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ggdb-test

Id Subject Object Predicate Lexical cue
T1 10-15 https://acgg.asia/db/ggdb/info/gg201 denotes ALG11
T2 614-619 https://acgg.asia/db/ggdb/info/gg201 denotes ALG11
T3 1308-1313 https://acgg.asia/db/ggdb/info/gg201 denotes ALG11
T4 1429-1434 https://acgg.asia/db/ggdb/info/gg201 denotes Alg11
T5 1543-1548 https://acgg.asia/db/ggdb/info/gg201 denotes Alg11
T6 1701-1706 https://acgg.asia/db/ggdb/info/gg201 denotes Alg11

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 1651-1658 Glycan_Motif denotes mannose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ

GGDB-2020

Id Subject Object Predicate Lexical cue
T1 10-15 https://acgg.asia/db/ggdb/info/gg201 denotes ALG11
T2 614-619 https://acgg.asia/db/ggdb/info/gg201 denotes ALG11
T3 1308-1313 https://acgg.asia/db/ggdb/info/gg201 denotes ALG11
T4 1429-1434 https://acgg.asia/db/ggdb/info/gg201 denotes Alg11
T5 1543-1548 https://acgg.asia/db/ggdb/info/gg201 denotes Alg11
T6 1701-1706 https://acgg.asia/db/ggdb/info/gg201 denotes Alg11

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 1651-1658 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose

sentences

Id Subject Object Predicate Lexical cue
T1 0-188 Sentence denotes The yeast ALG11 gene specifies addition of the terminal alpha 1,2-Man to the Man5GlcNAc2-PP-dolichol N-glycosylation intermediate formed on the cytosolic side of the endoplasmic reticulum.
T2 189-396 Sentence denotes The initial steps in N-linked glycosylation involve the synthesis of a lipid-linked core oligosaccharide followed by the transfer of the core glycan to nascent polypeptides in the endoplasmic reticulum (ER).
T3 397-595 Sentence denotes Here, we describe alg11, a new yeast glycosylation mutant that is defective in the last step of the synthesis of the Man(5)GlcNAc(2)-PP-dolichol core oligosaccharide on the cytosolic face of the ER.
T4 596-682 Sentence denotes A deletion of the ALG11 gene leads to poor growth and temperature-sensitive lethality.
T5 683-889 Sentence denotes In an alg11 lesion, both Man(3)GlcNAc(2)-PP-dolichol and Man(4)GlcNAc(2)-PP-dolichol are translocated into the ER lumen as substrates for the Man-P-dolichol-dependent sugar transferases in this compartment.
T6 890-1016 Sentence denotes This leads to a unique family of oligosaccharide structures lacking one or both of the lower arm alpha1,2-linked Man residues.
T7 1017-1226 Sentence denotes The former are elongated to mannan, whereas the latter are poor substrates for outerchain initiation by Ochlp (Nakayama, K.-I., Nakanishi-Shindo, Y., Tanaka, A., Haga-Toda, Y., and Jigami, Y. (1997) FEBS Lett.
T8 1227-1303 Sentence denotes 412, 547-550) and accumulate largely as truncated biosynthetic end products.
T9 1304-1424 Sentence denotes The ALG11 gene is predicted to encode a 63.1-kDa membrane protein that by indirect immunofluorescence resides in the ER.
T10 1425-1521 Sentence denotes The Alg11 protein is highly conserved, with homologs in fission yeast, worms, flies, and plants.
T11 1522-1687 Sentence denotes In addition to these Alg11-related proteins, Alg11p is also similar to Alg2p, a protein that regulates the addition of the third mannose to the core oligosaccharide.
T12 1688-1921 Sentence denotes All of these Alg11-related proteins share a 23-amino acid sequence that is found in over 60 proteins from bacteria to man whose function is in sugar metabolism, implicating this sequence as a potential sugar nucleotide binding motif.

glycogenes

Id Subject Object Predicate Lexical cue
PD-GlycoGenes20190927-B_T1 10-15 https://acgg.asia/db/ggdb/info/gg201 denotes ALG11
PD-GlycoGenes20190927-B_T2 415-420 https://acgg.asia/db/ggdb/info/gg201 denotes alg11
PD-GlycoGenes20190927-B_T3 614-619 https://acgg.asia/db/ggdb/info/gg201 denotes ALG11
PD-GlycoGenes20190927-B_T4 689-694 https://acgg.asia/db/ggdb/info/gg201 denotes alg11
PD-GlycoGenes20190927-B_T5 1256-1263 https://acgg.asia/db/ggdb/info/gg171 denotes largely
PD-GlycoGenes20190927-B_T6 1308-1313 https://acgg.asia/db/ggdb/info/gg201 denotes ALG11
PD-GlycoGenes20190927-B_T7 1429-1434 https://acgg.asia/db/ggdb/info/gg201 denotes Alg11
PD-GlycoGenes20190927-B_T8 1543-1548 https://acgg.asia/db/ggdb/info/gg201 denotes Alg11
PD-GlycoGenes20190927-B_T9 1701-1706 https://acgg.asia/db/ggdb/info/gg201 denotes Alg11

NGLY1-deficiency

Id Subject Object Predicate Lexical cue
PD-NGLY1-deficiency-B_T1 520-526 chem:24139 denotes GlcNAc
PD-NGLY1-deficiency-B_T2 714-720 chem:24139 denotes GlcNAc
PD-NGLY1-deficiency-B_T3 746-752 chem:24139 denotes GlcNAc

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 634-645 Phenotype denotes poor growth HP:0001510

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 1794-1802 OrganismTaxon denotes bacteria 2|629395

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 178-187 Body_part denotes reticulum http://purl.obolibrary.org/obo/UBERON_0007361
T2 381-390 Body_part denotes reticulum http://purl.obolibrary.org/obo/UBERON_0007361
T3 580-584 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T4 797-802 Body_part denotes lumen http://purl.obolibrary.org/obo/UBERON_0000464
T5 977-986 Body_part denotes lower arm http://purl.obolibrary.org/obo/UBERON_0002386
T6 1353-1361 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158