PubMed:11264415
Annnotations
Oryza-OGER
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 27-35 | http://www.ncbi.nlm.nih.gov/taxonomy/15945 | denotes | teosinte |
| T2 | 27-35 | http://www.ncbi.nlm.nih.gov/taxonomy/4576 | denotes | teosinte |
| T3 | 27-35 | http://www.ncbi.nlm.nih.gov/taxonomy/4580 | denotes | teosinte |
| T4 | 27-35 | http://id.nlm.nih.gov/mesh/D003313 | denotes | teosinte |
| T5 | 45-49 | http://purl.obolibrary.org/obo/SO_0000704 | denotes | gene |
| T6 | 56-61 | http://www.ncbi.nlm.nih.gov/taxonomy/4577 | denotes | maize |
| T7 | 56-61 | http://id.nlm.nih.gov/mesh/D003313 | denotes | maize |
| T8 | 62-65 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T9 | 62-65 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T10 | 74-81 | http://id.nlm.nih.gov/mesh/D006109 | denotes | grasses |
| T11 | 131-136 | SDG725 | denotes | small |
| T12 | 164-167 | http://web.expasy.org/cellosaurus/CVCL_E773 | denotes | may |
| T13 | 182-185 | http://purl.obolibrary.org/obo/PR_Q9NZC7 | denotes | for |
| T14 | 182-185 | http://purl.obolibrary.org/obo/PR_000001036 | denotes | for |
| T15 | 259-267 | http://www.ncbi.nlm.nih.gov/taxonomy/15945 | denotes | teosinte |
| T16 | 259-267 | http://www.ncbi.nlm.nih.gov/taxonomy/4576 | denotes | teosinte |
| T17 | 259-267 | http://www.ncbi.nlm.nih.gov/taxonomy/4580 | denotes | teosinte |
| T18 | 259-267 | http://id.nlm.nih.gov/mesh/D003313 | denotes | teosinte |
| T19 | 259-277 | FC1 | denotes | teosinte branched1 |
| T20 | 279-282 | http://purl.obolibrary.org/obo/PR_Q96AG3 | denotes | tb1 |
| T21 | 279-282 | http://purl.obolibrary.org/obo/PR_000029734 | denotes | tb1 |
| T22 | 279-282 | http://www.ncbi.nlm.nih.gov/taxonomy/1935941 | denotes | tb1 |
| T23 | 301-314 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
| T24 | 301-321 | http://id.nlm.nih.gov/mesh/D014157 | denotes | transcription factor |
| T25 | 301-321 | http://purl.obolibrary.org/obo/GO_0000981 | denotes | transcription factor |
| T26 | 337-341 | http://purl.obolibrary.org/obo/UBERON_2002175 | denotes | role |
| T27 | 337-341 | http://purl.obolibrary.org/obo/CHEBI_50906 | denotes | role |
| T28 | 380-385 | http://www.ncbi.nlm.nih.gov/taxonomy/4577 | denotes | maize |
| T29 | 380-385 | http://id.nlm.nih.gov/mesh/D003313 | denotes | maize |
| T30 | 410-418 | http://www.ncbi.nlm.nih.gov/taxonomy/15945 | denotes | teosinte |
| T31 | 410-418 | http://www.ncbi.nlm.nih.gov/taxonomy/4576 | denotes | teosinte |
| T32 | 410-418 | http://www.ncbi.nlm.nih.gov/taxonomy/4580 | denotes | teosinte |
| T33 | 410-418 | http://id.nlm.nih.gov/mesh/D003313 | denotes | teosinte |
| T34 | 442-445 | http://purl.obolibrary.org/obo/PR_Q9VVR1 | denotes | not |
| T35 | 442-445 | http://purl.obolibrary.org/obo/PR_000011409 | denotes | not |
| T36 | 442-445 | http://purl.obolibrary.org/obo/PR_P43354 | denotes | not |
| T37 | 442-445 | http://purl.obolibrary.org/obo/PR_000003944 | denotes | not |
| T38 | 442-445 | http://purl.obolibrary.org/obo/PR_Q5TIS6 | denotes | not |
| T39 | 442-445 | http://purl.obolibrary.org/obo/PR_Q92685 | denotes | not |
| T40 | 442-445 | http://purl.obolibrary.org/obo/PR_Q8K2A8 | denotes | not |
| T41 | 442-445 | http://purl.obolibrary.org/obo/PR_000011336 | denotes | not |
| T42 | 446-449 | http://purl.obolibrary.org/obo/PR_Q96AG3 | denotes | tb1 |
| T43 | 446-449 | http://purl.obolibrary.org/obo/PR_000029734 | denotes | tb1 |
| T44 | 446-449 | http://www.ncbi.nlm.nih.gov/taxonomy/1935941 | denotes | tb1 |
| T45 | 467-471 | http://purl.obolibrary.org/obo/UBERON_2002175 | denotes | role |
| T46 | 467-471 | http://purl.obolibrary.org/obo/CHEBI_50906 | denotes | role |
| T47 | 534-539 | http://www.ncbi.nlm.nih.gov/taxonomy/4577 | denotes | maize |
| T48 | 534-539 | http://id.nlm.nih.gov/mesh/D003313 | denotes | maize |
| T49 | 549-552 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T50 | 549-552 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T51 | 573-576 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T52 | 573-576 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T53 | 588-591 | http://purl.obolibrary.org/obo/PR_Q96AG3 | denotes | tb1 |
| T54 | 588-591 | http://purl.obolibrary.org/obo/PR_000029734 | denotes | tb1 |
| T55 | 588-591 | http://www.ncbi.nlm.nih.gov/taxonomy/1935941 | denotes | tb1 |
| T56 | 609-613 | http://purl.obolibrary.org/obo/PR_000024065 | denotes | this |
| T57 | 609-613 | http://purl.obolibrary.org/obo/PR_O32583 | denotes | this |
| T58 | 633-636 | http://purl.obolibrary.org/obo/PR_Q96AG3 | denotes | tb1 |
| T59 | 633-636 | http://purl.obolibrary.org/obo/PR_000029734 | denotes | tb1 |
| T60 | 633-636 | http://www.ncbi.nlm.nih.gov/taxonomy/1935941 | denotes | tb1 |
| T61 | 689-692 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T62 | 689-692 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T63 | 698-703 | http://www.ncbi.nlm.nih.gov/taxonomy/32644 | denotes | other |
| T64 | 704-711 | http://id.nlm.nih.gov/mesh/D006109 | denotes | grasses |
| T65 | 744-747 | http://purl.obolibrary.org/obo/PR_Q96AG3 | denotes | TB1 |
| T66 | 744-747 | http://purl.obolibrary.org/obo/PR_000029734 | denotes | TB1 |
| T67 | 744-747 | http://www.ncbi.nlm.nih.gov/taxonomy/1935941 | denotes | TB1 |
| T68 | 748-755 | http://purl.obolibrary.org/obo/CHEBI_11122 | denotes | protein |
| T69 | 748-755 | http://purl.obolibrary.org/obo/SO_0000104 | denotes | protein |
| T70 | 748-755 | http://purl.obolibrary.org/obo/PR_000000001 | denotes | protein |
| T71 | 748-755 | http://purl.obolibrary.org/obo/CHEBI_16541 | denotes | protein |
| T72 | 748-755 | http://purl.obolibrary.org/obo/GO_0003675 | denotes | protein |
| T73 | 748-755 | http://purl.obolibrary.org/obo/CHEBI_36080 | denotes | protein |
| T74 | 784-793 | http://purl.obolibrary.org/obo/SO_0000856 | denotes | conserved |
| T75 | 814-821 | http://purl.obolibrary.org/obo/SO_0001074 | denotes | outside |
| T76 | 869-873 | http://purl.obolibrary.org/obo/SO_0000704 | denotes | gene |
| T77 | 874-877 | http://purl.obolibrary.org/obo/SO_0001180 | denotes | are |
| T78 | 874-877 | http://purl.obolibrary.org/obo/SO_0001853 | denotes | are |
| T79 | 921-933 | http://purl.obolibrary.org/obo/SO_1000002 | denotes | substitution |
| T80 | 939-942 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T81 | 939-942 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T82 | 1001-1004 | http://purl.obolibrary.org/obo/PR_O15534 | denotes | per |
| T83 | 1001-1004 | http://purl.obolibrary.org/obo/PR_000012547 | denotes | per |
| T84 | 1001-1004 | http://purl.obolibrary.org/obo/PR_O35973 | denotes | per |
| T85 | 1001-1004 | http://purl.obolibrary.org/obo/PR_P07663 | denotes | per |
| T86 | 1019-1023 | http://purl.obolibrary.org/obo/SO_0000409 | denotes | site |
| T87 | 1019-1023 | http://purl.obolibrary.org/obo/SO_0000839 | denotes | site |
| T88 | 1019-1023 | http://purl.obolibrary.org/obo/SO_0000408 | denotes | site |
| T89 | 1034-1044 | http://purl.obolibrary.org/obo/SO_0001815 | denotes | synonymous |
| T90 | 1059-1062 | http://purl.obolibrary.org/obo/PR_O15534 | denotes | per |
| T91 | 1059-1062 | http://purl.obolibrary.org/obo/PR_000012547 | denotes | per |
| T92 | 1059-1062 | http://purl.obolibrary.org/obo/PR_O35973 | denotes | per |
| T93 | 1059-1062 | http://purl.obolibrary.org/obo/PR_P07663 | denotes | per |
| T94 | 1063-1073 | http://purl.obolibrary.org/obo/SO_0001815 | denotes | synonymous |
| T95 | 1074-1078 | http://purl.obolibrary.org/obo/SO_0000409 | denotes | site |
| T96 | 1074-1078 | http://purl.obolibrary.org/obo/SO_0000839 | denotes | site |
| T97 | 1074-1078 | http://purl.obolibrary.org/obo/SO_0000408 | denotes | site |
| T98 | 1086-1089 | http://purl.obolibrary.org/obo/PR_000017371 | denotes | was |
| T99 | 1086-1089 | http://purl.obolibrary.org/obo/PR_P42768 | denotes | was |
| T100 | 1086-1089 | http://purl.obolibrary.org/obo/PR_P70315 | denotes | was |
| T101 | 1086-1089 | http://id.nlm.nih.gov/mesh/D014923 | denotes | was |
| T102 | 1090-1093 | http://purl.obolibrary.org/obo/PR_Q9VVR1 | denotes | not |
| T103 | 1090-1093 | http://purl.obolibrary.org/obo/PR_000011409 | denotes | not |
| T104 | 1090-1093 | http://purl.obolibrary.org/obo/PR_P43354 | denotes | not |
| T105 | 1090-1093 | http://purl.obolibrary.org/obo/PR_000003944 | denotes | not |
| T106 | 1090-1093 | http://purl.obolibrary.org/obo/PR_Q5TIS6 | denotes | not |
| T107 | 1090-1093 | http://purl.obolibrary.org/obo/PR_Q92685 | denotes | not |
| T108 | 1090-1093 | http://purl.obolibrary.org/obo/PR_Q8K2A8 | denotes | not |
| T109 | 1090-1093 | http://purl.obolibrary.org/obo/PR_000011336 | denotes | not |
| T110 | 1148-1151 | http://purl.obolibrary.org/obo/PR_Q9NZC7 | denotes | for |
| T111 | 1148-1151 | http://purl.obolibrary.org/obo/PR_000001036 | denotes | for |
| T112 | 1237-1240 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T113 | 1237-1240 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T114 | 1241-1244 | http://purl.obolibrary.org/obo/PR_000017371 | denotes | was |
| T115 | 1241-1244 | http://purl.obolibrary.org/obo/PR_P42768 | denotes | was |
| T116 | 1241-1244 | http://purl.obolibrary.org/obo/PR_P70315 | denotes | was |
| T117 | 1241-1244 | http://id.nlm.nih.gov/mesh/D014923 | denotes | was |
| T118 | 1273-1278 | http://www.ncbi.nlm.nih.gov/taxonomy/32644 | denotes | other |
| T119 | 1279-1284 | http://id.nlm.nih.gov/mesh/D010944 | denotes | plant |
| T120 | 1449-1453 | http://purl.obolibrary.org/obo/PR_000024065 | denotes | this |
| T121 | 1449-1453 | http://purl.obolibrary.org/obo/PR_O32583 | denotes | this |
| T122 | 1496-1508 | http://purl.obolibrary.org/obo/SO_1000002 | denotes | substitution |
| T123 | 1552-1562 | http://purl.obolibrary.org/obo/SO_0001815 | denotes | synonymous |
| T124 | 1563-1575 | http://purl.obolibrary.org/obo/SO_1000002 | denotes | substitution |
| T125 | 1581-1584 | http://purl.obolibrary.org/obo/CHEBI_52027 | denotes | did |
| T126 | 1585-1588 | http://purl.obolibrary.org/obo/PR_Q9VVR1 | denotes | not |
| T127 | 1585-1588 | http://purl.obolibrary.org/obo/PR_000011409 | denotes | not |
| T128 | 1585-1588 | http://purl.obolibrary.org/obo/PR_P43354 | denotes | not |
| T129 | 1585-1588 | http://purl.obolibrary.org/obo/PR_000003944 | denotes | not |
| T130 | 1585-1588 | http://purl.obolibrary.org/obo/PR_Q5TIS6 | denotes | not |
| T131 | 1585-1588 | http://purl.obolibrary.org/obo/PR_Q92685 | denotes | not |
| T132 | 1585-1588 | http://purl.obolibrary.org/obo/PR_Q8K2A8 | denotes | not |
| T133 | 1585-1588 | http://purl.obolibrary.org/obo/PR_000011336 | denotes | not |
| T134 | 1626-1629 | http://purl.obolibrary.org/obo/PR_Q96AG3 | denotes | tb1 |
| T135 | 1626-1629 | http://purl.obolibrary.org/obo/PR_000029734 | denotes | tb1 |
| T136 | 1626-1629 | http://www.ncbi.nlm.nih.gov/taxonomy/1935941 | denotes | tb1 |
| T137 | 1787-1790 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T138 | 1787-1790 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T139 | 1825-1828 | http://purl.obolibrary.org/obo/SO_0001180 | denotes | are |
| T140 | 1825-1828 | http://purl.obolibrary.org/obo/SO_0001853 | denotes | are |
OryzaGP_2021
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 131-136 | http://identifiers.org/oryzabase.gene/11165 | denotes | small |
| T2 | 259-277 | http://identifiers.org/oryzabase.gene/565 | denotes | teosinte branched1 |
| T3 | 259-277 | http://identifiers.org/oryzabase.gene/12384 | denotes | teosinte branched1 |
| T4 | 279-282 | http://identifiers.org/oryzabase.gene/565 | denotes | tb1 |
| T5 | 446-449 | http://identifiers.org/oryzabase.gene/565 | denotes | tb1 |
| T6 | 588-591 | http://identifiers.org/oryzabase.gene/565 | denotes | tb1 |
| T7 | 633-636 | http://identifiers.org/oryzabase.gene/565 | denotes | tb1 |
| T8 | 744-747 | http://identifiers.org/oryzabase.gene/565 | denotes | TB1 |
| T9 | 1626-1629 | http://identifiers.org/oryzabase.gene/565 | denotes | tb1 |
| T37373 | 131-136 | http://identifiers.org/ricegap/LOC_Os02g34850 | denotes | small |
| T90246 | 259-277 | http://identifiers.org/ricegap/LOC_Os06g12230 | denotes | teosinte branched1 |
| T60095 | 259-277 | http://identifiers.org/ricegap/LOC_Os03g49880 | denotes | teosinte branched1 |
| T9642 | 279-282 | http://identifiers.org/ricegap/LOC_Os03g49880 | denotes | tb1 |
| T30738 | 279-282 | http://identifiers.org/ricegap/LOC_Os06g12230 | denotes | tb1 |
| T32868 | 446-449 | http://identifiers.org/ricegap/LOC_Os03g49880 | denotes | tb1 |
| T51744 | 446-449 | http://identifiers.org/ricegap/LOC_Os06g12230 | denotes | tb1 |
| T35196 | 588-591 | http://identifiers.org/ricegap/LOC_Os03g49880 | denotes | tb1 |
| T94671 | 588-591 | http://identifiers.org/ricegap/LOC_Os06g12230 | denotes | tb1 |
| T10 | 633-636 | http://identifiers.org/ricegap/LOC_Os03g49880 | denotes | tb1 |
| T11 | 633-636 | http://identifiers.org/ricegap/LOC_Os06g12230 | denotes | tb1 |
| T12 | 744-747 | http://identifiers.org/ricegap/LOC_Os03g49880 | denotes | TB1 |
| T13 | 1626-1629 | http://identifiers.org/ricegap/LOC_Os03g49880 | denotes | tb1 |
| T14 | 1626-1629 | http://identifiers.org/ricegap/LOC_Os06g12230 | denotes | tb1 |
| T26174 | 131-136 | http://identifiers.org/rapdb.locus/Os02g0554000 | denotes | small |
| T39303 | 259-277 | http://identifiers.org/rapdb.locus/Os06g0226700 | denotes | teosinte branched1 |
| T74501 | 259-277 | http://identifiers.org/rapdb.locus/Os03g0706500 | denotes | teosinte branched1 |
| T99084 | 279-282 | http://identifiers.org/rapdb.locus/Os03g0706500 | denotes | tb1 |
| T95272 | 279-282 | http://identifiers.org/rapdb.locus/Os06g0226700 | denotes | tb1 |
| T31966 | 446-449 | http://identifiers.org/rapdb.locus/Os03g0706500 | denotes | tb1 |
| T34107 | 446-449 | http://identifiers.org/rapdb.locus/Os06g0226700 | denotes | tb1 |
| T74021 | 588-591 | http://identifiers.org/rapdb.locus/Os03g0706500 | denotes | tb1 |
| T18156 | 588-591 | http://identifiers.org/rapdb.locus/Os06g0226700 | denotes | tb1 |
| T49844 | 633-636 | http://identifiers.org/rapdb.locus/Os03g0706500 | denotes | tb1 |
| T48024 | 633-636 | http://identifiers.org/rapdb.locus/Os06g0226700 | denotes | tb1 |
| T42820 | 744-747 | http://identifiers.org/rapdb.locus/Os03g0706500 | denotes | TB1 |
| T47946 | 1626-1629 | http://identifiers.org/rapdb.locus/Os03g0706500 | denotes | tb1 |
| T77702 | 1626-1629 | http://identifiers.org/rapdb.locus/Os06g0226700 | denotes | tb1 |
| T42377 | 259-277 | http://identifiers.org/uniprot/Q8LN68 | denotes | teosinte branched1 |
| T79887 | 279-282 | http://identifiers.org/uniprot/Q8LN68 | denotes | tb1 |
| T56123 | 446-449 | http://identifiers.org/uniprot/Q8LN68 | denotes | tb1 |
| T18775 | 588-591 | http://identifiers.org/uniprot/Q8LN68 | denotes | tb1 |
| T64839 | 633-636 | http://identifiers.org/uniprot/Q8LN68 | denotes | tb1 |
| T78470 | 744-747 | http://identifiers.org/uniprot/Q8LN68 | denotes | TB1 |
| T23538 | 1626-1629 | http://identifiers.org/uniprot/Q8LN68 | denotes | tb1 |
| M_0 | 279-282 | hunflair:NA:Gene | denotes | tb1 |
| M_1 | 446-449 | hunflair:NA:Gene | denotes | tb1 |
| M_2 | 588-591 | hunflair:NA:Gene | denotes | tb1 |
| M_3 | 633-636 | hunflair:NA:Gene | denotes | tb1 |
| M_4 | 1626-1629 | hunflair:NA:Gene | denotes | tb1 |
| M_5 | 259-277 | hunflair:NA:Gene | denotes | teosinte branched1 |
| M_6 | 633-651 | hunflair:NA:Gene | denotes | tb1-like sequences |
| M_7 | 56-61 | hunflair:NA:Species | denotes | maize |
| M_8 | 380-385 | hunflair:NA:Species | denotes | maize |
| M_9 | 534-539 | hunflair:NA:Species | denotes | maize |
| M_10 | 744-755 | hunflair:NA:Gene | denotes | TB1 protein |
OryzaGP_2021_v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 279-282 | http://identifiers.org/oryzabase.gene/565 | denotes | tb1 |
| T2 | 446-449 | http://identifiers.org/oryzabase.gene/565 | denotes | tb1 |
| T3 | 588-591 | http://identifiers.org/oryzabase.gene/565 | denotes | tb1 |
| T4 | 633-636 | http://identifiers.org/oryzabase.gene/565 | denotes | tb1 |
| T5 | 744-747 | http://identifiers.org/oryzabase.gene/565 | denotes | TB1 |
| T6 | 1626-1629 | http://identifiers.org/oryzabase.gene/565 | denotes | tb1 |
| T8551 | 279-282 | http://identifiers.org/rapdb.locus/Os03g0706500 | denotes | tb1 |
| T14400 | 446-449 | http://identifiers.org/rapdb.locus/Os03g0706500 | denotes | tb1 |
| T89096 | 588-591 | http://identifiers.org/rapdb.locus/Os03g0706500 | denotes | tb1 |
| T53936 | 633-636 | http://identifiers.org/rapdb.locus/Os03g0706500 | denotes | tb1 |
| T49299 | 744-747 | http://identifiers.org/rapdb.locus/Os03g0706500 | denotes | TB1 |
| T34525 | 1626-1629 | http://identifiers.org/rapdb.locus/Os03g0706500 | denotes | tb1 |
OryzaGP_2021_FLAIR
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 279-282 | hunflair:NA:Gene | denotes | tb1 |
| M_1 | 446-449 | hunflair:NA:Gene | denotes | tb1 |
| M_2 | 588-591 | hunflair:NA:Gene | denotes | tb1 |
| M_3 | 633-636 | hunflair:NA:Gene | denotes | tb1 |
| M_4 | 1626-1629 | hunflair:NA:Gene | denotes | tb1 |
| M_5 | 259-277 | hunflair:NA:Gene | denotes | teosinte branched1 |
| M_6 | 633-651 | hunflair:NA:Gene | denotes | tb1-like sequences |
| M_7 | 56-61 | hunflair:NA:Species | denotes | maize |
| M_8 | 380-385 | hunflair:NA:Species | denotes | maize |
| M_9 | 534-539 | hunflair:NA:Species | denotes | maize |
| M_10 | 744-755 | hunflair:NA:Gene | denotes | TB1 protein |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-82 | Sentence | denotes | Molecular evolution of the teosinte branched gene among maize and related grasses. |
| T2 | 83-222 | Sentence | denotes | Several authors have proposed that changes in a small number of regulatory genes may be sufficient for the evolution of novel morphologies. |
| T3 | 223-419 | Sentence | denotes | Recent analyses have indicated that teosinte branched1 (tb1), a putative bHLH transcription factor, played such a role during the morphological evolution of maize from its wild ancestor, teosinte. |
| T4 | 420-712 | Sentence | denotes | To address whether or not tb1 played a similar role during the evolution of the Andropogoneae, the tribe to which maize belongs, and to examine the rate and pattern of tb1 evolution within this tribe, we analyzed tb1-like sequences from 23 members of the Andropogoneae and five other grasses. |
| T5 | 713-836 | Sentence | denotes | Our analysis revealed that the TB1 protein evolves slowly within three conserved domains but rapidly outside these domains. |
| T6 | 837-959 | Sentence | denotes | The nonconserved regions of the gene are characterized by both a high nonsynonymous substitution rate and frequent indels. |
| T7 | 960-1171 | Sentence | denotes | The ratio of nonsynonymous substitutions per nonsynonymous site (d(N)) to synonymous substitutions per synonymous site (d(S)) was not significantly greater than 1.0, providing no evidence for positive selection. |
| T8 | 1172-1299 | Sentence | denotes | However, the d(N)/d(S) ratio varied significantly among lineages and was high compared with those of other plant nuclear genes. |
| T9 | 1300-1432 | Sentence | denotes | Variation in the d(N)/d(S) ratio among the Andropogoneae could be explained by unequal levels of purifying selection among lineages. |
| T10 | 1433-1610 | Sentence | denotes | Consistent with this interpretation, the rate of nonsynonymous substitution differed along several lineages, while the synonymous substitution rate did not differ significantly. |
| T11 | 1611-1842 | Sentence | denotes | Finally, using tb1, we examined phylogenetic relationships within the Andropogoneae. The phylogeny suggests that the tribe underwent a rapid radiation during its early history and that the monoecious Andropogoneae are polyphyletic. |
| T1 | 0-82 | Sentence | denotes | Molecular evolution of the teosinte branched gene among maize and related grasses. |
| T2 | 83-222 | Sentence | denotes | Several authors have proposed that changes in a small number of regulatory genes may be sufficient for the evolution of novel morphologies. |
| T3 | 223-419 | Sentence | denotes | Recent analyses have indicated that teosinte branched1 (tb1), a putative bHLH transcription factor, played such a role during the morphological evolution of maize from its wild ancestor, teosinte. |
| T4 | 420-712 | Sentence | denotes | To address whether or not tb1 played a similar role during the evolution of the Andropogoneae, the tribe to which maize belongs, and to examine the rate and pattern of tb1 evolution within this tribe, we analyzed tb1-like sequences from 23 members of the Andropogoneae and five other grasses. |
| T5 | 713-836 | Sentence | denotes | Our analysis revealed that the TB1 protein evolves slowly within three conserved domains but rapidly outside these domains. |
| T6 | 837-959 | Sentence | denotes | The nonconserved regions of the gene are characterized by both a high nonsynonymous substitution rate and frequent indels. |
| T7 | 960-1171 | Sentence | denotes | The ratio of nonsynonymous substitutions per nonsynonymous site (d(N)) to synonymous substitutions per synonymous site (d(S)) was not significantly greater than 1.0, providing no evidence for positive selection. |
| T8 | 1172-1299 | Sentence | denotes | However, the d(N)/d(S) ratio varied significantly among lineages and was high compared with those of other plant nuclear genes. |
| T9 | 1300-1432 | Sentence | denotes | Variation in the d(N)/d(S) ratio among the Andropogoneae could be explained by unequal levels of purifying selection among lineages. |
| T10 | 1433-1610 | Sentence | denotes | Consistent with this interpretation, the rate of nonsynonymous substitution differed along several lineages, while the synonymous substitution rate did not differ significantly. |
| T11 | 1611-1842 | Sentence | denotes | Finally, using tb1, we examined phylogenetic relationships within the Andropogoneae. The phylogeny suggests that the tribe underwent a rapid radiation during its early history and that the monoecious Andropogoneae are polyphyletic. |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-82 | Sentence | denotes | Molecular evolution of the teosinte branched gene among maize and related grasses. |
| T2 | 83-222 | Sentence | denotes | Several authors have proposed that changes in a small number of regulatory genes may be sufficient for the evolution of novel morphologies. |
| T3 | 223-419 | Sentence | denotes | Recent analyses have indicated that teosinte branched1 (tb1), a putative bHLH transcription factor, played such a role during the morphological evolution of maize from its wild ancestor, teosinte. |
| T4 | 420-712 | Sentence | denotes | To address whether or not tb1 played a similar role during the evolution of the Andropogoneae, the tribe to which maize belongs, and to examine the rate and pattern of tb1 evolution within this tribe, we analyzed tb1-like sequences from 23 members of the Andropogoneae and five other grasses. |
| T5 | 713-836 | Sentence | denotes | Our analysis revealed that the TB1 protein evolves slowly within three conserved domains but rapidly outside these domains. |
| T6 | 837-959 | Sentence | denotes | The nonconserved regions of the gene are characterized by both a high nonsynonymous substitution rate and frequent indels. |
| T7 | 960-1171 | Sentence | denotes | The ratio of nonsynonymous substitutions per nonsynonymous site (d(N)) to synonymous substitutions per synonymous site (d(S)) was not significantly greater than 1.0, providing no evidence for positive selection. |
| T8 | 1172-1299 | Sentence | denotes | However, the d(N)/d(S) ratio varied significantly among lineages and was high compared with those of other plant nuclear genes. |
| T9 | 1300-1432 | Sentence | denotes | Variation in the d(N)/d(S) ratio among the Andropogoneae could be explained by unequal levels of purifying selection among lineages. |
| T10 | 1433-1610 | Sentence | denotes | Consistent with this interpretation, the rate of nonsynonymous substitution differed along several lineages, while the synonymous substitution rate did not differ significantly. |
| T11 | 1611-1842 | Sentence | denotes | Finally, using tb1, we examined phylogenetic relationships within the Andropogoneae. The phylogeny suggests that the tribe underwent a rapid radiation during its early history and that the monoecious Andropogoneae are polyphyletic. |
| T1 | 0-82 | Sentence | denotes | Molecular evolution of the teosinte branched gene among maize and related grasses. |
| T2 | 83-222 | Sentence | denotes | Several authors have proposed that changes in a small number of regulatory genes may be sufficient for the evolution of novel morphologies. |
| T3 | 223-419 | Sentence | denotes | Recent analyses have indicated that teosinte branched1 (tb1), a putative bHLH transcription factor, played such a role during the morphological evolution of maize from its wild ancestor, teosinte. |
| T4 | 420-712 | Sentence | denotes | To address whether or not tb1 played a similar role during the evolution of the Andropogoneae, the tribe to which maize belongs, and to examine the rate and pattern of tb1 evolution within this tribe, we analyzed tb1-like sequences from 23 members of the Andropogoneae and five other grasses. |
| T5 | 713-836 | Sentence | denotes | Our analysis revealed that the TB1 protein evolves slowly within three conserved domains but rapidly outside these domains. |
| T6 | 837-959 | Sentence | denotes | The nonconserved regions of the gene are characterized by both a high nonsynonymous substitution rate and frequent indels. |
| T7 | 960-1171 | Sentence | denotes | The ratio of nonsynonymous substitutions per nonsynonymous site (d(N)) to synonymous substitutions per synonymous site (d(S)) was not significantly greater than 1.0, providing no evidence for positive selection. |
| T8 | 1172-1299 | Sentence | denotes | However, the d(N)/d(S) ratio varied significantly among lineages and was high compared with those of other plant nuclear genes. |
| T9 | 1300-1432 | Sentence | denotes | Variation in the d(N)/d(S) ratio among the Andropogoneae could be explained by unequal levels of purifying selection among lineages. |
| T10 | 1433-1610 | Sentence | denotes | Consistent with this interpretation, the rate of nonsynonymous substitution differed along several lineages, while the synonymous substitution rate did not differ significantly. |
| T11 | 1611-1842 | Sentence | denotes | Finally, using tb1, we examined phylogenetic relationships within the Andropogoneae. The phylogeny suggests that the tribe underwent a rapid radiation during its early history and that the monoecious Andropogoneae are polyphyletic. |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-82 | Sentence | denotes | Molecular evolution of the teosinte branched gene among maize and related grasses. |
| T2 | 83-222 | Sentence | denotes | Several authors have proposed that changes in a small number of regulatory genes may be sufficient for the evolution of novel morphologies. |
| T3 | 223-419 | Sentence | denotes | Recent analyses have indicated that teosinte branched1 (tb1), a putative bHLH transcription factor, played such a role during the morphological evolution of maize from its wild ancestor, teosinte. |
| T4 | 420-712 | Sentence | denotes | To address whether or not tb1 played a similar role during the evolution of the Andropogoneae, the tribe to which maize belongs, and to examine the rate and pattern of tb1 evolution within this tribe, we analyzed tb1-like sequences from 23 members of the Andropogoneae and five other grasses. |
| T5 | 713-836 | Sentence | denotes | Our analysis revealed that the TB1 protein evolves slowly within three conserved domains but rapidly outside these domains. |
| T6 | 837-959 | Sentence | denotes | The nonconserved regions of the gene are characterized by both a high nonsynonymous substitution rate and frequent indels. |
| T7 | 960-1171 | Sentence | denotes | The ratio of nonsynonymous substitutions per nonsynonymous site (d(N)) to synonymous substitutions per synonymous site (d(S)) was not significantly greater than 1.0, providing no evidence for positive selection. |
| T8 | 1172-1299 | Sentence | denotes | However, the d(N)/d(S) ratio varied significantly among lineages and was high compared with those of other plant nuclear genes. |
| T9 | 1300-1432 | Sentence | denotes | Variation in the d(N)/d(S) ratio among the Andropogoneae could be explained by unequal levels of purifying selection among lineages. |
| T10 | 1433-1610 | Sentence | denotes | Consistent with this interpretation, the rate of nonsynonymous substitution differed along several lineages, while the synonymous substitution rate did not differ significantly. |
| T11 | 1611-1842 | Sentence | denotes | Finally, using tb1, we examined phylogenetic relationships within the Andropogoneae. The phylogeny suggests that the tribe underwent a rapid radiation during its early history and that the monoecious Andropogoneae are polyphyletic. |
| T1 | 0-82 | Sentence | denotes | Molecular evolution of the teosinte branched gene among maize and related grasses. |
| T2 | 83-222 | Sentence | denotes | Several authors have proposed that changes in a small number of regulatory genes may be sufficient for the evolution of novel morphologies. |
| T3 | 223-419 | Sentence | denotes | Recent analyses have indicated that teosinte branched1 (tb1), a putative bHLH transcription factor, played such a role during the morphological evolution of maize from its wild ancestor, teosinte. |
| T4 | 420-712 | Sentence | denotes | To address whether or not tb1 played a similar role during the evolution of the Andropogoneae, the tribe to which maize belongs, and to examine the rate and pattern of tb1 evolution within this tribe, we analyzed tb1-like sequences from 23 members of the Andropogoneae and five other grasses. |
| T5 | 713-836 | Sentence | denotes | Our analysis revealed that the TB1 protein evolves slowly within three conserved domains but rapidly outside these domains. |
| T6 | 837-959 | Sentence | denotes | The nonconserved regions of the gene are characterized by both a high nonsynonymous substitution rate and frequent indels. |
| T7 | 960-1171 | Sentence | denotes | The ratio of nonsynonymous substitutions per nonsynonymous site (d(N)) to synonymous substitutions per synonymous site (d(S)) was not significantly greater than 1.0, providing no evidence for positive selection. |
| T8 | 1172-1299 | Sentence | denotes | However, the d(N)/d(S) ratio varied significantly among lineages and was high compared with those of other plant nuclear genes. |
| T9 | 1300-1432 | Sentence | denotes | Variation in the d(N)/d(S) ratio among the Andropogoneae could be explained by unequal levels of purifying selection among lineages. |
| T10 | 1433-1610 | Sentence | denotes | Consistent with this interpretation, the rate of nonsynonymous substitution differed along several lineages, while the synonymous substitution rate did not differ significantly. |
| T11 | 1611-1842 | Sentence | denotes | Finally, using tb1, we examined phylogenetic relationships within the Andropogoneae. The phylogeny suggests that the tribe underwent a rapid radiation during its early history and that the monoecious Andropogoneae are polyphyletic. |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-82 | Sentence | denotes | Molecular evolution of the teosinte branched gene among maize and related grasses. |
| T2 | 83-222 | Sentence | denotes | Several authors have proposed that changes in a small number of regulatory genes may be sufficient for the evolution of novel morphologies. |
| T3 | 223-419 | Sentence | denotes | Recent analyses have indicated that teosinte branched1 (tb1), a putative bHLH transcription factor, played such a role during the morphological evolution of maize from its wild ancestor, teosinte. |
| T4 | 420-712 | Sentence | denotes | To address whether or not tb1 played a similar role during the evolution of the Andropogoneae, the tribe to which maize belongs, and to examine the rate and pattern of tb1 evolution within this tribe, we analyzed tb1-like sequences from 23 members of the Andropogoneae and five other grasses. |
| T5 | 713-836 | Sentence | denotes | Our analysis revealed that the TB1 protein evolves slowly within three conserved domains but rapidly outside these domains. |
| T6 | 837-959 | Sentence | denotes | The nonconserved regions of the gene are characterized by both a high nonsynonymous substitution rate and frequent indels. |
| T7 | 960-1171 | Sentence | denotes | The ratio of nonsynonymous substitutions per nonsynonymous site (d(N)) to synonymous substitutions per synonymous site (d(S)) was not significantly greater than 1.0, providing no evidence for positive selection. |
| T8 | 1172-1299 | Sentence | denotes | However, the d(N)/d(S) ratio varied significantly among lineages and was high compared with those of other plant nuclear genes. |
| T9 | 1300-1432 | Sentence | denotes | Variation in the d(N)/d(S) ratio among the Andropogoneae could be explained by unequal levels of purifying selection among lineages. |
| T10 | 1433-1610 | Sentence | denotes | Consistent with this interpretation, the rate of nonsynonymous substitution differed along several lineages, while the synonymous substitution rate did not differ significantly. |
| T11 | 1611-1842 | Sentence | denotes | Finally, using tb1, we examined phylogenetic relationships within the Andropogoneae. The phylogeny suggests that the tribe underwent a rapid radiation during its early history and that the monoecious Andropogoneae are polyphyletic. |
| T1 | 0-82 | Sentence | denotes | Molecular evolution of the teosinte branched gene among maize and related grasses. |
| T2 | 83-222 | Sentence | denotes | Several authors have proposed that changes in a small number of regulatory genes may be sufficient for the evolution of novel morphologies. |
| T3 | 223-419 | Sentence | denotes | Recent analyses have indicated that teosinte branched1 (tb1), a putative bHLH transcription factor, played such a role during the morphological evolution of maize from its wild ancestor, teosinte. |
| T4 | 420-712 | Sentence | denotes | To address whether or not tb1 played a similar role during the evolution of the Andropogoneae, the tribe to which maize belongs, and to examine the rate and pattern of tb1 evolution within this tribe, we analyzed tb1-like sequences from 23 members of the Andropogoneae and five other grasses. |
| T5 | 713-836 | Sentence | denotes | Our analysis revealed that the TB1 protein evolves slowly within three conserved domains but rapidly outside these domains. |
| T6 | 837-959 | Sentence | denotes | The nonconserved regions of the gene are characterized by both a high nonsynonymous substitution rate and frequent indels. |
| T7 | 960-1171 | Sentence | denotes | The ratio of nonsynonymous substitutions per nonsynonymous site (d(N)) to synonymous substitutions per synonymous site (d(S)) was not significantly greater than 1.0, providing no evidence for positive selection. |
| T8 | 1172-1299 | Sentence | denotes | However, the d(N)/d(S) ratio varied significantly among lineages and was high compared with those of other plant nuclear genes. |
| T9 | 1300-1432 | Sentence | denotes | Variation in the d(N)/d(S) ratio among the Andropogoneae could be explained by unequal levels of purifying selection among lineages. |
| T10 | 1433-1610 | Sentence | denotes | Consistent with this interpretation, the rate of nonsynonymous substitution differed along several lineages, while the synonymous substitution rate did not differ significantly. |
| T11 | 1611-1842 | Sentence | denotes | Finally, using tb1, we examined phylogenetic relationships within the Andropogoneae. The phylogeny suggests that the tribe underwent a rapid radiation during its early history and that the monoecious Andropogoneae are polyphyletic. |