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pqqtest_sentence

Id Subject Object Predicate Lexical cue
M_0 1594-1603 cand:TO:0020008-sorghum grain mold denotes maize SPP
M_1 1594-1603 cand:TO:0000144-milled rice yield denotes maize SPP
M_2 1594-1603 cand:TO:0020015-sorghum leaf blight resistance denotes maize SPP
M_3 1594-1603 cand:TO:0000410-polished rice protein content denotes maize SPP
M_4 1594-1603 cand:TO:0000204-rice seedling blight disease resistance denotes maize SPP
M_5 1594-1603 cand:TO:0020007-sorghum shoot fly resistance denotes maize SPP
M_6 1594-1603 cand:PO:0025538-plant sap denotes maize SPP
M_7 1594-1603 cand:WTO:0000519-tan spot denotes maize SPP
M_8 1594-1603 cand:funRiceGene:34-meiosis denotes maize SPP
M_9 1594-1603 cand:funRiceGene:451-mitosis denotes maize SPP
M_10 1594-1603 cand:PO:0025540-phloem sap denotes maize SPP
M_11 1375-1396 cand:TO:0000599-enzyme activity trait denotes functional SPP enzyme
M_12 1375-1396 cand:TO:0000331-sucrose phosphate synthase activity trait denotes functional SPP enzyme
M_13 1375-1396 cand:TO:0005008-acetolactate synthase inhibitor sensitivity denotes functional SPP enzyme
M_14 1375-1396 cand:TO:0020072-residual beta-glucanase activity trait denotes functional SPP enzyme
M_15 1375-1396 cand:TO:0000647-relative acid phosphatase activity denotes functional SPP enzyme
M_16 1375-1396 cand:TO:0000699-sucrose synthase activity trait denotes functional SPP enzyme
M_17 1375-1396 cand:funRiceGene:389-nutritional quality denotes functional SPP enzyme
M_18 1375-1396 cand:PO:0006216-internal phloem denotes functional SPP enzyme
M_19 1375-1396 cand:PO:0006069-petal parenchyma denotes functional SPP enzyme
M_20 1375-1396 cand:PO:0006066-petiole parenchyma denotes functional SPP enzyme
M_21 1375-1396 cand:PO:0000244-functional megaspore denotes functional SPP enzyme
M_22 1600-1603 GeneID:RAPID:Os06g0625400MSUID:LOC_Os06g41990 denotes SPP
M_23 1386-1389 GeneID:RAPID:Os06g0625400MSUID:LOC_Os06g41990 denotes SPP
T39561 265-284 xzyao:5212 denotes carbon assimilation
T92262 1655-1666 funRiceGene:94 denotes phosphatase
T55784 379-391 xzyao:1553 denotes Oryza sativa
T58449 1504-1530 xzyao:14486 denotes sucrose-phosphate synthase
T28722 432-441 xzyao:34014 denotes rice leaf
T72424 58-95 xzyao:39260 denotes sucrose-6F-phosphate phosphohydrolase
T41339 58-65 funRiceGene:256 denotes sucrose
T34701 109-116 funRiceGene:256 denotes Sucrose
T15199 203-210 funRiceGene:256 denotes sucrose
T61390 574-581 funRiceGene:256 denotes sucrose
T30154 791-798 funRiceGene:256 denotes sucrose
T15197 1504-1511 funRiceGene:256 denotes sucrose
T65220 69-78 funRiceGene:62 denotes phosphate
T60571 122-131 funRiceGene:62 denotes phosphate
T48220 587-596 funRiceGene:62 denotes phosphate
T62708 1512-1521 funRiceGene:62 denotes phosphate
T15772 295-303 xzyao:38844 denotes the gene
T66553 1485-1500 xzyao:31167 denotes terminal region
T28339 203-223 xzyao:1170 denotes sucrose biosynthesis
T36217 1538-1543 funRiceGene:223 denotes BLAST
T56103 437-441 PO:0025034, funRiceGene:469 denotes leaf
T88614 506-528 xzyao:35726 denotes subunit molecular mass
T46874 1538-1550 xzyao:16360 denotes BLAST search
T57281 1216-1225 xzyao:40994 denotes maize SPP
M_24 1452-1461 xzyao:40994 denotes maize SPP
M_25 1594-1603 xzyao:40994 denotes maize SPP
M_26 913-923 xzyao:10364 denotes amino acid
M_27 1269-1279 xzyao:10364 denotes amino acid
M_28 1406-1416 xzyao:10364 denotes amino acid
M_29 1320-1336 hunflair:NA:Species denotes Escherichia coli
M_30 1623-1631 hunflair:NA:Chemical denotes haloacid
M_31 58-65 hunflair:NA:Chemical denotes sucrose
M_32 203-210 hunflair:NA:Chemical denotes sucrose
M_33 574-581 hunflair:NA:Chemical denotes sucrose
M_34 791-798 hunflair:NA:Chemical denotes sucrose
M_35 1504-1511 hunflair:NA:Chemical denotes sucrose
M_36 986-1006 hunflair:NA:Species denotes Arabidopsis thaliana
M_37 1504-1530 hunflair:NA:Gene denotes sucrose-phosphate synthase
M_38 240-246 hunflair:NA:Gene denotes enzyme
M_39 333-339 hunflair:NA:Gene denotes enzyme
M_40 442-448 hunflair:NA:Gene denotes enzyme
M_41 544-550 hunflair:NA:Gene denotes enzyme
M_42 1390-1396 hunflair:NA:Gene denotes enzyme
M_43 913-923 hunflair:NA:Chemical denotes amino acid
M_44 1269-1279 hunflair:NA:Chemical denotes amino acid
M_45 1406-1416 hunflair:NA:Chemical denotes amino acid
M_46 373-377 hunflair:NA:Species denotes rice
M_47 432-436 hunflair:NA:Species denotes rice
M_48 845-849 hunflair:NA:Species denotes rice
M_49 58-78 hunflair:NA:Chemical denotes sucrose-6F-phosphate
M_50 1058-1083 hunflair:NA:Species denotes Synechocystis sp. PCC6803
M_51 379-391 hunflair:NA:Species denotes Oryza sativa
M_52 155-157 hunflair:NA:Gene denotes EC
M_53 1623-1678 hunflair:NA:Gene denotes haloacid dehalogenase hydrolase/phosphatase superfamily
M_54 1126-1131 hunflair:NA:Species denotes maize
M_55 1216-1221 hunflair:NA:Species denotes maize
M_56 1452-1457 hunflair:NA:Species denotes maize
M_57 1594-1599 hunflair:NA:Species denotes maize
M_58 986-997 hunflair:NA:Species denotes Arabidopsis
M_59 1113-1124 hunflair:NA:Species denotes Arabidopsis
M_60 265-271 hunflair:NA:Chemical denotes carbon
M_61 150-153 hunflair:NA:Gene denotes SPP
M_62 850-853 hunflair:NA:Gene denotes SPP
M_63 1222-1225 hunflair:NA:Gene denotes SPP
M_64 1386-1389 hunflair:NA:Gene denotes SPP
M_65 1458-1461 hunflair:NA:Gene denotes SPP
M_66 1600-1603 hunflair:NA:Gene denotes SPP
M_67 919-923 hunflair:NA:Chemical denotes acid
M_68 1275-1279 hunflair:NA:Chemical denotes acid
M_69 1412-1416 hunflair:NA:Chemical denotes acid
M_70 859-879 hunflair:NA:Gene denotes endoproteinase Lys-C
M_71 58-95 hunflair:NA:Gene denotes sucrose-6F-phosphate phosphohydrolase
M_72 265-271 pubtator:MESH:D002244:Chemical denotes carbon
M_73 58-65 pubtator:MESH:D013395:Chemical denotes sucrose
M_74 203-210 pubtator:MESH:D013395:Chemical denotes sucrose
M_75 574-581 pubtator:MESH:D013395:Chemical denotes sucrose
M_76 791-798 pubtator:MESH:D013395:Chemical denotes sucrose
M_77 1504-1511 pubtator:MESH:D013395:Chemical denotes sucrose
M_78 986-1006 pubtator:3702:Species denotes Arabidopsis thaliana
M_79 1043-1071 pubtator:1143:Species denotes cyanobacterium Synechocystis
M_80 1320-1336 pubtator:562:Species denotes Escherichia coli
M_81 1402-1416 pubtator:MESH:C000589285:Chemical denotes 260-amino acid
M_82 1417-1418 pubtator:MESH:D009584:Chemical denotes N
M_83 986-997 pubtator:3702:Species denotes Arabidopsis
M_84 1113-1124 pubtator:3702:Species denotes Arabidopsis
M_85 874-877 pubtator:MESH:C026591:Chemical denotes Lys
M_86 878-879 pubtator:MESH:D002244:Chemical denotes C
M_87 1483-1484 pubtator:MESH:D002244:Chemical denotes C
M_88 379-393 pubtator:4530:Species denotes Oryza sativa L
M_89 1076-1083 pubtator:MESH:C059699:Chemical denotes PCC6803
M_90 58-78 pubtator:MESH:C535046:Chemical denotes sucrose-6F-phosphate
M_91 373-377 pubtator:4530:Species denotes rice
M_92 432-436 pubtator:4530:Species denotes rice
M_93 845-849 pubtator:4530:Species denotes rice
M_94 1504-1521 pubtator:MESH:C535046:Chemical denotes sucrose-phosphate
M_95 1126-1131 pubtator:4577:Species denotes maize
M_96 1216-1221 pubtator:4577:Species denotes maize
M_97 1452-1457 pubtator:4577:Species denotes maize
M_98 1594-1599 pubtator:4577:Species denotes maize

21k_plant_trait_mention

Id Subject Object Predicate Lexical cue
M_0 437-441 PO:0025034, funRiceGene:469 denotes leaf
M_1 506-528 xzyao:12551 denotes subunit molecular mass
M_2 203-210 funRiceGene:256 denotes sucrose
M_3 574-581 funRiceGene:256 denotes sucrose
M_4 1534-1550 xzyao:6071 denotes PSI-BLAST search
M_5 379-391 hunflair:NA:Species denotes Oryza sativa
M_6 58-95 hunflair:NA:Gene denotes sucrose-6F-phosphate phosphohydrolase
M_7 1623-1678 hunflair:NA:Gene denotes haloacid dehalogenase hydrolase/phosphatase superfamily
M_8 240-246 hunflair:NA:Gene denotes enzyme
M_9 333-339 hunflair:NA:Gene denotes enzyme
M_10 442-448 hunflair:NA:Gene denotes enzyme
M_11 544-550 hunflair:NA:Gene denotes enzyme
M_12 1390-1396 hunflair:NA:Gene denotes enzyme
M_13 986-997 hunflair:NA:Species denotes Arabidopsis
M_14 1113-1124 hunflair:NA:Species denotes Arabidopsis
M_15 265-271 hunflair:NA:Chemical denotes carbon
M_16 1058-1083 hunflair:NA:Species denotes Synechocystis sp. PCC6803
M_17 58-78 hunflair:NA:Chemical denotes sucrose-6F-phosphate
M_18 913-923 hunflair:NA:Chemical denotes amino acid
M_19 1269-1279 hunflair:NA:Chemical denotes amino acid
M_20 1406-1416 hunflair:NA:Chemical denotes amino acid
M_21 58-65 hunflair:NA:Chemical denotes sucrose
M_22 203-210 hunflair:NA:Chemical denotes sucrose
M_23 574-581 hunflair:NA:Chemical denotes sucrose
M_24 791-798 hunflair:NA:Chemical denotes sucrose
M_25 1504-1511 hunflair:NA:Chemical denotes sucrose
M_26 1504-1530 hunflair:NA:Gene denotes sucrose-phosphate synthase
M_27 150-153 hunflair:NA:Gene denotes SPP
M_28 850-853 hunflair:NA:Gene denotes SPP
M_29 1222-1225 hunflair:NA:Gene denotes SPP
M_30 1386-1389 hunflair:NA:Gene denotes SPP
M_31 1458-1461 hunflair:NA:Gene denotes SPP
M_32 1600-1603 hunflair:NA:Gene denotes SPP
M_33 155-157 hunflair:NA:Gene denotes EC
M_34 1623-1631 hunflair:NA:Chemical denotes haloacid
M_35 1320-1336 hunflair:NA:Species denotes Escherichia coli
M_36 1126-1131 hunflair:NA:Species denotes maize
M_37 1216-1221 hunflair:NA:Species denotes maize
M_38 1452-1457 hunflair:NA:Species denotes maize
M_39 1594-1599 hunflair:NA:Species denotes maize
M_40 986-1006 hunflair:NA:Species denotes Arabidopsis thaliana
M_41 373-377 hunflair:NA:Species denotes rice
M_42 432-436 hunflair:NA:Species denotes rice
M_43 845-849 hunflair:NA:Species denotes rice
M_44 859-879 hunflair:NA:Gene denotes endoproteinase Lys-C
M_45 919-923 hunflair:NA:Chemical denotes acid
M_46 1275-1279 hunflair:NA:Chemical denotes acid
M_47 1412-1416 hunflair:NA:Chemical denotes acid
M_48 58-78 pubtator:MESH:C535046:Chemical denotes sucrose-6F-phosphate
M_49 986-1006 pubtator:3702:Species denotes Arabidopsis thaliana
M_50 1417-1418 pubtator:MESH:D009584:Chemical denotes N
M_51 986-997 pubtator:3702:Species denotes Arabidopsis
M_52 1113-1124 pubtator:3702:Species denotes Arabidopsis
M_53 1320-1336 pubtator:562:Species denotes Escherichia coli
M_54 373-377 pubtator:4530:Species denotes rice
M_55 432-436 pubtator:4530:Species denotes rice
M_56 845-849 pubtator:4530:Species denotes rice
M_57 878-879 pubtator:MESH:D002244:Chemical denotes C
M_58 1483-1484 pubtator:MESH:D002244:Chemical denotes C
M_59 265-271 pubtator:MESH:D002244:Chemical denotes carbon
M_60 1504-1521 pubtator:MESH:C535046:Chemical denotes sucrose-phosphate
M_61 1126-1131 pubtator:4577:Species denotes maize
M_62 1216-1221 pubtator:4577:Species denotes maize
M_63 1452-1457 pubtator:4577:Species denotes maize
M_64 1594-1599 pubtator:4577:Species denotes maize
M_65 58-65 pubtator:MESH:D013395:Chemical denotes sucrose
M_66 203-210 pubtator:MESH:D013395:Chemical denotes sucrose
M_67 574-581 pubtator:MESH:D013395:Chemical denotes sucrose
M_68 791-798 pubtator:MESH:D013395:Chemical denotes sucrose
M_69 1504-1511 pubtator:MESH:D013395:Chemical denotes sucrose
M_70 379-393 pubtator:4530:Species denotes Oryza sativa L
M_71 874-877 pubtator:MESH:C026591:Chemical denotes Lys
M_72 1402-1416 pubtator:MESH:C000589285:Chemical denotes 260-amino acid
M_73 1076-1083 pubtator:MESH:C059699:Chemical denotes PCC6803
M_74 1043-1071 pubtator:1143:Species denotes cyanobacterium Synechocystis

PMID_GLOBAL

Id Subject Object Predicate Lexical cue
T1 0-108 Sentence denotes Purification, molecular cloning, and sequence analysis of sucrose-6F-phosphate phosphohydrolase from plants.
T2 109-328 Sentence denotes Sucrose-6(F)-phosphate phosphohydrolase (SPP; EC ) catalyzes the final step in the pathway of sucrose biosynthesis and is the only enzyme of photosynthetic carbon assimilation for which the gene has not been identified.
T3 329-427 Sentence denotes The enzyme was purified to homogeneity from rice (Oryza sativa L.) leaves and partially sequenced.
T4 428-539 Sentence denotes The rice leaf enzyme is a dimer with a native molecular mass of 100 kDa and a subunit molecular mass of 50 kDa.
T5 540-686 Sentence denotes The enzyme is highly specific for sucrose 6(F)-phosphate with a K(m) of 65 microM and a specific activity of 1250 micromol min(-1) mg(-1) protein.
T6 687-799 Sentence denotes The activity is dependent on Mg(2+) with a remarkably low K(a) of 8-9 microM and is weakly inhibited by sucrose.
T7 800-1075 Sentence denotes Three peptides from cleavage of the purified rice SPP with endoproteinase Lys-C showed similarity to the deduced amino acid sequences of three predicted open reading frames (ORF) in the Arabidopsis thaliana genome and one in the genome of the cyanobacterium Synechocystis sp.
T8 1076-1202 Sentence denotes PCC6803, as well as cDNA clones from Arabidopsis, maize, and other species in the GenBank database of expressed sequence tags.
T9 1203-1292 Sentence denotes The putative maize SPP cDNA clone contained an ORF encoding a 420-amino acid polypeptide.
T10 1293-1397 Sentence denotes Heterologous expression in Escherichia coli showed that this cDNA clone encoded a functional SPP enzyme.
T11 1398-1531 Sentence denotes The 260-amino acid N-terminal catalytic domain of the maize SPP is homologous to the C-terminal region of sucrose-phosphate synthase.
T12 1532-1679 Sentence denotes A PSI-BLAST search of the GenBank database indicated that the maize SPP is a member of the haloacid dehalogenase hydrolase/phosphatase superfamily.

funRiceGenes-all

Id Subject Object Predicate Lexical cue
PTO-all_T1 1072-1074 http://purl.obolibrary.org/obo/TO_0000559 denotes sp
PTO-all_T2 1504-1530 http://purl.obolibrary.org/obo/TO_0000331 denotes sucrose-phosphate synthase