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PubMed:11159919 JSONTXT

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GlyCosmos6-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 41-47 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T2 227-232 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T3 331-336 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T4 453-464 Body_part denotes fibroblasts http://purl.obolibrary.org/obo/CL_0000057
T5 466-479 Body_part denotes keratinocytes http://purl.obolibrary.org/obo/CL_0000312
T6 498-508 Body_part denotes leukocytes http://purl.obolibrary.org/obo/CL_0000738
T7 561-569 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T10 660-665 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T11 778-784 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479

Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 621-628 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose

NCBITAXON

Id Subject Object Predicate Lexical cue
T1 41-47 http://purl.bioontology.org/ontology/STY/T024 denotes tissue
T2 778-784 http://purl.bioontology.org/ontology/STY/T024 denotes tissue

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 621-628 Glycan_Motif denotes glucose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G15021LG

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-102 Sentence denotes Defect in N-glycosylation of proteins is tissue-dependent in congenital disorders of glycosylation Ia.
TextSentencer_T2 103-247 Sentence denotes The biochemical hallmark of Congenital Disorders of Glycosylation (CDG) including type Ia is a defective N-glycosylation of serum glycoproteins.
TextSentencer_T3 248-358 Sentence denotes Hypoglycosylated forms of alpha1-antitrypsin have been detected by Western blot in serum from CDG Ia patients.
TextSentencer_T4 359-509 Sentence denotes In contrast we were not able to detect hypoglycosylation in alpha1-antitrypsin synthesized by fibroblasts, keratinocytes, enterocytes, and leukocytes.
TextSentencer_T5 510-721 Sentence denotes Similarly no hypoglycosylation was detectable in a membrane-associated N-linked glycoprotein, the facilitative glucose transporter GLUT-1 and also in serum immunoglobulin G isolated from sera of CDG Ia patients.
TextSentencer_T6 722-795 Sentence denotes We conclude that the phenotypic expression of CDG Ia is tissue-dependent.
T1 0-102 Sentence denotes Defect in N-glycosylation of proteins is tissue-dependent in congenital disorders of glycosylation Ia.
T2 103-247 Sentence denotes The biochemical hallmark of Congenital Disorders of Glycosylation (CDG) including type Ia is a defective N-glycosylation of serum glycoproteins.
T3 248-358 Sentence denotes Hypoglycosylated forms of alpha1-antitrypsin have been detected by Western blot in serum from CDG Ia patients.
T4 359-509 Sentence denotes In contrast we were not able to detect hypoglycosylation in alpha1-antitrypsin synthesized by fibroblasts, keratinocytes, enterocytes, and leukocytes.
T5 510-721 Sentence denotes Similarly no hypoglycosylation was detectable in a membrane-associated N-linked glycoprotein, the facilitative glucose transporter GLUT-1 and also in serum immunoglobulin G isolated from sera of CDG Ia patients.
T6 722-795 Sentence denotes We conclude that the phenotypic expression of CDG Ia is tissue-dependent.
T1 0-102 Sentence denotes Defect in N-glycosylation of proteins is tissue-dependent in congenital disorders of glycosylation Ia.
T2 103-247 Sentence denotes The biochemical hallmark of Congenital Disorders of Glycosylation (CDG) including type Ia is a defective N-glycosylation of serum glycoproteins.
T3 248-358 Sentence denotes Hypoglycosylated forms of alpha1-antitrypsin have been detected by Western blot in serum from CDG Ia patients.
T4 359-509 Sentence denotes In contrast we were not able to detect hypoglycosylation in alpha1-antitrypsin synthesized by fibroblasts, keratinocytes, enterocytes, and leukocytes.
T5 510-721 Sentence denotes Similarly no hypoglycosylation was detectable in a membrane-associated N-linked glycoprotein, the facilitative glucose transporter GLUT-1 and also in serum immunoglobulin G isolated from sera of CDG Ia patients.
T6 722-795 Sentence denotes We conclude that the phenotypic expression of CDG Ia is tissue-dependent.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 621-628 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 61-98 Disease denotes congenital disorders of glycosylation http://purl.obolibrary.org/obo/MONDO_0015286
T2 131-168 Disease denotes Congenital Disorders of Glycosylation http://purl.obolibrary.org/obo/MONDO_0015286
T3 170-173 Disease denotes CDG http://purl.obolibrary.org/obo/MONDO_0015286
T4 342-348 Disease denotes CDG Ia http://purl.obolibrary.org/obo/MONDO_0008907
T5 705-711 Disease denotes CDG Ia http://purl.obolibrary.org/obo/MONDO_0008907
T6 768-774 Disease denotes CDG Ia http://purl.obolibrary.org/obo/MONDO_0008907

GlyCosmos6-CLO

Id Subject Object Predicate Lexical cue
T1 453-464 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblasts
T2 466-479 http://purl.obolibrary.org/obo/CL_0000312 denotes keratinocytes

GlycoBiology-GDGDB

Id Subject Object Predicate Lexical cue
_T1 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00348 denotes congenital disorders of glycosylation
_T2 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00360 denotes congenital disorders of glycosylation
_T3 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00367 denotes congenital disorders of glycosylation
_T4 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00365 denotes congenital disorders of glycosylation
_T5 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00364 denotes congenital disorders of glycosylation
_T6 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00627 denotes congenital disorders of glycosylation
_T7 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00363 denotes congenital disorders of glycosylation
_T8 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00362 denotes congenital disorders of glycosylation
_T9 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00361 denotes congenital disorders of glycosylation
_T10 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00344 denotes congenital disorders of glycosylation
_T11 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00359 denotes congenital disorders of glycosylation
_T12 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00345 denotes congenital disorders of glycosylation
_T13 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00625 denotes congenital disorders of glycosylation
_T14 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00346 denotes congenital disorders of glycosylation
_T15 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00624 denotes congenital disorders of glycosylation
_T16 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00354 denotes congenital disorders of glycosylation
_T17 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00623 denotes congenital disorders of glycosylation
_T18 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00626 denotes congenital disorders of glycosylation
_T19 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00622 denotes congenital disorders of glycosylation
_T20 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00349 denotes congenital disorders of glycosylation
_T21 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00621 denotes congenital disorders of glycosylation
_T22 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00350 denotes congenital disorders of glycosylation
_T23 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00620 denotes congenital disorders of glycosylation
_T24 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00351 denotes congenital disorders of glycosylation
_T25 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00356 denotes congenital disorders of glycosylation
_T26 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00352 denotes congenital disorders of glycosylation
_T27 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00355 denotes congenital disorders of glycosylation
_T28 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00353 denotes congenital disorders of glycosylation
_T29 61-98 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00347 denotes congenital disorders of glycosylation
_T30 61-101 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00358 denotes congenital disorders of glycosylation Ia
_T31 61-101 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00343 denotes congenital disorders of glycosylation Ia
_T32 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00625 denotes Congenital Disorders of Glycosylation
_T33 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00351 denotes Congenital Disorders of Glycosylation
_T34 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00356 denotes Congenital Disorders of Glycosylation
_T35 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00350 denotes Congenital Disorders of Glycosylation
_T36 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00620 denotes Congenital Disorders of Glycosylation
_T37 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00349 denotes Congenital Disorders of Glycosylation
_T38 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00621 denotes Congenital Disorders of Glycosylation
_T39 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00348 denotes Congenital Disorders of Glycosylation
_T40 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00622 denotes Congenital Disorders of Glycosylation
_T41 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00347 denotes Congenital Disorders of Glycosylation
_T42 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00623 denotes Congenital Disorders of Glycosylation
_T43 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00346 denotes Congenital Disorders of Glycosylation
_T44 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00624 denotes Congenital Disorders of Glycosylation
_T45 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00345 denotes Congenital Disorders of Glycosylation
_T46 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00355 denotes Congenital Disorders of Glycosylation
_T47 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00353 denotes Congenital Disorders of Glycosylation
_T48 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00358 denotes Congenital Disorders of Glycosylation
_T49 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00344 denotes Congenital Disorders of Glycosylation
_T50 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00359 denotes Congenital Disorders of Glycosylation
_T51 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00343 denotes Congenital Disorders of Glycosylation
_T52 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00361 denotes Congenital Disorders of Glycosylation
_T53 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00352 denotes Congenital Disorders of Glycosylation
_T54 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00362 denotes Congenital Disorders of Glycosylation
_T55 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00626 denotes Congenital Disorders of Glycosylation
_T56 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00363 denotes Congenital Disorders of Glycosylation
_T57 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00627 denotes Congenital Disorders of Glycosylation
_T58 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00364 denotes Congenital Disorders of Glycosylation
_T59 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00354 denotes Congenital Disorders of Glycosylation
_T60 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00365 denotes Congenital Disorders of Glycosylation
_T61 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00367 denotes Congenital Disorders of Glycosylation
_T62 131-168 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00360 denotes Congenital Disorders of Glycosylation
_T63 342-348 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00343 denotes CDG Ia
_T64 342-348 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00358 denotes CDG Ia
_T65 705-711 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00358 denotes CDG Ia
_T66 705-711 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00343 denotes CDG Ia
_T67 768-774 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00358 denotes CDG Ia
_T68 768-774 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00343 denotes CDG Ia
_T69 768-777 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00624 denotes CDG Ia is

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 29-37 FMAID:165447 denotes proteins
_T2 29-37 FMAID:67257 denotes proteins
_T3 41-47 FMAID:256050 denotes tissue
_T4 227-232 FMAID:167330 denotes serum
_T5 233-246 FMAID:167256 denotes glycoproteins
_T6 233-246 FMAID:62925 denotes glycoproteins
_T7 331-336 FMAID:167330 denotes serum
_T8 453-464 FMAID:162340 denotes fibroblasts
_T9 453-464 FMAID:63877 denotes fibroblasts
_T10 466-479 FMAID:170966 denotes keratinocytes
_T11 481-492 FMAID:62122 denotes enterocytes
_T12 481-492 FMAID:166407 denotes enterocytes
_T13 498-508 FMAID:167148 denotes leukocytes
_T14 498-508 FMAID:62852 denotes leukocytes
_T15 590-602 FMAID:167256 denotes glycoprotein
_T16 590-602 FMAID:62925 denotes glycoprotein
_T17 621-628 FMAID:82743 denotes glucose
_T18 621-628 FMAID:196732 denotes glucose
_T19 660-665 FMAID:167330 denotes serum
_T20 666-680 FMAID:62871 denotes immunoglobulin
_T21 666-680 FMAID:167177 denotes immunoglobulin
_T22 666-682 FMAID:167187 denotes immunoglobulin G
_T23 666-682 FMAID:167178 denotes immunoglobulin G
_T24 666-682 FMAID:62875 denotes immunoglobulin G
_T25 666-682 FMAID:167181 denotes immunoglobulin G
_T26 666-682 FMAID:167183 denotes immunoglobulin G
_T27 666-682 FMAID:62874 denotes immunoglobulin G
_T28 666-682 FMAID:62872 denotes immunoglobulin G
_T29 666-682 FMAID:62873 denotes immunoglobulin G
_T30 666-682 FMAID:62876 denotes immunoglobulin G
_T31 666-682 FMAID:167185 denotes immunoglobulin G
_T32 778-784 FMAID:256050 denotes tissue

uniprot-human

Id Subject Object Predicate Lexical cue
T1 641-647 http://www.uniprot.org/uniprot/P11166 denotes GLUT-1

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 641-647 http://www.uniprot.org/uniprot/P17809 denotes GLUT-1

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 41-47 http://purl.bioontology.org/ontology/STY/T024 denotes tissue
T2 778-784 http://purl.bioontology.org/ontology/STY/T024 denotes tissue

GO-BP

Id Subject Object Predicate Lexical cue
T1 10-37 http://purl.obolibrary.org/obo/GO_0006487 denotes N-glycosylation of proteins
T2 12-25 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T3 85-98 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T4 155-168 http://purl.obolibrary.org/obo/GO_0070085 denotes Glycosylation
T5 12-37 http://purl.obolibrary.org/obo/GO_0006486 denotes glycosylation of proteins
T6 621-640 http://purl.obolibrary.org/obo/GO_0015758 denotes glucose transporter
T7 629-640 http://purl.obolibrary.org/obo/GO_0006810 denotes transporter
T8 697-701 http://purl.obolibrary.org/obo/GO_0004617 denotes sera

GO-MF

Id Subject Object Predicate Lexical cue
T1 666-680 http://purl.obolibrary.org/obo/GO_0003823 denotes immunoglobulin

GO-CC

Id Subject Object Predicate Lexical cue
T1 561-569 http://purl.obolibrary.org/obo/GO_0016020 denotes membrane

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 41-47 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
T2 778-784 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
T3 227-232 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum
T4 331-336 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum
T5 660-665 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum

bionlp-st-epi-2011-training

Id Subject Object Predicate Lexical cue
T1 274-292 Protein denotes alpha1-antitrypsin
T2 419-437 Protein denotes alpha1-antitrypsin
T3 641-647 Protein denotes GLUT-1

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 29-37 http://edamontology.org/topic_0078 denotes proteins
T2 743-753 http://edamontology.org/topic_0625 denotes phenotypic

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 29-37 http://edamontology.org/data_1467 denotes proteins
T2 29-37 http://edamontology.org/format_1208 denotes proteins
T3 303-311 http://edamontology.org/operation_2423 denotes detected
T4 391-397 http://edamontology.org/operation_2423 denotes detect
T5 545-555 http://edamontology.org/operation_2423 denotes detectable
T6 743-753 http://edamontology.org/data_3275 denotes phenotypic

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 227-232 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum
PD-UBERON-AE-B_T2 331-336 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum
PD-UBERON-AE-B_T3 660-665 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum
PD-UBERON-AE-B_T4 41-47 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T5 778-784 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue