PubMed:11030749
Annnotations
Glycan-Motif
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 270-281 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 270-281 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 270-281 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 197-207 | http://purl.obolibrary.org/obo/MAT_0000043 | denotes | intestinal |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-86 | Sentence | denotes | Preparation and structural determination of dermatan sulfate-derived oligosaccharides. |
| TextSentencer_T2 | 87-188 | Sentence | denotes | Eight oligosaccharides were prepared from dermatan sulfate (DS) and their structures were elucidated. |
| TextSentencer_T3 | 189-313 | Sentence | denotes | Porcine intestinal mucosal DS was subjected to controlled depolymerization using chondroitin ABC lyase (chondroitinase ABC). |
| TextSentencer_T4 | 314-418 | Sentence | denotes | The oligosaccharide mixture formed was fractionated by low-pressure gel permeation chromatography (GPC). |
| TextSentencer_T5 | 419-564 | Sentence | denotes | Size uniform mixtures of disaccharides, tetrasaccharides, hexasaccharides, octasaccharides, decasaccharides, and dodecasaccharides were obtained. |
| TextSentencer_T6 | 565-742 | Sentence | denotes | Each size-fractionated mixture was then purified on the basis of charge by repetitive semi-preparative strong-anion-exchange (SAX) high-performance liquid chromatography (HPLC). |
| TextSentencer_T7 | 743-818 | Sentence | denotes | This approach has led to the isolation of six homogeneous oligosaccharides. |
| TextSentencer_T8 | 819-883 | Sentence | denotes | The size of the oligosaccharides were determined using GPC-HPLC. |
| TextSentencer_T9 | 884-1022 | Sentence | denotes | Treatment of tetrasaccharide and hexasaccharide fragments with Hg(OAc)2 afforded trisaccharide and pentasaccharide products, respectively. |
| TextSentencer_T10 | 1023-1140 | Sentence | denotes | The purity of the oligosaccharides obtained was confirmed by analytical SAX-HPLC, and capillary electrophoresis (CE). |
| TextSentencer_T11 | 1141-1393 | Sentence | denotes | The molecular mass and degree of sulfation of the eight purified oligosaccharides were elucidated using electrospray ionization (ESI) mass spectrometry and their structures were established with high field nuclear magnetic resonance (NMR) spectroscopy. |
| TextSentencer_T12 | 1394-1517 | Sentence | denotes | These DS-oligosaccharides are currently being used to study for interaction of the DS with biologically important proteins. |
| T1 | 0-86 | Sentence | denotes | Preparation and structural determination of dermatan sulfate-derived oligosaccharides. |
| T2 | 87-188 | Sentence | denotes | Eight oligosaccharides were prepared from dermatan sulfate (DS) and their structures were elucidated. |
| T3 | 189-313 | Sentence | denotes | Porcine intestinal mucosal DS was subjected to controlled depolymerization using chondroitin ABC lyase (chondroitinase ABC). |
| T4 | 314-418 | Sentence | denotes | The oligosaccharide mixture formed was fractionated by low-pressure gel permeation chromatography (GPC). |
| T5 | 419-564 | Sentence | denotes | Size uniform mixtures of disaccharides, tetrasaccharides, hexasaccharides, octasaccharides, decasaccharides, and dodecasaccharides were obtained. |
| T6 | 565-742 | Sentence | denotes | Each size-fractionated mixture was then purified on the basis of charge by repetitive semi-preparative strong-anion-exchange (SAX) high-performance liquid chromatography (HPLC). |
| T7 | 743-818 | Sentence | denotes | This approach has led to the isolation of six homogeneous oligosaccharides. |
| T8 | 819-883 | Sentence | denotes | The size of the oligosaccharides were determined using GPC-HPLC. |
| T9 | 884-1022 | Sentence | denotes | Treatment of tetrasaccharide and hexasaccharide fragments with Hg(OAc)2 afforded trisaccharide and pentasaccharide products, respectively. |
| T10 | 1023-1140 | Sentence | denotes | The purity of the oligosaccharides obtained was confirmed by analytical SAX-HPLC, and capillary electrophoresis (CE). |
| T11 | 1141-1393 | Sentence | denotes | The molecular mass and degree of sulfation of the eight purified oligosaccharides were elucidated using electrospray ionization (ESI) mass spectrometry and their structures were established with high field nuclear magnetic resonance (NMR) spectroscopy. |
| T12 | 1394-1517 | Sentence | denotes | These DS-oligosaccharides are currently being used to study for interaction of the DS with biologically important proteins. |
| T1 | 0-86 | Sentence | denotes | Preparation and structural determination of dermatan sulfate-derived oligosaccharides. |
| T2 | 87-188 | Sentence | denotes | Eight oligosaccharides were prepared from dermatan sulfate (DS) and their structures were elucidated. |
| T3 | 189-313 | Sentence | denotes | Porcine intestinal mucosal DS was subjected to controlled depolymerization using chondroitin ABC lyase (chondroitinase ABC). |
| T4 | 314-418 | Sentence | denotes | The oligosaccharide mixture formed was fractionated by low-pressure gel permeation chromatography (GPC). |
| T5 | 419-564 | Sentence | denotes | Size uniform mixtures of disaccharides, tetrasaccharides, hexasaccharides, octasaccharides, decasaccharides, and dodecasaccharides were obtained. |
| T6 | 565-742 | Sentence | denotes | Each size-fractionated mixture was then purified on the basis of charge by repetitive semi-preparative strong-anion-exchange (SAX) high-performance liquid chromatography (HPLC). |
| T7 | 743-818 | Sentence | denotes | This approach has led to the isolation of six homogeneous oligosaccharides. |
| T8 | 819-883 | Sentence | denotes | The size of the oligosaccharides were determined using GPC-HPLC. |
| T9 | 884-1022 | Sentence | denotes | Treatment of tetrasaccharide and hexasaccharide fragments with Hg(OAc)2 afforded trisaccharide and pentasaccharide products, respectively. |
| T10 | 1023-1140 | Sentence | denotes | The purity of the oligosaccharides obtained was confirmed by analytical SAX-HPLC, and capillary electrophoresis (CE). |
| T11 | 1141-1393 | Sentence | denotes | The molecular mass and degree of sulfation of the eight purified oligosaccharides were elucidated using electrospray ionization (ESI) mass spectrometry and their structures were established with high field nuclear magnetic resonance (NMR) spectroscopy. |
| T12 | 1394-1517 | Sentence | denotes | These DS-oligosaccharides are currently being used to study for interaction of the DS with biologically important proteins. |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 270-281 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
GlycoBiology-FMA
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| _T1 | 44-52 | FMAID:67104 | denotes | dermatan |
| _T2 | 44-52 | FMAID:165189 | denotes | dermatan |
| _T3 | 44-60 | FMAID:165192 | denotes | dermatan sulfate |
| _T4 | 69-85 | FMAID:196731 | denotes | oligosaccharides |
| _T5 | 69-85 | FMAID:82742 | denotes | oligosaccharides |
| _T6 | 93-109 | FMAID:82742 | denotes | oligosaccharides |
| _T7 | 93-109 | FMAID:196731 | denotes | oligosaccharides |
| _T8 | 129-137 | FMAID:67104 | denotes | dermatan |
| _T9 | 129-137 | FMAID:165189 | denotes | dermatan |
| _T10 | 129-145 | FMAID:165192 | denotes | dermatan sulfate |
| _T11 | 197-207 | FMAID:93674 | denotes | intestinal |
| _T12 | 197-207 | FMAID:7199 | denotes | intestinal |
| _T13 | 197-207 | FMAID:226991 | denotes | intestinal |
| _T14 | 197-215 | FMAID:15695 | denotes | intestinal mucosal |
| _T15 | 197-215 | FMAID:105934 | denotes | intestinal mucosal |
| _T16 | 318-333 | FMAID:196731 | denotes | oligosaccharide |
| _T17 | 318-333 | FMAID:82742 | denotes | oligosaccharide |
| _T18 | 444-457 | FMAID:196733 | denotes | disaccharides |
| _T19 | 444-457 | FMAID:82744 | denotes | disaccharides |
| _T20 | 713-719 | FMAID:85815 | denotes | liquid |
| _T21 | 801-817 | FMAID:82742 | denotes | oligosaccharides |
| _T22 | 801-817 | FMAID:196731 | denotes | oligosaccharides |
| _T23 | 835-851 | FMAID:82742 | denotes | oligosaccharides |
| _T24 | 835-851 | FMAID:196731 | denotes | oligosaccharides |
| _T25 | 1041-1057 | FMAID:82742 | denotes | oligosaccharides |
| _T26 | 1041-1057 | FMAID:196731 | denotes | oligosaccharides |
| _T27 | 1109-1118 | FMAID:63194 | denotes | capillary |
| _T28 | 1109-1118 | FMAID:167591 | denotes | capillary |
| _T29 | 1206-1222 | FMAID:82742 | denotes | oligosaccharides |
| _T30 | 1206-1222 | FMAID:196731 | denotes | oligosaccharides |
| _T31 | 1403-1419 | FMAID:196731 | denotes | oligosaccharides |
| _T32 | 1403-1419 | FMAID:82742 | denotes | oligosaccharides |
| _T33 | 1508-1516 | FMAID:67257 | denotes | proteins |
| _T34 | 1508-1516 | FMAID:165447 | denotes | proteins |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 147-149 | http://www.uniprot.org/uniprot/P49366 | denotes | DS |
| T2 | 216-218 | http://www.uniprot.org/uniprot/P49366 | denotes | DS |
| T3 | 1400-1402 | http://www.uniprot.org/uniprot/P49366 | denotes | DS |
| T4 | 1477-1479 | http://www.uniprot.org/uniprot/P49366 | denotes | DS |
| T5 | 293-307 | http://www.uniprot.org/uniprot/P34059 | denotes | chondroitinase |
| T6 | 413-416 | http://www.uniprot.org/uniprot/P04921 | denotes | GPC |
| T7 | 874-877 | http://www.uniprot.org/uniprot/P04921 | denotes | GPC |
| T8 | 1270-1273 | http://www.uniprot.org/uniprot/P19957 | denotes | ESI |
uniprot-mouse
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 293-307 | http://www.uniprot.org/uniprot/Q571E4 | denotes | chondroitinase |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1109-1118 | http://purl.bioontology.org/ontology/NCBITAXON/119095 | denotes | capillary |
| T2 | 1109-1118 | http://purl.bioontology.org/ontology/NCBITAXON/241203 | denotes | capillary |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 53-60 | http://purl.obolibrary.org/obo/GO_0051923 | denotes | sulfate |
| T2 | 138-145 | http://purl.obolibrary.org/obo/GO_0051923 | denotes | sulfate |
| T3 | 1174-1183 | http://purl.obolibrary.org/obo/GO_0051923 | denotes | sulfation |
| T4 | 270-291 | http://purl.obolibrary.org/obo/GO_0047486 | denotes | chondroitin ABC lyase |
| T5 | 293-307 | http://purl.obolibrary.org/obo/GO_0043890 | denotes | chondroitinase |
| T6 | 681-689 | http://purl.obolibrary.org/obo/GO_0015297 | denotes | exchange |
| T7 | 1498-1516 | http://purl.obolibrary.org/obo/GO_0017038 | denotes | important proteins |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 197-207 | http://purl.obolibrary.org/obo/UBERON_0000160 | denotes | intestinal |
| T2 | 197-215 | http://purl.obolibrary.org/obo/UBERON_0001242 | denotes | intestinal mucosal |
| T3 | 1109-1118 | http://purl.obolibrary.org/obo/UBERON_0001982 | denotes | capillary |
EDAM-topics
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 16-40 | http://edamontology.org/topic_2226 | denotes | structural determination |
| T2 | 16-40 | http://edamontology.org/topic_1317 | denotes | structural determination |
| T3 | 1275-1292 | http://edamontology.org/topic_0134 | denotes | mass spectrometry |
| T4 | 1275-1292 | http://edamontology.org/topic_3520 | denotes | mass spectrometry |
| T5 | 1347-1373 | http://edamontology.org/topic_3444 | denotes | nuclear magnetic resonance |
| T6 | 1375-1378 | http://edamontology.org/topic_0593 | denotes | NMR |
| T7 | 1375-1392 | http://edamontology.org/topic_0593 | denotes | NMR) spectroscopy |
| T8 | 1380-1392 | http://edamontology.org/topic_0593 | denotes | spectroscopy |
| T9 | 1448-1453 | http://edamontology.org/topic_3678 | denotes | study |
| T10 | 1458-1469 | http://edamontology.org/topic_0602 | denotes | interaction |
| T11 | 1508-1516 | http://edamontology.org/topic_0078 | denotes | proteins |
EDAM-DFO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 16-26 | http://edamontology.org/data_0883 | denotes | structural |
| T2 | 161-171 | http://edamontology.org/data_0883 | denotes | structures |
| T3 | 1145-1159 | http://edamontology.org/data_0844 | denotes | molecular mass |
| T4 | 1275-1292 | http://edamontology.org/data_3147 | denotes | mass spectrometry |
| T5 | 1275-1292 | http://edamontology.org/data_2536 | denotes | mass spectrometry |
| T6 | 1303-1313 | http://edamontology.org/data_0883 | denotes | structures |
| T7 | 1508-1516 | http://edamontology.org/format_1208 | denotes | proteins |
| T8 | 1508-1516 | http://edamontology.org/data_1467 | denotes | proteins |
GlycoBiology-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 197-207 | http://purl.obolibrary.org/obo/MAT_0000043 | denotes | intestinal |
GlycoBiology-Motifs
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 44-60 | http://rdf.glycoinfo.org/glycan/G00019MO | denotes | dermatan sulfate |
| T2 | 129-145 | http://rdf.glycoinfo.org/glycan/G00019MO | denotes | dermatan sulfate |
| T3 | 270-281 | http://rdf.glycoinfo.org/glycan/G00018MO | denotes | chondroitin |
GlycoBiology-Epitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoEpitope-B_T1 | 270-281 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
performance-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T1 | 197-207 | http://purl.obolibrary.org/obo/UBERON_0000160 | denotes | intestinal |
| PD-UBERON-AE-B_T2 | 197-215 | http://purl.obolibrary.org/obo/UBERON_0001242 | denotes | intestinal mucosal |
| PD-UBERON-AE-B_T3 | 1109-1118 | http://purl.obolibrary.org/obo/UBERON_0001982 | denotes | capillary |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 270-281 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 197-207 | Body_part | denotes | intestinal | http://purl.obolibrary.org/obo/MAT_0000043 |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 270-281 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 1109-1118 | Body_part | denotes | capillary | http://purl.obolibrary.org/obo/UBERON_0001982 |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-86 | Sentence | denotes | Preparation and structural determination of dermatan sulfate-derived oligosaccharides. |
| T2 | 87-188 | Sentence | denotes | Eight oligosaccharides were prepared from dermatan sulfate (DS) and their structures were elucidated. |
| T3 | 189-313 | Sentence | denotes | Porcine intestinal mucosal DS was subjected to controlled depolymerization using chondroitin ABC lyase (chondroitinase ABC). |
| T4 | 314-418 | Sentence | denotes | The oligosaccharide mixture formed was fractionated by low-pressure gel permeation chromatography (GPC). |
| T5 | 419-564 | Sentence | denotes | Size uniform mixtures of disaccharides, tetrasaccharides, hexasaccharides, octasaccharides, decasaccharides, and dodecasaccharides were obtained. |
| T6 | 565-742 | Sentence | denotes | Each size-fractionated mixture was then purified on the basis of charge by repetitive semi-preparative strong-anion-exchange (SAX) high-performance liquid chromatography (HPLC). |
| T7 | 743-818 | Sentence | denotes | This approach has led to the isolation of six homogeneous oligosaccharides. |
| T8 | 819-883 | Sentence | denotes | The size of the oligosaccharides were determined using GPC-HPLC. |
| T9 | 884-1022 | Sentence | denotes | Treatment of tetrasaccharide and hexasaccharide fragments with Hg(OAc)2 afforded trisaccharide and pentasaccharide products, respectively. |
| T10 | 1023-1140 | Sentence | denotes | The purity of the oligosaccharides obtained was confirmed by analytical SAX-HPLC, and capillary electrophoresis (CE). |
| T11 | 1141-1393 | Sentence | denotes | The molecular mass and degree of sulfation of the eight purified oligosaccharides were elucidated using electrospray ionization (ESI) mass spectrometry and their structures were established with high field nuclear magnetic resonance (NMR) spectroscopy. |
| T12 | 1394-1517 | Sentence | denotes | These DS-oligosaccharides are currently being used to study for interaction of the DS with biologically important proteins. |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 270-281 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
GlyCosmos15-FMA
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 197-207 | Body_part | denotes | intestinal | FMA:7199 |
| T2 | 1109-1118 | Body_part | denotes | capillary | FMA:63194 |
GlyCosmos15-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 197-207 | Body_part | denotes | intestinal | http://purl.obolibrary.org/obo/MAT_0000043 |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 270-281 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 1109-1118 | Body_part | denotes | capillary | http://purl.obolibrary.org/obo/UBERON_0001982 |