence denotes The Lewis X-containing glycoproteins were found to be distinct from those carrying the complex, multifucosylated glycocalyx O-glycans reported previously.
T8 1301-1433 Sentence denotes The corresponding N-glycans from S. japonicum cercariae are likewise dominated by Lewis X termini but without the core xylosylation.
T9 1434-1605 Sentence denotes We concluded that the invading cercariae present an important and abundant source of Lewis X antigens, which may contribute to the induced humoral response upon infection.
T10 1606-1829 Sentence denotes Following transformation and development into the adults, the N-glycans synthesized comprise a significantly larger amount of high mannose and fucosylated pauci-mannose structures in comparison with the cercarial N-glycans.
T11 1830-2044 Sentence denotes A portion of the mono- and biantennary complex types were identified to carry Lewis X and fucosylated LacdiNAc termini, which could also be detected by mass spectrometry analysis on larger, complex-type structures.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 85-92 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis X
T2 1018-1025 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis X
T3 1150-1157 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis X
T4 1383-1390 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis X
T5 1519-1526 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis X
T6 1737-1744 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose
T7 1767-1774 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose
T8 1908-1915 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis X
T9 1932-1940 https://glytoucan.org/Structures/Glycans/G00057MO denotes LacdiNAc
T10 1932-1940 https://glytoucan.org/Structures/Glycans/G31736BK denotes LacdiNAc

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 747-754 FMAID:90078 denotes mapping
_T2 1169-1182 FMAID:167256 denotes glycoproteins
_T3 1169-1182 FMAID:62925 denotes glycoproteins
_T4 1259-1269 FMAID:164994 denotes glycocalyx
_T5 1737-1744 FMAID:196796 denotes mannose
_T6 1737-1744 FMAID:82801 denotes mannose
_T7 1767-1774 FMAID:82801 denotes mannose
_T8 1767-1774 FMAID:196796 denotes mannose

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 220-225 http://www.uniprot.org/uniprot/Q60867 denotes beta2
T2 879-884 http://www.uniprot.org/uniprot/Q60867 denotes beta2

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 38-49 http://purl.bioontology.org/ontology/NCBITAXON/6181 denotes schistosome
T2 38-49 http://purl.bioontology.org/ontology/NCBITAXON/38740 denotes schistosome
T3 116-128 http://purl.bioontology.org/ontology/NCBITAXON/6181 denotes Schistosomal
T4 116-128 http://purl.bioontology.org/ontology/NCBITAXON/38740 denotes Schistosomal
T5 416-427 http://purl.bioontology.org/ontology/NCBITAXON/31245 denotes Schistosoma
T6 416-427 http://purl.bioontology.org/ontology/NCBITAXON/6181 denotes Schistosoma
T7 416-427 http://purl.bioontology.org/ontology/NCBITAXON/192617 denotes Schistosoma
T8 416-437 http://purl.bioontology.org/ontology/NCBITAXON/6182 denotes Schistosoma japonicum
T9 458-467 http://purl.bioontology.org/ontology/NCBITAXON/280692 denotes cercariae
T10 613-624 http://purl.bioontology.org/ontology/NCBITAXON/192617 denotes Schistosoma
T11 613-624 http://purl.bioontology.org/ontology/NCBITAXON/6181 denotes Schistosoma
T12 613-624 http://purl.bioontology.org/ontology/NCBITAXON/31245 denotes Schistosoma
T13 613-632 http://purl.bioontology.org/ontology/NCBITAXON/6183 denotes Schistosoma mansoni
T14 625-632 http://purl.bioontology.org/ontology/NCBITAXON/254792 denotes mansoni
T15 633-642 http://purl.bioontology.org/ontology/NCBITAXON/280692 denotes cercariae
T16 935-942 http://purl.bioontology.org/ontology/NCBITAXON/254792 denotes mansoni
T17 943-952 http://purl.bioontology.org/ontology/NCBITAXON/280692 denotes cercariae
T18 1347-1356 http://purl.bioontology.org/ontology/NCBITAXON/280692 denotes cercariae
T19 1465-1474 http://purl.bioontology.org/ontology/NCBITAXON/280692 denotes cercariae

GO-BP

Id Subject Object Predicate Lexical cue
T1 247-259 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylation
T2 272-284 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylation
T3 527-539 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylation
T4 905-916 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylated
T5 1749-1760 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylated
T6 1920-1931 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylated
T7 782-791 http://purl.obolibrary.org/obo/GO_0007586 denotes digestion
T8 797-808 http://purl.obolibrary.org/obo/GO_0032259 denotes methylation
T9 905-926 http://purl.obolibrary.org/obo/GO_0036071 denotes fucosylated N-glycans
T10 1635-1646 http://purl.obolibrary.org/obo/GO_0032502 denotes development

GO-CC

Id Subject Object Predicate Lexical cue
T1 97-101 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T2 317-321 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T3 348-352 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T4 498-502 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T5 666-670 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T6 874-878 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T7 1415-1419 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T8 516-519 http://purl.obolibrary.org/obo/GO_0005731 denotes nor
T9 1259-1269 http://purl.obolibrary.org/obo/GO_0030112 denotes glycocalyx

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 129-132 http://purl.obolibrary.org/obo/UBERON_0007379 denotes egg
T2 438-442 http://purl.obolibrary.org/obo/UBERON_0007379 denotes eggs
T3 458-467 http://purl.obolibrary.org/obo/UBERON_0018388 denotes cercariae
T4 633-642 http://purl.obolibrary.org/obo/UBERON_0018388 denotes cercariae
T5 943-952 http://purl.obolibrary.org/obo/UBERON_0018388 denotes cercariae
T6 1347-1356 http://purl.obolibrary.org/obo/UBERON_0018388 denotes cercariae
T7 1465-1474 http://purl.obolibrary.org/obo/UBERON_0018388 denotes cercariae

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 691-708 http://edamontology.org/topic_3520 denotes mass spectrometry
T2 691-708 http://edamontology.org/topic_0134 denotes mass spectrometry
T3 747-754 http://edamontology.org/topic_0102 denotes mapping
T4 1527-1535 http://edamontology.org/topic_2830 denotes antigens
T5 1775-1799 http://edamontology.org/topic_1770 denotes structures in comparison
T6 1982-1999 http://edamontology.org/topic_3520 denotes mass spectrometry
T7 1982-1999 http://edamontology.org/topic_0134 denotes mass spectrometry

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 15-25 http://edamontology.org/data_0883 denotes structural
T2 26-34 http://edamontology.org/data_1255 denotes features
T3 190-202 http://edamontology.org/data_0883 denotes structurally
T4 557-565 http://edamontology.org/operation_2423 denotes detected
T5 691-708 http://edamontology.org/data_2536 denotes mass spectrometry
T6 691-708 http://edamontology.org/data_3147 denotes mass spectrometry
T7 691-717 http://edamontology.org/operation_3214 denotes mass spectrometry analysis
T8 709-717 http://edamontology.org/operation_2945 denotes analysis
T9 747-754 http://edamontology.org/data_1274 denotes mapping
T10 747-754 http://edamontology.org/format_3285 denotes mapping
T11 747-754 http://edamontology.org/operation_2429 denotes mapping
T12 797-817 http://edamontology.org/operation_3204 denotes methylation analysis
T13 809-817 http://edamontology.org/operation_2945 denotes analysis
T14 860-870 http://edamontology.org/data_0883 denotes structures
T15 1134-1144 http://edamontology.org/data_0883 denotes structures
T16 1280-1288 http://edamontology.org/data_2048 denotes reported
T17 1775-1785 http://edamontology.org/data_0883 denotes structures
T18 1775-1788 http://edamontology.org/data_1070 denotes structures in
T19 1775-1799 http://edamontology.org/operation_2483 denotes structures in comparison
T20 1789-1799 http://edamontology.org/operation_2424 denotes comparison
T21 1877-1882 http://edamontology.org/data_2100 denotes types
T22 1888-1898 http://edamontology.org/data_0842 denotes identified
T23 1888-1898 http://edamontology.org/data_2611 denotes identified
T24 1970-1978 http://edamontology.org/operation_2423 denotes detected
T25 1982-1999 http://edamontology.org/data_3147 denotes mass spectrometry
T26 1982-1999 http://edamontology.org/data_2536 denotes mass spectrometry
T27 1982-2008 http://edamontology.org/operation_3214 denotes mass spectrometry analysis
T28 2000-2008 http://edamontology.org/operation_2945 denotes analysis
T29 2033-2043 http://edamontology.org/data_0883 denotes structures

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 129-132 http://purl.obolibrary.org/obo/MAT_0000213 denotes egg
T2 438-442 http://purl.obolibrary.org/obo/MAT_0000213 denotes eggs

GlycoBiology-Motifs

Id Subject Object Predicate Lexical cue
T1 60-69 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T2 133-142 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T3 383-392 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T4 598-607 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T5 917-926 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T6 988-997 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T7 1319-1328 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T8 1668-1677 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T9 1819-1828 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T10 85-90 http://rdf.glycoinfo.org/glycan/G00047MO denotes Lewis
T11 1018-1023 http://rdf.glycoinfo.org/glycan/G00047MO denotes Lewis
T12 1150-1155 http://rdf.glycoinfo.org/glycan/G00047MO denotes Lewis
T13 1383-1388 http://rdf.glycoinfo.org/glycan/G00047MO denotes Lewis
T14 1519-1524 http://rdf.glycoinfo.org/glycan/G00047MO denotes Lewis
T15 1908-1913 http://rdf.glycoinfo.org/glycan/G00047MO denotes Lewis
T16 85-92 http://rdf.glycoinfo.org/glycan/G00051MO denotes Lewis X
T17 1018-1025 http://rdf.glycoinfo.org/glycan/G00051MO denotes Lewis X
T18 1150-1157 http://rdf.glycoinfo.org/glycan/G00051MO denotes Lewis X
T19 1383-1390 http://rdf.glycoinfo.org/glycan/G00051MO denotes Lewis X
T20 1519-1526 http://rdf.glycoinfo.org/glycan/G00051MO denotes Lewis X
T21 1908-1915 http://rdf.glycoinfo.org/glycan/G00051MO denotes Lewis X
T22 1732-1744 http://rdf.glycoinfo.org/glycan/G00028MO denotes high mannose
T23 1932-1940 http://rdf.glycoinfo.org/glycan/G00057MO denotes LacdiNAc

GlycoBiology-Epitope

Id Subject Object Predicate Lexical cue
PD-GlycoEpitope-B_T1 85-92 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis X
PD-GlycoEpitope-B_T2 1018-1025 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis X
PD-GlycoEpitope-B_T3 1150-1157 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis X
PD-GlycoEpitope-B_T4 1383-1390 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis X
PD-GlycoEpitope-B_T5 1519-1526 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis X
PD-GlycoEpitope-B_T6 1908-1915 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis X

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 50-59 http://purl.obolibrary.org/obo/UBERON_0018388 denotes cercarial
PD-UBERON-AE-B_T2 458-467 http://purl.obolibrary.org/obo/UBERON_0018388 denotes cercariae
PD-UBERON-AE-B_T3 633-642 http://purl.obolibrary.org/obo/UBERON_0018388 denotes cercariae
PD-UBERON-AE-B_T4 943-952 http://purl.obolibrary.org/obo/UBERON_0018388 denotes cercariae
PD-UBERON-AE-B_T5 1347-1356 http://purl.obolibrary.org/obo/UBERON_0018388 denotes cercariae
PD-UBERON-AE-B_T6 1465-1474 http://purl.obolibrary.org/obo/UBERON_0018388 denotes cercariae
PD-UBERON-AE-B_T7 1809-1818 http://purl.obolibrary.org/obo/UBERON_0018388 denotes cercarial
PD-UBERON-AE-B_T8 129-132 http://purl.obolibrary.org/obo/UBERON_0007379 denotes egg
PD-UBERON-AE-B_T9 438-442 http://purl.obolibrary.org/obo/UBERON_0007379 denotes eggs

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 85-92 Glycan denotes Lewis X https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO
T2 1018-1025 Glycan denotes Lewis X https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO
T3 1150-1157 Glycan denotes Lewis X https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO
T4 1383-1390 Glycan denotes Lewis X https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO
T5 1519-1526 Glycan denotes Lewis X https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO
T6 1908-1915 Glycan denotes Lewis X https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 1595-1604 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 129-132 Body_part denotes egg http://purl.obolibrary.org/obo/MAT_0000213
T2 438-442 Body_part denotes eggs http://purl.obolibrary.org/obo/MAT_0000213

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 85-92 Glycan denotes Lewis X https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO
T2 1018-1025 Glycan denotes Lewis X https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO
T3 1150-1157 Glycan denotes Lewis X https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO
T4 1383-1390 Glycan denotes Lewis X https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO
T5 1519-1526 Glycan denotes Lewis X https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO
T6 1908-1915 Glycan denotes Lewis X https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 129-132 Body_part denotes egg http://purl.obolibrary.org/obo/UBERON_0007379
T2 458-467 Body_part denotes cercariae http://purl.obolibrary.org/obo/UBERON_0018388
T3 633-642 Body_part denotes cercariae http://purl.obolibrary.org/obo/UBERON_0018388
T4 943-952 Body_part denotes cercariae http://purl.obolibrary.org/obo/UBERON_0018388
T5 1347-1356 Body_part denotes cercariae http://purl.obolibrary.org/obo/UBERON_0018388
T6 1465-1474 Body_part denotes cercariae http://purl.obolibrary.org/obo/UBERON_0018388

GlyCosmos15-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 1595-1604 Disease denotes infection MONDO:0005550

GlyCosmos15-Taxon

Id Subject Object Predicate Lexical cue db_id
T1 416-437 Organism denotes Schistosoma japonicum 6182
T2 613-632 Organism denotes Schistosoma mansoni 6183

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-115 Sentence denotes Characteristic structural features of schistosome cercarial N-glycans: expression of Lewis X and core xylosylation.
T2 116-322 Sentence denotes Schistosomal egg N-glycans are the only examples in nature that have been structurally shown to contain beta2-xylosylation, alpha6-fucosylation, and alpha3-fucosylation on the N,N'-diacetyl chitobiose core.
T3 323-566 Sentence denotes We present evidence that core difucosylated and xylosylated N-glycans are characteristics of Schistosoma japonicum eggs but not of the cercariae and adults, for which neither core xylosylation nor alpha3-fucosylation could be readily detected.
T4 567-683 Sentence denotes In contrast, a majority of the N-glycans from Schistosoma mansoni cercariae but not the adults are core xylosylated.
T5 684-953 Sentence denotes Tandem mass spectrometry analysis coupled with chromatographic mapping, sequential exoglycosidase digestion, and methylation analysis were employed to unambiguously define the structures of core beta2-xylosylated, alpha6-fucosylated N-glycans from S. mansoni cercariae.
T6 954-1145 Sentence denotes Unexpectedly, a majority of these N-glycans were found to carry Lewis X determinant, Galbeta1-->4(Fucalpha1-->3)GlcNAcbeta1-->, on the nonreducing termini of mono- and biantennary structures.
T7 1146-1300 Sentence denotes The Lewis X-containing glycoproteins were found to be distinct from those carrying the complex, multifucosylated glycocalyx O-glycans reported previously.
T8 1301-1433 Sentence denotes The corresponding N-glycans from S. japonicum cercariae are likewise dominated by Lewis X termini but without the core xylosylation.
T9 1434-1605 Sentence denotes We concluded that the invading cercariae present an important and abundant source of Lewis X antigens, which may contribute to the induced humoral response upon infection.
T10 1606-1829 Sentence denotes Following transformation and development into the adults, the N-glycans synthesized comprise a significantly larger amount of high mannose and fucosylated pauci-mannose structures in comparison with the cercarial N-glycans.
T11 1830-2044 Sentence denotes A portion of the mono- and biantennary complex types were identified to carry Lewis X and fucosylated LacdiNAc termini, which could also be detected by mass spectrometry analysis on larger, complex-type structures.

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 85-92 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes Lewis X http://www.glycoepitope.jp/epitopes/EP0011
T2 1018-1025 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes Lewis X http://www.glycoepitope.jp/epitopes/EP0011
T3 1150-1157 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes Lewis X http://www.glycoepitope.jp/epitopes/EP0011
T4 1383-1390 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes Lewis X http://www.glycoepitope.jp/epitopes/EP0011
T5 1519-1526 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes Lewis X http://www.glycoepitope.jp/epitopes/EP0011
T6 1908-1915 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes Lewis X http://www.glycoepitope.jp/epitopes/EP0011

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 1259-1269 Body_part denotes glycocalyx FMA:66838

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 129-132 Body_part denotes egg http://purl.obolibrary.org/obo/MAT_0000213
T2 438-442 Body_part denotes eggs http://purl.obolibrary.org/obo/MAT_0000213

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 416-437 OrganismTaxon denotes Schistosoma japonicum 6182
T2 613-632 OrganismTaxon denotes Schistosoma mansoni 6183

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 85-92 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes Lewis X http://www.glycoepitope.jp/epitopes/EP0011
T2 1018-1025 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes Lewis X http://www.glycoepitope.jp/epitopes/EP0011
T3 1150-1157 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes Lewis X http://www.glycoepitope.jp/epitopes/EP0011
T4 1383-1390 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes Lewis X http://www.glycoepitope.jp/epitopes/EP0011
T5 1519-1526 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes Lewis X http://www.glycoepitope.jp/epitopes/EP0011
T6 1908-1915 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes Lewis X http://www.glycoepitope.jp/epitopes/EP0011

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 129-132 Body_part denotes egg http://purl.obolibrary.org/obo/UBERON_0007379
T2 458-467 Body_part denotes cercariae http://purl.obolibrary.org/obo/UBERON_0018388
T3 633-642 Body_part denotes cercariae http://purl.obolibrary.org/obo/UBERON_0018388
T4 943-952 Body_part denotes cercariae http://purl.obolibrary.org/obo/UBERON_0018388
T5 1347-1356 Body_part denotes cercariae http://purl.obolibrary.org/obo/UBERON_0018388
T6 1465-1474 Body_part denotes cercariae http://purl.obolibrary.org/obo/UBERON_0018388