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sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-109 Sentence denotes Enhanced expression of a-series gangliosides in fibroblasts of patients with peroxisome biogenesis disorders.
TextSentencer_T2 110-258 Sentence denotes Peroxisome biogenesis disorders (PBD) are classified into Zellweger syndrome (ZS), infantile Refsum disease (IRD) and neonatal adrenoleukodystrophy.
TextSentencer_T3 259-362 Sentence denotes Disturbances in the differentiation of neural cells such as migration arrest are characteristic of PBD.
TextSentencer_T4 363-435 Sentence denotes So far the pathogenesis of these disturbances is not clearly understood.
TextSentencer_T5 436-535 Sentence denotes We describe an altered metabolism of glycosphingolipids in PBD which has not yet been investigated.
TextSentencer_T6 536-660 Sentence denotes We observed an increased amount of a-series gangliosides, GM2, GM1 and GD1a, in the fibroblasts of patients with ZS and IRD.
TextSentencer_T7 661-745 Sentence denotes Gangliosides GM1 and GD1a were not present in detectable amounts in normal subjects.
TextSentencer_T8 746-920 Sentence denotes A key step in the synthesis of a-series gangliosides is a transfer of GalNAc to ganglioside GM3, so we determined the level of ganglioside GM3 by immunohistochemical methods.
TextSentencer_T9 921-1054 Sentence denotes We found a granular structure, which was positive toward anti-ganglioside GM3 antibody in the cytoplasm of the patients' fibroblasts.
TextSentencer_T10 1055-1138 Sentence denotes In control cells, the cell membrane was slightly positive toward anti-GM3 antibody.
TextSentencer_T11 1139-1309 Sentence denotes These results may help to clarify the pathogenesis of PBD with respect to the functional roles of glycosphingolipids in cell differentiation, proliferation and apoptosis.
T1 0-109 Sentence denotes Enhanced expression of a-series gangliosides in fibroblasts of patients with peroxisome biogenesis disorders.
T2 110-258 Sentence denotes Peroxisome biogenesis disorders (PBD) are classified into Zellweger syndrome (ZS), infantile Refsum disease (IRD) and neonatal adrenoleukodystrophy.
T3 259-362 Sentence denotes Disturbances in the differentiation of neural cells such as migration arrest are characteristic of PBD.
T4 363-435 Sentence denotes So far the pathogenesis of these disturbances is not clearly understood.
T5 436-535 Sentence denotes We describe an altered metabolism of glycosphingolipids in PBD which has not yet been investigated.
T6 536-660 Sentence denotes We observed an increased amount of a-series gangliosides, GM2, GM1 and GD1a, in the fibroblasts of patients with ZS and IRD.
T7 661-745 Sentence denotes Gangliosides GM1 and GD1a were not present in detectable amounts in normal subjects.
T8 746-920 Sentence denotes A key step in the synthesis of a-series gangliosides is a transfer of GalNAc to ganglioside GM3, so we determined the level of ganglioside GM3 by immunohistochemical methods.
T9 921-1054 Sentence denotes We found a granular structure, which was positive toward anti-ganglioside GM3 antibody in the cytoplasm of the patients' fibroblasts.
T10 1055-1138 Sentence denotes In control cells, the cell membrane was slightly positive toward anti-GM3 antibody.
T11 1139-1309 Sentence denotes These results may help to clarify the pathogenesis of PBD with respect to the functional roles of glycosphingolipids in cell differentiation, proliferation and apoptosis.

PubCasesORDO

Id Subject Object Predicate Lexical cue
AB1 168-186 ORDO:912 denotes Zellweger syndrome
AB2 193-217 ORDO:772 denotes infantile Refsum disease
AB3 219-222 ORDO:772 denotes IRD
AB4 228-257 ORDO:44 denotes neonatal adrenoleukodystrophy
AB5 656-659 ORDO:772 denotes IRD

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 77-108 Disease denotes peroxisome biogenesis disorders http://purl.obolibrary.org/obo/MONDO_0019234|http://purl.obolibrary.org/obo/MONDO_0019609
T3 110-141 Disease denotes Peroxisome biogenesis disorders http://purl.obolibrary.org/obo/MONDO_0019234|http://purl.obolibrary.org/obo/MONDO_0019609
T5 143-146 Disease denotes PBD http://purl.obolibrary.org/obo/MONDO_0019234
T6 168-186 Disease denotes Zellweger syndrome http://purl.obolibrary.org/obo/MONDO_0019609
T7 188-190 Disease denotes ZS http://purl.obolibrary.org/obo/MONDO_0019609
T8 193-217 Disease denotes infantile Refsum disease http://purl.obolibrary.org/obo/MONDO_0009959|http://purl.obolibrary.org/obo/MONDO_0019174
T10 219-222 Disease denotes IRD http://purl.obolibrary.org/obo/MONDO_0019174|http://purl.obolibrary.org/obo/MONDO_0009959
T12 228-257 Disease denotes neonatal adrenoleukodystrophy http://purl.obolibrary.org/obo/MONDO_0018598
T13 358-361 Disease denotes PBD http://purl.obolibrary.org/obo/MONDO_0019234
T14 495-498 Disease denotes PBD http://purl.obolibrary.org/obo/MONDO_0019234
T15 649-651 Disease denotes ZS http://purl.obolibrary.org/obo/MONDO_0019609
T16 656-659 Disease denotes IRD http://purl.obolibrary.org/obo/MONDO_0019174|http://purl.obolibrary.org/obo/MONDO_0009959
T18 1193-1196 Disease denotes PBD http://purl.obolibrary.org/obo/MONDO_0019234

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 594-597 Glycan denotes GM2 https://api.glycosmos.org/wurcs2image/latest/png/binary/G79389NT
T2 599-602 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T3 607-611 Glycan denotes GD1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE
T4 674-677 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T5 682-686 Glycan denotes GD1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE
T6 816-822 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T7 838-841 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T8 885-888 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T9 995-998 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T10 1125-1128 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK

GlyCosmos15-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 77-108 Disease denotes peroxisome biogenesis disorders http://purl.obolibrary.org/obo/MONDO_0019234|http://purl.obolibrary.org/obo/MONDO_0019609
T3 110-141 Disease denotes Peroxisome biogenesis disorders http://purl.obolibrary.org/obo/MONDO_0019234|http://purl.obolibrary.org/obo/MONDO_0019609
T5 143-146 Disease denotes PBD http://purl.obolibrary.org/obo/MONDO_0019234
T6 168-186 Disease denotes Zellweger syndrome http://purl.obolibrary.org/obo/MONDO_0019609
T7 188-190 Disease denotes ZS http://purl.obolibrary.org/obo/MONDO_0019609
T8 193-217 Disease denotes infantile Refsum disease http://purl.obolibrary.org/obo/MONDO_0009959|http://purl.obolibrary.org/obo/MONDO_0019174
T10 219-222 Disease denotes IRD http://purl.obolibrary.org/obo/MONDO_0019174|http://purl.obolibrary.org/obo/MONDO_0009959
T12 228-257 Disease denotes neonatal adrenoleukodystrophy http://purl.obolibrary.org/obo/MONDO_0018598
T13 358-361 Disease denotes PBD http://purl.obolibrary.org/obo/MONDO_0019234
T14 495-498 Disease denotes PBD http://purl.obolibrary.org/obo/MONDO_0019234
T15 649-651 Disease denotes ZS http://purl.obolibrary.org/obo/MONDO_0019609
T16 656-659 Disease denotes IRD http://purl.obolibrary.org/obo/MONDO_0019174|http://purl.obolibrary.org/obo/MONDO_0009959
T18 1193-1196 Disease denotes PBD http://purl.obolibrary.org/obo/MONDO_0019234

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 48-59 Cell denotes fibroblasts http://purl.obolibrary.org/obo/CL:0000057
T2 298-310 Cell denotes neural cells http://purl.obolibrary.org/obo/CL:0002319
T3 620-631 Cell denotes fibroblasts http://purl.obolibrary.org/obo/CL:0000057
T4 1042-1053 Cell denotes fibroblasts http://purl.obolibrary.org/obo/CL:0000057

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 48-59 Body_part denotes fibroblasts http://purl.obolibrary.org/obo/CL_0000057
T2 298-310 Body_part denotes neural cells http://purl.obolibrary.org/obo/CL_0002319
T3 620-631 Body_part denotes fibroblasts http://purl.obolibrary.org/obo/CL_0000057
T4 1015-1024 Body_part denotes cytoplasm http://purl.obolibrary.org/obo/GO_0005737
T5 1042-1053 Body_part denotes fibroblasts http://purl.obolibrary.org/obo/CL_0000057
T6 1077-1090 Body_part denotes cell membrane http://purl.obolibrary.org/obo/GO_0005886

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-109 Sentence denotes Enhanced expression of a-series gangliosides in fibroblasts of patients with peroxisome biogenesis disorders.
TextSentencer_T2 110-258 Sentence denotes Peroxisome biogenesis disorders (PBD) are classified into Zellweger syndrome (ZS), infantile Refsum disease (IRD) and neonatal adrenoleukodystrophy.
TextSentencer_T3 259-362 Sentence denotes Disturbances in the differentiation of neural cells such as migration arrest are characteristic of PBD.
TextSentencer_T4 363-435 Sentence denotes So far the pathogenesis of these disturbances is not clearly understood.
TextSentencer_T5 436-535 Sentence denotes We describe an altered metabolism of glycosphingolipids in PBD which has not yet been investigated.
TextSentencer_T6 536-660 Sentence denotes We observed an increased amount of a-series gangliosides, GM2, GM1 and GD1a, in the fibroblasts of patients with ZS and IRD.
TextSentencer_T7 661-745 Sentence denotes Gangliosides GM1 and GD1a were not present in detectable amounts in normal subjects.
TextSentencer_T8 746-920 Sentence denotes A key step in the synthesis of a-series gangliosides is a transfer of GalNAc to ganglioside GM3, so we determined the level of ganglioside GM3 by immunohistochemical methods.
TextSentencer_T9 921-1054 Sentence denotes We found a granular structure, which was positive toward anti-ganglioside GM3 antibody in the cytoplasm of the patients' fibroblasts.
TextSentencer_T10 1055-1138 Sentence denotes In control cells, the cell membrane was slightly positive toward anti-GM3 antibody.
TextSentencer_T11 1139-1309 Sentence denotes These results may help to clarify the pathogenesis of PBD with respect to the functional roles of glycosphingolipids in cell differentiation, proliferation and apoptosis.
T1 0-109 Sentence denotes Enhanced expression of a-series gangliosides in fibroblasts of patients with peroxisome biogenesis disorders.
T2 110-258 Sentence denotes Peroxisome biogenesis disorders (PBD) are classified into Zellweger syndrome (ZS), infantile Refsum disease (IRD) and neonatal adrenoleukodystrophy.
T3 259-362 Sentence denotes Disturbances in the differentiation of neural cells such as migration arrest are characteristic of PBD.
T4 363-435 Sentence denotes So far the pathogenesis of these disturbances is not clearly understood.
T5 436-535 Sentence denotes We describe an altered metabolism of glycosphingolipids in PBD which has not yet been investigated.
T6 536-660 Sentence denotes We observed an increased amount of a-series gangliosides, GM2, GM1 and GD1a, in the fibroblasts of patients with ZS and IRD.
T7 661-745 Sentence denotes Gangliosides GM1 and GD1a were not present in detectable amounts in normal subjects.
T8 746-920 Sentence denotes A key step in the synthesis of a-series gangliosides is a transfer of GalNAc to ganglioside GM3, so we determined the level of ganglioside GM3 by immunohistochemical methods.
T9 921-1054 Sentence denotes We found a granular structure, which was positive toward anti-ganglioside GM3 antibody in the cytoplasm of the patients' fibroblasts.
T10 1055-1138 Sentence denotes In control cells, the cell membrane was slightly positive toward anti-GM3 antibody.
T11 1139-1309 Sentence denotes These results may help to clarify the pathogenesis of PBD with respect to the functional roles of glycosphingolipids in cell differentiation, proliferation and apoptosis.

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-109 Sentence denotes Enhanced expression of a-series gangliosides in fibroblasts of patients with peroxisome biogenesis disorders.
T2 110-258 Sentence denotes Peroxisome biogenesis disorders (PBD) are classified into Zellweger syndrome (ZS), infantile Refsum disease (IRD) and neonatal adrenoleukodystrophy.
T3 259-362 Sentence denotes Disturbances in the differentiation of neural cells such as migration arrest are characteristic of PBD.
T4 363-435 Sentence denotes So far the pathogenesis of these disturbances is not clearly understood.
T5 436-535 Sentence denotes We describe an altered metabolism of glycosphingolipids in PBD which has not yet been investigated.
T6 536-660 Sentence denotes We observed an increased amount of a-series gangliosides, GM2, GM1 and GD1a, in the fibroblasts of patients with ZS and IRD.
T7 661-745 Sentence denotes Gangliosides GM1 and GD1a were not present in detectable amounts in normal subjects.
T8 746-920 Sentence denotes A key step in the synthesis of a-series gangliosides is a transfer of GalNAc to ganglioside GM3, so we determined the level of ganglioside GM3 by immunohistochemical methods.
T9 921-1054 Sentence denotes We found a granular structure, which was positive toward anti-ganglioside GM3 antibody in the cytoplasm of the patients' fibroblasts.
T10 1055-1138 Sentence denotes In control cells, the cell membrane was slightly positive toward anti-GM3 antibody.
T11 1139-1309 Sentence denotes These results may help to clarify the pathogenesis of PBD with respect to the functional roles of glycosphingolipids in cell differentiation, proliferation and apoptosis.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 594-597 Glycan denotes GM2 https://api.glycosmos.org/wurcs2image/latest/png/binary/G79389NT
T2 599-602 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T3 607-611 Glycan denotes GD1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE
T4 674-677 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T5 682-686 Glycan denotes GD1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE
T6 816-822 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T7 838-841 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T8 885-888 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T9 995-998 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T10 1125-1128 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 599-602 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T2 607-611 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GD1a http://www.glycoepitope.jp/epitopes/EP0056
T3 674-677 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T4 682-686 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GD1a http://www.glycoepitope.jp/epitopes/EP0056

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 599-602 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T2 607-611 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GD1a http://www.glycoepitope.jp/epitopes/EP0056
T3 674-677 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T4 682-686 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GD1a http://www.glycoepitope.jp/epitopes/EP0056

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 48-59 Body_part denotes fibroblasts http://purl.obolibrary.org/obo/CL_0000057
T2 298-310 Body_part denotes neural cells http://purl.obolibrary.org/obo/CL_0002319
T3 620-631 Body_part denotes fibroblasts http://purl.obolibrary.org/obo/CL_0000057
T4 1015-1024 Body_part denotes cytoplasm http://purl.obolibrary.org/obo/GO_0005737
T5 1042-1053 Body_part denotes fibroblasts http://purl.obolibrary.org/obo/CL_0000057
T6 1077-1090 Body_part denotes cell membrane http://purl.obolibrary.org/obo/GO_0005886

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 48-59 Cell denotes fibroblasts http://purl.obolibrary.org/obo/CL:0000057
T2 298-310 Cell denotes neural cells http://purl.obolibrary.org/obo/CL:0002319
T3 620-631 Cell denotes fibroblasts http://purl.obolibrary.org/obo/CL:0000057
T4 1042-1053 Cell denotes fibroblasts http://purl.obolibrary.org/obo/CL:0000057