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PubMed:11133985 JSONTXT

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Oryza-OGER

Id Subject Object Predicate Lexical cue
T1 2-6 http://id.nlm.nih.gov/mesh/D012275 denotes rice
T2 2-6 http://purl.bioontology.org/ontology/RXNORM/1311040 denotes rice
T3 2-6 http://www.ncbi.nlm.nih.gov/taxonomy/4530 denotes rice
T4 65-68 http://purl.obolibrary.org/obo/PR_Q9NZC7 denotes for
T5 65-68 http://purl.obolibrary.org/obo/PR_000001036 denotes for
T6 102-109 http://purl.obolibrary.org/obo/GO_0051235 denotes storage
T7 102-117 http://purl.obolibrary.org/obo/GO_0045735 denotes storage protein
T8 102-117 http://purl.obolibrary.org/obo/GO_0005187 denotes storage protein
T9 110-117 http://purl.obolibrary.org/obo/CHEBI_11122 denotes protein
T10 110-117 http://purl.obolibrary.org/obo/SO_0000104 denotes protein
T11 110-117 http://purl.obolibrary.org/obo/PR_000000001 denotes protein
T12 110-117 http://purl.obolibrary.org/obo/CHEBI_16541 denotes protein
T13 110-117 http://purl.obolibrary.org/obo/GO_0003675 denotes protein
T14 110-117 http://purl.obolibrary.org/obo/CHEBI_36080 denotes protein
T15 132-136 http://purl.obolibrary.org/obo/PR_Q9M1H3 denotes GCN4
T16 132-136 http://purl.obolibrary.org/obo/PR_P03069 denotes GCN4
T17 137-142 http://purl.obolibrary.org/obo/SO_0100017 denotes motif
T18 137-142 http://purl.obolibrary.org/obo/SO_0001067 denotes motif
T19 148-152 http://purl.obolibrary.org/obo/PR_Q9M1H3 denotes GCN4
T20 148-152 http://purl.obolibrary.org/obo/PR_P03069 denotes GCN4
T21 153-158 http://purl.obolibrary.org/obo/SO_0100017 denotes motif
T22 153-158 http://purl.obolibrary.org/obo/SO_0001067 denotes motif
T23 162-165 http://purl.obolibrary.org/obo/PR_Q9PW70 denotes cis
T24 162-165 http://purl.obolibrary.org/obo/PR_000005503 denotes cis
T25 162-165 http://www.uniprot.org/uniprot/Q9NSE2 denotes cis
T26 162-165 http://purl.obolibrary.org/obo/PR_Q62225 denotes cis
T27 162-165 http://www.uniprot.org/uniprot/Q62225 denotes cis
T28 162-165 http://purl.obolibrary.org/obo/UBERON_0035925 denotes cis
T29 162-165 http://www.uniprot.org/uniprot/O70512 denotes cis
T30 162-165 http://www.uniprot.org/uniprot/Q2HJ53 denotes cis
T31 162-165 http://www.uniprot.org/uniprot/Q9PW70 denotes cis
T32 166-173 http://purl.obolibrary.org/obo/UBERON_0000062 denotes element
T33 166-173 http://purl.obolibrary.org/obo/CHEBI_33250 denotes element
T34 189-198 http://purl.obolibrary.org/obo/SO_0000856 denotes conserved
T35 219-225 http://id.nlm.nih.gov/mesh/D002523 denotes cereal
T36 231-238 http://purl.obolibrary.org/obo/GO_0051235 denotes storage
T37 231-246 http://purl.obolibrary.org/obo/GO_0045735 denotes storage protein
T38 231-246 http://purl.obolibrary.org/obo/GO_0005187 denotes storage protein
T39 239-246 http://purl.obolibrary.org/obo/CHEBI_11122 denotes protein
T40 239-246 http://purl.obolibrary.org/obo/SO_0000104 denotes protein
T41 239-246 http://purl.obolibrary.org/obo/PR_000000001 denotes protein
T42 239-246 http://purl.obolibrary.org/obo/CHEBI_16541 denotes protein
T43 239-246 http://purl.obolibrary.org/obo/GO_0003675 denotes protein
T44 239-246 http://purl.obolibrary.org/obo/CHEBI_36080 denotes protein
T45 270-274 http://purl.obolibrary.org/obo/UBERON_2002175 denotes role
T46 270-274 http://purl.obolibrary.org/obo/CHEBI_50906 denotes role
T47 321-325 http://purl.obolibrary.org/obo/PR_000024065 denotes This
T48 321-325 http://purl.obolibrary.org/obo/PR_O32583 denotes This
T49 326-331 http://purl.obolibrary.org/obo/SO_0100017 denotes motif
T50 326-331 http://purl.obolibrary.org/obo/SO_0001067 denotes motif
T51 351-355 http://purl.obolibrary.org/obo/SO_0000409 denotes site
T52 351-355 http://purl.obolibrary.org/obo/SO_0000839 denotes site
T53 351-355 http://purl.obolibrary.org/obo/SO_0000408 denotes site
T54 356-359 http://purl.obolibrary.org/obo/PR_Q9NZC7 denotes for
T55 356-359 http://purl.obolibrary.org/obo/PR_000001036 denotes for
T56 368-375 http://purl.bioontology.org/ontology/RXNORM/6308 denotes leucine
T57 368-375 http://purl.obolibrary.org/obo/CHEBI_25017 denotes leucine
T58 368-375 http://id.nlm.nih.gov/mesh/D007930 denotes leucine
T59 368-375 http://purl.obolibrary.org/obo/SO_0001437 denotes leucine
T60 368-375 http://id.nlm.nih.gov/mesh/D007930 denotes leucine
T61 368-375 http://purl.obolibrary.org/obo/CHEBI_15603 denotes leucine
T62 426-431 http://purl.obolibrary.org/obo/CHEBI_24433 denotes group
T63 435-440 http://www.ncbi.nlm.nih.gov/taxonomy/4577 denotes maize
T64 435-440 http://id.nlm.nih.gov/mesh/D003313 denotes maize
T65 441-447 FLO1 denotes Opaque
T66 448-449 AMT1;3 denotes 2
T67 452-453 AMT1;3 denotes 2
T68 460-468 http://id.nlm.nih.gov/mesh/D011506 denotes proteins
T69 460-468 http://purl.obolibrary.org/obo/CHEBI_36080 denotes proteins
T70 491-498 http://purl.bioontology.org/ontology/RXNORM/6308 denotes leucine
T71 491-498 http://purl.obolibrary.org/obo/CHEBI_25017 denotes leucine
T72 491-498 http://id.nlm.nih.gov/mesh/D007930 denotes leucine
T73 491-498 http://purl.obolibrary.org/obo/SO_0001437 denotes leucine
T74 491-498 http://id.nlm.nih.gov/mesh/D007930 denotes leucine
T75 491-498 http://purl.obolibrary.org/obo/CHEBI_15603 denotes leucine
T76 506-510 http://id.nlm.nih.gov/mesh/D018076 denotes cDNA
T77 506-510 http://purl.obolibrary.org/obo/SO_0000756 denotes cDNA
T78 566-570 http://id.nlm.nih.gov/mesh/D012275 denotes rice
T79 566-570 http://purl.bioontology.org/ontology/RXNORM/1311040 denotes rice
T80 566-570 http://www.ncbi.nlm.nih.gov/taxonomy/4530 denotes rice
T81 576-580 http://id.nlm.nih.gov/mesh/D018076 denotes cDNA
T82 576-580 http://purl.obolibrary.org/obo/SO_0000756 denotes cDNA
T83 594-603 http://purl.obolibrary.org/obo/SO_0000732 denotes predicted
T84 594-608 http://purl.obolibrary.org/obo/SO_0000996 denotes predicted gene
T85 604-608 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T86 618-621 http://purl.obolibrary.org/obo/PR_P61517 denotes can
T87 618-621 http://purl.obolibrary.org/obo/CHEBI_29320 denotes can
T88 618-621 http://purl.obolibrary.org/obo/CHEBI_91238 denotes can
T89 618-621 http://purl.obolibrary.org/obo/PR_000034449 denotes can
T90 618-621 http://purl.obolibrary.org/obo/PR_F4IZC5 denotes can
T91 618-621 http://id.nlm.nih.gov/mesh/C567382 denotes can
T92 618-621 http://purl.obolibrary.org/obo/PR_000011515 denotes can
T93 618-621 http://purl.obolibrary.org/obo/PR_P35658 denotes can
T94 664-669 http://purl.obolibrary.org/obo/CHEBI_46882 denotes amino
T95 664-674 http://purl.obolibrary.org/obo/SO_0001237 denotes amino acid
T96 664-674 http://purl.obolibrary.org/obo/CHEBI_33709 denotes amino acid
T97 664-674 http://purl.obolibrary.org/obo/CHEBI_33704 denotes amino acid
T98 670-674 http://purl.obolibrary.org/obo/CHEBI_37527 denotes acid
T99 695-698 http://purl.obolibrary.org/obo/UBERON_0014899 denotes all
T100 695-698 http://id.nlm.nih.gov/mesh/D054198 denotes all
T101 695-698 http://purl.obolibrary.org/obo/CHEBI_37690 denotes all
T102 709-717 http://id.nlm.nih.gov/mesh/D011506 denotes proteins
T103 709-717 http://purl.obolibrary.org/obo/CHEBI_36080 denotes proteins
T104 718-721 http://purl.obolibrary.org/obo/SO_0001180 denotes are
T105 718-721 http://purl.obolibrary.org/obo/SO_0001853 denotes are
T106 748-752 http://purl.obolibrary.org/obo/PR_Q9M1H3 denotes GCN4
T107 748-752 http://purl.obolibrary.org/obo/PR_P03069 denotes GCN4
T108 753-758 http://purl.obolibrary.org/obo/SO_0100017 denotes motif
T109 753-758 http://purl.obolibrary.org/obo/SO_0001067 denotes motif
T110 812-816 http://purl.obolibrary.org/obo/PR_P24186 denotes fold
T111 812-816 http://purl.obolibrary.org/obo/PR_Q2FZJ6 denotes fold
T112 812-816 http://purl.obolibrary.org/obo/PR_000022679 denotes fold
T113 812-816 http://purl.obolibrary.org/obo/PR_A5I112 denotes fold
T114 858-862 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T115 879-887 http://purl.obolibrary.org/obo/SO_0000167 denotes promoter
T116 894-898 http://www.uniprot.org/uniprot/A7MBU6 denotes to a
T117 915-919 http://purl.obolibrary.org/obo/PR_Q9M1H3 denotes GCN4
T118 915-919 http://purl.obolibrary.org/obo/PR_P03069 denotes GCN4
T119 920-925 http://purl.obolibrary.org/obo/SO_0100017 denotes motif
T120 920-925 http://purl.obolibrary.org/obo/SO_0001067 denotes motif
T121 927-931 http://purl.obolibrary.org/obo/SO_0001743 denotes Loss
T122 944-947 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T123 944-947 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T124 948-952 http://purl.obolibrary.org/obo/SO_0001742 denotes gain
T125 987-992 http://id.nlm.nih.gov/mesh/D015003 denotes yeast
T126 987-992 http://purl.bioontology.org/ontology/RXNORM/214355 denotes yeast
T127 993-996 http://purl.obolibrary.org/obo/CHEBI_28260 denotes GAL
T128 993-996 http://purl.obolibrary.org/obo/PR_P47212 denotes GAL
T129 993-996 http://purl.obolibrary.org/obo/PR_000007806 denotes GAL
T130 993-996 http://purl.obolibrary.org/obo/PR_E7EZ53 denotes GAL
T131 993-996 http://purl.obolibrary.org/obo/PR_Q8N6F7 denotes GAL
T132 993-996 http://purl.obolibrary.org/obo/PR_P10683 denotes GAL
T133 993-996 http://purl.obolibrary.org/obo/PR_000007889 denotes GAL
T134 993-996 http://purl.obolibrary.org/obo/PR_P22466 denotes GAL
T135 993-997 http://www.uniprot.org/uniprot/P38552 denotes GAL4
T136 993-997 http://purl.obolibrary.org/obo/CHEBI_60188 denotes GAL4
T137 993-997 http://purl.obolibrary.org/obo/CHEBI_62999 denotes GAL4
T138 993-997 http://www.uniprot.org/uniprot/Q3T0D6 denotes GAL4
T139 993-997 http://www.uniprot.org/uniprot/Q29058 denotes GAL4
T140 993-997 http://purl.obolibrary.org/obo/PR_Q6GXJ1 denotes GAL4
T141 993-997 http://purl.obolibrary.org/obo/PR_000009773 denotes GAL4
T142 993-997 http://www.uniprot.org/uniprot/Q8K419 denotes GAL4
T143 993-997 http://www.uniprot.org/uniprot/P56470 denotes GAL4
T144 993-997 http://www.uniprot.org/uniprot/Q6GXJ1 denotes GAL4
T145 993-997 http://www.uniprot.org/uniprot/Q6QLR3 denotes GAL4
T146 993-997 http://purl.obolibrary.org/obo/PR_P04386 denotes GAL4
T147 998-1001 http://id.nlm.nih.gov/mesh/D004247 denotes DNA
T148 998-1001 http://purl.obolibrary.org/obo/SO_0000352 denotes DNA
T149 998-1001 http://purl.obolibrary.org/obo/GO_0005574 denotes DNA
T150 998-1001 http://purl.obolibrary.org/obo/CHEBI_16991 denotes DNA
T151 998-1009 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T152 1002-1009 http://purl.obolibrary.org/obo/SO_0100018 denotes binding
T153 1002-1009 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T154 1002-1009 http://purl.obolibrary.org/obo/SO_0001091 denotes binding
T155 1010-1016 http://purl.obolibrary.org/obo/SO_0000417 denotes domain
T156 1035-1042 http://purl.obolibrary.org/obo/SO_0001439 denotes proline
T157 1035-1042 http://id.nlm.nih.gov/mesh/D011392 denotes proline
T158 1035-1042 http://purl.bioontology.org/ontology/RXNORM/8737 denotes proline
T159 1035-1042 http://purl.obolibrary.org/obo/CHEBI_26271 denotes proline
T160 1035-1042 http://id.nlm.nih.gov/mesh/D011392 denotes proline
T161 1035-1042 http://purl.obolibrary.org/obo/CHEBI_17203 denotes proline
T162 1043-1047 http://purl.obolibrary.org/obo/PR_Q9V3C5 denotes rich
T163 1059-1065 http://purl.obolibrary.org/obo/SO_0000417 denotes domain
T164 1070-1075 http://purl.obolibrary.org/obo/CHEBI_46882 denotes amino
T165 1070-1081 http://purl.bioontology.org/ontology/RXNORM/1873122 denotes amino acids
T166 1070-1081 http://id.nlm.nih.gov/mesh/D000596 denotes amino acids
T167 1070-1081 http://id.nlm.nih.gov/mesh/D000596 denotes amino acids
T168 1070-1081 http://purl.obolibrary.org/obo/CHEBI_33709 denotes amino acids
T169 1070-1081 http://purl.obolibrary.org/obo/CHEBI_33704 denotes amino acids
T170 1076-1081 http://id.nlm.nih.gov/mesh/D000143 denotes acids
T171 1076-1081 http://purl.obolibrary.org/obo/CHEBI_37527 denotes acids
T172 1076-1081 http://id.nlm.nih.gov/mesh/D000143 denotes acids
T173 1108-1111 http://purl.obolibrary.org/obo/PR_Q9NZC7 denotes for
T174 1108-1111 http://purl.obolibrary.org/obo/PR_000001036 denotes for
T175 1112-1127 http://purl.obolibrary.org/obo/GO_2000144 denotes transactivation
T176 1140-1147 http://purl.obolibrary.org/obo/CHEBI_11122 denotes protein
T177 1140-1147 http://purl.obolibrary.org/obo/SO_0000104 denotes protein
T178 1140-1147 http://purl.obolibrary.org/obo/PR_000000001 denotes protein
T179 1140-1147 http://purl.obolibrary.org/obo/CHEBI_16541 denotes protein
T180 1140-1147 http://purl.obolibrary.org/obo/GO_0003675 denotes protein
T181 1140-1147 http://purl.obolibrary.org/obo/CHEBI_36080 denotes protein
T182 1210-1215 http://www.ncbi.nlm.nih.gov/taxonomy/32644 denotes other
T183 1230-1238 http://id.nlm.nih.gov/mesh/D011506 denotes proteins
T184 1230-1238 http://purl.obolibrary.org/obo/CHEBI_36080 denotes proteins
T185 1247-1251 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T186 1247-1262 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T187 1326-1333 http://purl.obolibrary.org/obo/GO_0051235 denotes storage
T188 1326-1341 http://purl.obolibrary.org/obo/GO_0045735 denotes storage protein
T189 1326-1341 http://purl.obolibrary.org/obo/GO_0005187 denotes storage protein
T190 1334-1341 http://purl.obolibrary.org/obo/CHEBI_11122 denotes protein
T191 1334-1341 http://purl.obolibrary.org/obo/SO_0000104 denotes protein
T192 1334-1341 http://purl.obolibrary.org/obo/PR_000000001 denotes protein
T193 1334-1341 http://purl.obolibrary.org/obo/CHEBI_16541 denotes protein
T194 1334-1341 http://purl.obolibrary.org/obo/GO_0003675 denotes protein
T195 1334-1341 http://purl.obolibrary.org/obo/CHEBI_36080 denotes protein
T196 1365-1373 http://purl.obolibrary.org/obo/SO_0000167 denotes promoter
T197 1374-1377 http://purl.obolibrary.org/obo/PR_000017371 denotes was
T198 1374-1377 http://purl.obolibrary.org/obo/PR_P42768 denotes was
T199 1374-1377 http://purl.obolibrary.org/obo/PR_P70315 denotes was
T200 1374-1377 http://id.nlm.nih.gov/mesh/D014923 denotes was
T201 1409-1413 http://purl.obolibrary.org/obo/PR_000022207 denotes beta
T202 1409-1413 http://purl.obolibrary.org/obo/PR_P17444 denotes beta
T203 1409-1413 http://purl.obolibrary.org/obo/CHEBI_30225 denotes beta
T204 1409-1413 http://purl.obolibrary.org/obo/CHEBI_10545 denotes beta
T205 1409-1413 http://web.expasy.org/cellosaurus/CVCL_R799 denotes beta
T206 1409-1413 http://purl.obolibrary.org/obo/PR_Q2FV11 denotes beta
T207 1409-1427 http://www.uniprot.org/uniprot/P08236 denotes beta-glucuronidase
T208 1409-1427 http://www.uniprot.org/uniprot/O18835 denotes beta-glucuronidase
T209 1409-1427 http://www.uniprot.org/uniprot/O77695 denotes beta-glucuronidase
T210 1409-1427 http://www.uniprot.org/uniprot/T2KN75 denotes beta-glucuronidase
T211 1409-1427 http://www.uniprot.org/uniprot/P12265 denotes beta-glucuronidase
T212 1409-1427 http://www.uniprot.org/uniprot/Q4FAT7 denotes beta-glucuronidase
T213 1409-1427 http://www.uniprot.org/uniprot/P05804 denotes beta-glucuronidase
T214 1409-1427 http://www.uniprot.org/uniprot/O97524 denotes beta-glucuronidase
T215 1409-1427 http://www.uniprot.org/uniprot/Q7SFB0 denotes beta-glucuronidase
T216 1409-1427 http://www.uniprot.org/uniprot/P06760 denotes beta-glucuronidase
T217 1409-1427 http://id.nlm.nih.gov/mesh/D005966 denotes beta-glucuronidase
T218 1409-1427 http://purl.obolibrary.org/obo/PR_000008358 denotes beta-glucuronidase
T219 1409-1427 http://www.uniprot.org/uniprot/Q5R5N6 denotes beta-glucuronidase
T220 1409-1427 http://www.uniprot.org/uniprot/A2QEQ6 denotes beta-glucuronidase
T221 1414-1427 http://id.nlm.nih.gov/mesh/D005966 denotes glucuronidase
T222 1437-1441 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T223 1442-1445 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T224 1442-1445 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T225 1459-1463 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T226 1464-1467 http://purl.obolibrary.org/obo/PR_000017371 denotes was
T227 1464-1467 http://purl.obolibrary.org/obo/PR_P42768 denotes was
T228 1464-1467 http://purl.obolibrary.org/obo/PR_P70315 denotes was
T229 1464-1467 http://id.nlm.nih.gov/mesh/D014923 denotes was
T230 1484-1488 http://id.nlm.nih.gov/mesh/D012275 denotes rice
T231 1484-1488 http://purl.bioontology.org/ontology/RXNORM/1311040 denotes rice
T232 1484-1488 http://www.ncbi.nlm.nih.gov/taxonomy/4530 denotes rice
T233 1494-1498 http://purl.obolibrary.org/obo/PR_000022207 denotes beta
T234 1494-1498 http://purl.obolibrary.org/obo/PR_P17444 denotes beta
T235 1494-1498 http://purl.obolibrary.org/obo/CHEBI_30225 denotes beta
T236 1494-1498 http://purl.obolibrary.org/obo/CHEBI_10545 denotes beta
T237 1494-1498 http://web.expasy.org/cellosaurus/CVCL_R799 denotes beta
T238 1494-1498 http://purl.obolibrary.org/obo/PR_Q2FV11 denotes beta
T239 1494-1512 http://www.uniprot.org/uniprot/P08236 denotes beta-glucuronidase
T240 1494-1512 http://www.uniprot.org/uniprot/O18835 denotes beta-glucuronidase
T241 1494-1512 http://www.uniprot.org/uniprot/O77695 denotes beta-glucuronidase
T242 1494-1512 http://www.uniprot.org/uniprot/T2KN75 denotes beta-glucuronidase
T243 1494-1512 http://www.uniprot.org/uniprot/P12265 denotes beta-glucuronidase
T244 1494-1512 http://www.uniprot.org/uniprot/Q4FAT7 denotes beta-glucuronidase
T245 1494-1512 http://www.uniprot.org/uniprot/P05804 denotes beta-glucuronidase
T246 1494-1512 http://www.uniprot.org/uniprot/O97524 denotes beta-glucuronidase
T247 1494-1512 http://www.uniprot.org/uniprot/Q7SFB0 denotes beta-glucuronidase
T248 1494-1512 http://www.uniprot.org/uniprot/P06760 denotes beta-glucuronidase
T249 1494-1512 http://id.nlm.nih.gov/mesh/D005966 denotes beta-glucuronidase
T250 1494-1512 http://purl.obolibrary.org/obo/PR_000008358 denotes beta-glucuronidase
T251 1494-1512 http://www.uniprot.org/uniprot/Q5R5N6 denotes beta-glucuronidase
T252 1494-1512 http://www.uniprot.org/uniprot/A2QEQ6 denotes beta-glucuronidase
T253 1499-1512 http://id.nlm.nih.gov/mesh/D005966 denotes glucuronidase
T254 1513-1517 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T255 1547-1555 http://id.nlm.nih.gov/mesh/C000624173 denotes aleurone
T256 1556-1559 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T257 1556-1559 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T258 1572-1577 http://purl.obolibrary.org/obo/UBERON_0022303 denotes layer
T259 1572-1577 http://purl.obolibrary.org/obo/UBERON_0000119 denotes layer
T260 1695-1699 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T261 1700-1703 http://web.expasy.org/cellosaurus/CVCL_E773 denotes may
T262 1747-1754 http://purl.obolibrary.org/obo/GO_0051235 denotes storage
T263 1747-1762 http://purl.obolibrary.org/obo/GO_0045735 denotes storage protein
T264 1747-1762 http://purl.obolibrary.org/obo/GO_0005187 denotes storage protein
T265 1755-1762 http://purl.obolibrary.org/obo/CHEBI_11122 denotes protein
T266 1755-1762 http://purl.obolibrary.org/obo/SO_0000104 denotes protein
T267 1755-1762 http://purl.obolibrary.org/obo/PR_000000001 denotes protein
T268 1755-1762 http://purl.obolibrary.org/obo/CHEBI_16541 denotes protein
T269 1755-1762 http://purl.obolibrary.org/obo/GO_0003675 denotes protein
T270 1755-1762 http://purl.obolibrary.org/obo/CHEBI_36080 denotes protein

pqqtest_sentence

Id Subject Object Predicate Lexical cue
M_0 1718-1739 cand:PO:0000199-cellular endosperm denotes endosperm specificity
M_1 1718-1739 cand:PO:0006017-helobial endosperm denotes endosperm specificity
M_2 1718-1739 cand:PO:0006220-central endosperm denotes endosperm specificity
M_3 1718-1739 cand:funRiceGene:234-endosperm development denotes endosperm specificity
M_4 1718-1739 cand:TO:0000587-endosperm quality denotes endosperm specificity
M_5 1718-1739 cand:WTO:0000219-endosperm texture denotes endosperm specificity
M_6 1718-1739 cand:PO:0005415-endosperm parenchyma denotes endosperm specificity
M_7 1718-1739 cand:TO:0000021-copper sensitivity denotes endosperm specificity
M_8 1718-1739 cand:TO:0000487-endosperm color denotes endosperm specificity
M_9 290-319 cand:funRiceGene:336-homeobox gene denotes endosperm-specific expression
M_10 290-319 cand:funRiceGene:16-MYB transcriptional activator denotes endosperm-specific expression
M_11 290-319 cand:funRiceGene:32-transcription regulator denotes endosperm-specific expression
M_12 290-319 cand:PO:0000199-cellular endosperm denotes endosperm-specific expression
M_13 290-319 cand:PO:0000038-primary endosperm cell denotes endosperm-specific expression
M_14 290-319 cand:funRiceGene:216-transcriptional regulator denotes endosperm-specific expression
M_15 290-319 cand:PO:0007633-endosperm development stage denotes endosperm-specific expression
M_16 290-319 cand:funRiceGene:36-ENDOSPERMLESS 1 denotes endosperm-specific expression
M_17 290-319 cand:PO:0006022-bundle sheath extension denotes endosperm-specific expression
M_18 290-319 cand:TO:0000231-endospermless denotes endosperm-specific expression
M_19 290-319 cand:funRiceGene:341-endosperm development denotes endosperm-specific expression
M_20 1688-1699 GeneID:NA denotes RISBZ1 gene
M_21 148-158 GeneID:NA denotes GCN4 motif
T50383 998-1016 xzyao:8775 denotes DNA binding domain
T1530 18-43 funRiceGene:470, xzyao:11182 denotes transcriptional activator
T70983 1662-1687 funRiceGene:470, xzyao:11182 denotes transcriptional activator
T54897 102-117 xzyao:25000 denotes storage protein
T47020 231-246 xzyao:25000 denotes storage protein
T63638 1326-1341 xzyao:25000 denotes storage protein
T626 1747-1762 xzyao:25000 denotes storage protein
T14799 1050-1065 xzyao:29048 denotes terminal domain
T9916 1585-1605 xzyao:27494 denotes developing endosperm
T70278 226-230 PO:0009010, funRiceGene:180 denotes seed
T29669 571-575 PO:0009010, funRiceGene:180 denotes seed
T74240 1284-1288 PO:0009010, funRiceGene:180 denotes seed
T79158 1070-1081 xzyao:8656 denotes amino acids
T67353 262-274 xzyao:24384 denotes central role
T29328 226-246 xzyao:36345 denotes seed storage protein
T94863 69-98 xzyao:11965 denotes endosperm-specific expression
T65852 290-319 xzyao:11965 denotes endosperm-specific expression
T62121 566-575 xzyao:29448 denotes rice seed
T6528 383-405 xzyao:2372 denotes transcriptional factor
T84168 1718-1739 xzyao:15923 denotes endosperm specificity
T2468 1560-1577 xzyao:34119 denotes subaleurone layer
T81475 69-78 PO:0009089, funRiceGene:253 denotes endosperm
M_22 290-299 PO:0009089, funRiceGene:253 denotes endosperm
M_23 1596-1605 PO:0009089, funRiceGene:253 denotes endosperm
M_24 1718-1727 PO:0009089, funRiceGene:253 denotes endosperm
M_25 664-674 xzyao:10364 denotes amino acid
M_26 987-992 hunflair:NA:Species denotes yeast
M_27 435-440 hunflair:NA:Species denotes maize
M_28 132-136 hunflair:NA:Gene denotes GCN4
M_29 148-152 hunflair:NA:Gene denotes GCN4
M_30 748-752 hunflair:NA:Gene denotes GCN4
M_31 915-919 hunflair:NA:Gene denotes GCN4
M_32 530-538 hunflair:NA:Gene denotes RISBZ1-5
M_33 664-674 hunflair:NA:Chemical denotes amino acid
M_34 703-708 hunflair:NA:Gene denotes RISBZ
M_35 1216-1221 hunflair:NA:Gene denotes RISBZ
M_36 993-997 hunflair:NA:Gene denotes GAL4
M_37 45-51 hunflair:NA:Gene denotes RISBZ1
M_38 530-536 hunflair:NA:Gene denotes RISBZ1
M_39 765-771 hunflair:NA:Gene denotes RISBZ1
M_40 1133-1139 hunflair:NA:Gene denotes RISBZ1
M_41 1240-1246 hunflair:NA:Gene denotes RISBZ1
M_42 1358-1364 hunflair:NA:Gene denotes RISBZ1
M_43 1688-1694 hunflair:NA:Gene denotes RISBZ1
M_44 132-142 hunflair:NA:Gene denotes GCN4 motif
M_45 148-158 hunflair:NA:Gene denotes GCN4 motif
M_46 748-758 hunflair:NA:Gene denotes GCN4 motif
M_47 915-925 hunflair:NA:Gene denotes GCN4 motif
M_48 1409-1427 hunflair:NA:Gene denotes beta-glucuronidase
M_49 1494-1512 hunflair:NA:Gene denotes beta-glucuronidase
M_50 362-405 hunflair:NA:Gene denotes basic leucine zipper transcriptional factor
M_51 2-6 hunflair:NA:Species denotes rice
M_52 566-570 hunflair:NA:Species denotes rice
M_53 1484-1488 hunflair:NA:Species denotes rice
M_54 1240-1251 hunflair:NA:Gene denotes RISBZ1 gene
M_55 1688-1699 hunflair:NA:Gene denotes RISBZ1 gene
M_56 987-992 pubtator:4932:Species denotes yeast
M_57 1048-1049 pubtator:MESH:D009584:Chemical denotes N
M_58 368-375 pubtator:MESH:C038361:Chemical denotes leucine
M_59 491-498 pubtator:MESH:C038361:Chemical denotes leucine
M_60 1035-1042 pubtator:MESH:C489032:Chemical denotes proline
M_61 2-6 pubtator:4530:Species denotes rice
M_62 566-570 pubtator:4530:Species denotes rice
M_63 1484-1488 pubtator:4530:Species denotes rice
M_64 451-453 pubtator:MESH:D013481:Chemical denotes O2
M_65 435-440 pubtator:4577:Species denotes maize
M_66 441-449 pubtator:MESH:D017438:Chemical denotes Opaque-2
M_67 993-997 pubtator:855828:Gene denotes GAL4

21k_plant_trait_mention

Id Subject Object Predicate Lexical cue
M_0 1662-1687 funRiceGene:470, xzyao:2738 denotes transcriptional activator
M_1 1718-1727 PO:0009089, funRiceGene:253 denotes endosperm
M_2 1718-1739 xzyao:4794 denotes endosperm specificity
M_3 226-230 PO:0009010, funRiceGene:180 denotes seed
M_4 571-575 PO:0009010, funRiceGene:180 denotes seed
M_5 530-538 hunflair:NA:Gene denotes RISBZ1-5
M_6 987-992 hunflair:NA:Species denotes yeast
M_7 132-142 hunflair:NA:Gene denotes GCN4 motif
M_8 148-158 hunflair:NA:Gene denotes GCN4 motif
M_9 748-758 hunflair:NA:Gene denotes GCN4 motif
M_10 915-925 hunflair:NA:Gene denotes GCN4 motif
M_11 45-51 hunflair:NA:Gene denotes RISBZ1
M_12 530-536 hunflair:NA:Gene denotes RISBZ1
M_13 765-771 hunflair:NA:Gene denotes RISBZ1
M_14 1133-1139 hunflair:NA:Gene denotes RISBZ1
M_15 1240-1246 hunflair:NA:Gene denotes RISBZ1
M_16 1358-1364 hunflair:NA:Gene denotes RISBZ1
M_17 1688-1694 hunflair:NA:Gene denotes RISBZ1
M_18 664-674 hunflair:NA:Chemical denotes amino acid
M_19 2-6 hunflair:NA:Species denotes rice
M_20 566-570 hunflair:NA:Species denotes rice
M_21 1484-1488 hunflair:NA:Species denotes rice
M_22 1409-1427 hunflair:NA:Gene denotes beta-glucuronidase
M_23 1494-1512 hunflair:NA:Gene denotes beta-glucuronidase
M_24 362-405 hunflair:NA:Gene denotes basic leucine zipper transcriptional factor
M_25 703-708 hunflair:NA:Gene denotes RISBZ
M_26 1216-1221 hunflair:NA:Gene denotes RISBZ
M_27 993-997 hunflair:NA:Gene denotes GAL4
M_28 1240-1251 hunflair:NA:Gene denotes RISBZ1 gene
M_29 1688-1699 hunflair:NA:Gene denotes RISBZ1 gene
M_30 132-136 hunflair:NA:Gene denotes GCN4
M_31 148-152 hunflair:NA:Gene denotes GCN4
M_32 748-752 hunflair:NA:Gene denotes GCN4
M_33 915-919 hunflair:NA:Gene denotes GCN4
M_34 435-440 hunflair:NA:Species denotes maize
M_35 451-453 pubtator:MESH:D013481:Chemical denotes O2
M_36 987-992 pubtator:4932:Species denotes yeast
M_37 441-449 pubtator:MESH:D017438:Chemical denotes Opaque-2
M_38 993-997 pubtator:855828:Gene denotes GAL4
M_39 1048-1049 pubtator:MESH:D009584:Chemical denotes N
M_40 368-375 pubtator:MESH:C038361:Chemical denotes leucine
M_41 491-498 pubtator:MESH:C038361:Chemical denotes leucine
M_42 1035-1042 pubtator:MESH:C489032:Chemical denotes proline
M_43 2-6 pubtator:4530:Species denotes rice
M_44 566-570 pubtator:4530:Species denotes rice
M_45 1484-1488 pubtator:4530:Species denotes rice
M_46 435-440 pubtator:4577:Species denotes maize

OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 45-51 http://identifiers.org/oryzabase.gene/7467 denotes RISBZ1
T2 530-536 http://identifiers.org/oryzabase.gene/7467 denotes RISBZ1
T3 765-771 http://identifiers.org/oryzabase.gene/7467 denotes RISBZ1
T4 1133-1139 http://identifiers.org/oryzabase.gene/7467 denotes RISBZ1
T5 1240-1246 http://identifiers.org/oryzabase.gene/7467 denotes RISBZ1
T6 1358-1364 http://identifiers.org/oryzabase.gene/7467 denotes RISBZ1
T7 1688-1694 http://identifiers.org/oryzabase.gene/7467 denotes RISBZ1
T62822 45-51 http://identifiers.org/ricegap/LOC_Os07g08420 denotes RISBZ1
T93246 530-536 http://identifiers.org/ricegap/LOC_Os07g08420 denotes RISBZ1
T89809 765-771 http://identifiers.org/ricegap/LOC_Os07g08420 denotes RISBZ1
T67844 1035-1042 http://identifiers.org/ricegap/LOC_Os07g39680 denotes proline
T55016 1133-1139 http://identifiers.org/ricegap/LOC_Os07g08420 denotes RISBZ1
T16921 1240-1246 http://identifiers.org/ricegap/LOC_Os07g08420 denotes RISBZ1
T87069 1358-1364 http://identifiers.org/ricegap/LOC_Os07g08420 denotes RISBZ1
T8 1688-1694 http://identifiers.org/ricegap/LOC_Os07g08420 denotes RISBZ1
T56900 45-51 http://identifiers.org/rapdb.locus/Os07g0182000 denotes RISBZ1
T79628 530-536 http://identifiers.org/rapdb.locus/Os07g0182000 denotes RISBZ1
T130 765-771 http://identifiers.org/rapdb.locus/Os07g0182000 denotes RISBZ1
T14696 1035-1042 http://identifiers.org/rapdb.locus/Os07g0585500 denotes proline
T13873 1133-1139 http://identifiers.org/rapdb.locus/Os07g0182000 denotes RISBZ1
T26728 1240-1246 http://identifiers.org/rapdb.locus/Os07g0182000 denotes RISBZ1
T10758 1358-1364 http://identifiers.org/rapdb.locus/Os07g0182000 denotes RISBZ1
T33815 1688-1694 http://identifiers.org/rapdb.locus/Os07g0182000 denotes RISBZ1
T91369 45-51 http://identifiers.org/uniprot/Q9AR01 denotes RISBZ1
T34534 530-536 http://identifiers.org/uniprot/Q9AR01 denotes RISBZ1
T83970 765-771 http://identifiers.org/uniprot/Q9AR01 denotes RISBZ1
T40709 1133-1139 http://identifiers.org/uniprot/Q9AR01 denotes RISBZ1
T52825 1240-1246 http://identifiers.org/uniprot/Q9AR01 denotes RISBZ1
T66961 1358-1364 http://identifiers.org/uniprot/Q9AR01 denotes RISBZ1
T25192 1688-1694 http://identifiers.org/uniprot/Q9AR01 denotes RISBZ1
M_0 1409-1427 hunflair:NA:Gene denotes beta-glucuronidase
M_1 1494-1512 hunflair:NA:Gene denotes beta-glucuronidase
M_2 703-708 hunflair:NA:Gene denotes RISBZ
M_3 1216-1221 hunflair:NA:Gene denotes RISBZ
M_4 132-142 hunflair:NA:Gene denotes GCN4 motif
M_5 148-158 hunflair:NA:Gene denotes GCN4 motif
M_6 748-758 hunflair:NA:Gene denotes GCN4 motif
M_7 915-925 hunflair:NA:Gene denotes GCN4 motif
M_8 664-674 hunflair:NA:Chemical denotes amino acid
M_9 993-997 hunflair:NA:Gene denotes GAL4
M_10 2-6 hunflair:NA:Species denotes rice
M_11 566-570 hunflair:NA:Species denotes rice
M_12 1484-1488 hunflair:NA:Species denotes rice
M_13 45-51 hunflair:NA:Gene denotes RISBZ1
M_14 530-536 hunflair:NA:Gene denotes RISBZ1
M_15 765-771 hunflair:NA:Gene denotes RISBZ1
M_16 1133-1139 hunflair:NA:Gene denotes RISBZ1
M_17 1240-1246 hunflair:NA:Gene denotes RISBZ1
M_18 1358-1364 hunflair:NA:Gene denotes RISBZ1
M_19 1688-1694 hunflair:NA:Gene denotes RISBZ1
M_20 530-538 hunflair:NA:Gene denotes RISBZ1-5
M_21 132-136 hunflair:NA:Gene denotes GCN4
M_22 148-152 hunflair:NA:Gene denotes GCN4
M_23 748-752 hunflair:NA:Gene denotes GCN4
M_24 915-919 hunflair:NA:Gene denotes GCN4
M_25 435-440 hunflair:NA:Species denotes maize
M_26 987-992 hunflair:NA:Species denotes yeast
M_27 1240-1251 hunflair:NA:Gene denotes RISBZ1 gene
M_28 1688-1699 hunflair:NA:Gene denotes RISBZ1 gene
M_29 362-405 hunflair:NA:Gene denotes basic leucine zipper transcriptional factor

sentences

Id Subject Object Predicate Lexical cue
T1 0-143 Sentence denotes A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
T2 144-320 Sentence denotes The GCN4 motif, a cis-element that is highly conserved in the promoters of cereal seed storage protein genes, plays a central role in controlling endosperm-specific expression.
T3 321-469 Sentence denotes This motif is the recognition site for a basic leucine zipper transcriptional factor that belongs to the group of maize Opaque-2 (O2)-like proteins.
T4 470-589 Sentence denotes Five different basic leucine zipper cDNA clones, designated RISBZ1-5, have been isolated from a rice seed cDNA library.
T5 590-685 Sentence denotes The predicted gene products can be divided into two groups based on their amino acid sequences.
T6 686-926 Sentence denotes Although all the RISBZ proteins are able to interact with the GCN4 motif, only RISBZ1 is capable of activating (more than 100-fold expression) the expression of a reporter gene under a minimal promoter fused to a pentamer of the GCN4 motif.
T7 927-1128 Sentence denotes Loss-of-function and gain-of-function experiments using the yeast GAL4 DNA binding domain revealed that the proline-rich N-terminal domain (27 amino acids in length) is responsible for transactivation.
T8 1129-1239 Sentence denotes The RISBZ1 protein is capable of forming homodimers as well as heterodimers with other RISBZ subunit proteins.
T9 1240-1348 Sentence denotes RISBZ1 gene expression is restricted to the seed, where it precedes the expression of storage protein genes.
T10 1349-1606 Sentence denotes When the RISBZ1 promoter was transcriptionally fused to the beta-glucuronidase reporter gene and the chimeric gene was introduced into rice, the beta-glucuronidase gene is specifically expressed in aleurone and subaleurone layer of the developing endosperm.
T11 1607-1769 Sentence denotes These findings suggest that the specific expression of transcriptional activator RISBZ1 gene may determine the endosperm specificity of the storage protein genes.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 69-78 http://purl.obolibrary.org/obo/MAT_0000227 denotes endosperm
T2 290-299 http://purl.obolibrary.org/obo/MAT_0000227 denotes endosperm
T3 1596-1605 http://purl.obolibrary.org/obo/MAT_0000227 denotes endosperm
T4 1718-1727 http://purl.obolibrary.org/obo/MAT_0000227 denotes endosperm

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 45-51 http://identifiers.org/oryzabase.gene/7467 denotes RISBZ1
T2 530-536 http://identifiers.org/oryzabase.gene/7467 denotes RISBZ1
T3 765-771 http://identifiers.org/oryzabase.gene/7467 denotes RISBZ1
T4 1133-1139 http://identifiers.org/oryzabase.gene/7467 denotes RISBZ1
T5 1240-1246 http://identifiers.org/oryzabase.gene/7467 denotes RISBZ1
T6 1358-1364 http://identifiers.org/oryzabase.gene/7467 denotes RISBZ1
T7 1688-1694 http://identifiers.org/oryzabase.gene/7467 denotes RISBZ1
T38808 45-51 http://identifiers.org/rapdb.locus/Os07g0182000 denotes RISBZ1
T63437 530-536 http://identifiers.org/rapdb.locus/Os07g0182000 denotes RISBZ1
T72435 765-771 http://identifiers.org/rapdb.locus/Os07g0182000 denotes RISBZ1
T34241 1133-1139 http://identifiers.org/rapdb.locus/Os07g0182000 denotes RISBZ1
T16170 1240-1246 http://identifiers.org/rapdb.locus/Os07g0182000 denotes RISBZ1
T51281 1358-1364 http://identifiers.org/rapdb.locus/Os07g0182000 denotes RISBZ1
T75020 1688-1694 http://identifiers.org/rapdb.locus/Os07g0182000 denotes RISBZ1

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 1409-1427 hunflair:NA:Gene denotes beta-glucuronidase
M_1 1494-1512 hunflair:NA:Gene denotes beta-glucuronidase
M_2 703-708 hunflair:NA:Gene denotes RISBZ
M_3 1216-1221 hunflair:NA:Gene denotes RISBZ
M_4 132-142 hunflair:NA:Gene denotes GCN4 motif
M_5 148-158 hunflair:NA:Gene denotes GCN4 motif
M_6 748-758 hunflair:NA:Gene denotes GCN4 motif
M_7 915-925 hunflair:NA:Gene denotes GCN4 motif
M_8 664-674 hunflair:NA:Chemical denotes amino acid
M_9 993-997 hunflair:NA:Gene denotes GAL4
M_10 2-6 hunflair:NA:Species denotes rice
M_11 566-570 hunflair:NA:Species denotes rice
M_12 1484-1488 hunflair:NA:Species denotes rice
M_13 45-51 hunflair:NA:Gene denotes RISBZ1
M_14 530-536 hunflair:NA:Gene denotes RISBZ1
M_15 765-771 hunflair:NA:Gene denotes RISBZ1
M_16 1133-1139 hunflair:NA:Gene denotes RISBZ1
M_17 1240-1246 hunflair:NA:Gene denotes RISBZ1
M_18 1358-1364 hunflair:NA:Gene denotes RISBZ1
M_19 1688-1694 hunflair:NA:Gene denotes RISBZ1
M_20 530-538 hunflair:NA:Gene denotes RISBZ1-5
M_21 132-136 hunflair:NA:Gene denotes GCN4
M_22 148-152 hunflair:NA:Gene denotes GCN4
M_23 748-752 hunflair:NA:Gene denotes GCN4
M_24 915-919 hunflair:NA:Gene denotes GCN4
M_25 435-440 hunflair:NA:Species denotes maize
M_26 987-992 hunflair:NA:Species denotes yeast
M_27 1240-1251 hunflair:NA:Gene denotes RISBZ1 gene
M_28 1688-1699 hunflair:NA:Gene denotes RISBZ1 gene
M_29 362-405 hunflair:NA:Gene denotes basic leucine zipper transcriptional factor

OryzaGP

Id Subject Object Predicate Lexical cue
T1 530-536 gene denotes RISBZ1
T2 1133-1139 gene denotes RISBZ1
T3 1240-1246 gene denotes RISBZ1
T4 1358-1364 gene denotes RISBZ1
T5 1688-1694 gene denotes RISBZ1

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 2-6 OrganismTaxon denotes rice 4530
T2 435-440 OrganismTaxon denotes maize 4577
T3 566-570 OrganismTaxon denotes rice 4530
T4 1484-1488 OrganismTaxon denotes rice 4530

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1572-1577 Body_part denotes layer http://purl.obolibrary.org/obo/UBERON_0000119|http://purl.obolibrary.org/obo/UBERON_0022303

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 69-78 Body_part denotes endosperm http://purl.obolibrary.org/obo/MAT_0000227
T2 290-299 Body_part denotes endosperm http://purl.obolibrary.org/obo/MAT_0000227
T3 1596-1605 Body_part denotes endosperm http://purl.obolibrary.org/obo/MAT_0000227
T4 1718-1727 Body_part denotes endosperm http://purl.obolibrary.org/obo/MAT_0000227