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PubMed:11030748 / 238-998 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T8 61-64 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T9 61-64 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T10 238-241 https://glytoucan.org/Structures/Glycans/G61168WC denotes GM2
T11 238-241 https://glytoucan.org/Structures/Glycans/G79389NT denotes GM2
T12 283-299 https://glytoucan.org/Structures/Glycans/G20420WT denotes lactosylceramide
T13 283-299 https://glytoucan.org/Structures/Glycans/G74621DY denotes lactosylceramide
T14 283-299 https://glytoucan.org/Structures/Glycans/G84224TW denotes lactosylceramide
T15 312-315 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T16 312-315 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T17 421-424 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T18 421-424 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T19 461-464 https://glytoucan.org/Structures/Glycans/G61168WC denotes GM2
T20 461-464 https://glytoucan.org/Structures/Glycans/G79389NT denotes GM2
T21 555-558 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T22 555-558 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T23 607-610 https://glytoucan.org/Structures/Glycans/G61168WC denotes GM2
T24 607-610 https://glytoucan.org/Structures/Glycans/G79389NT denotes GM2
T25 658-661 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T26 658-661 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T27 713-716 https://glytoucan.org/Structures/Glycans/G61168WC denotes GM2
T28 713-716 https://glytoucan.org/Structures/Glycans/G79389NT denotes GM2

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T8 61-64 Glycan_Motif denotes GM3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH
T10 238-241 Glycan_Motif denotes GM2 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G79389NT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G61168WC
T12 283-299 Glycan_Motif denotes lactosylceramide https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G84224TW|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G74621DY|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G20420WT
T15 301-307 Glycan_Motif denotes LacCer https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G84224TW
T16 312-315 Glycan_Motif denotes GM3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH
T18 421-424 Glycan_Motif denotes GM3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH
T20 461-464 Glycan_Motif denotes GM2 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G79389NT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G61168WC
T22 555-558 Glycan_Motif denotes GM3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH
T24 607-610 Glycan_Motif denotes GM2 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G79389NT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G61168WC
T26 658-661 Glycan_Motif denotes GM3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH
T28 713-716 Glycan_Motif denotes GM2 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G79389NT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G61168WC

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 137-142 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T3 0-194 Sentence denotes However, there are conflicting reports as to the location of GM3 synthase; originally this enzyme was detected in the early Golgi of rat liver but a recent report localized it to the late Golgi.
TextSentencer_T4 195-392 Sentence denotes We have used chimeric forms of ganglioside GM2 synthase to determine if the location of lactosylceramide (LacCer) to GM3 conversion in Chinese hamster ovary (CHO) cells was the early or late Golgi.
TextSentencer_T5 393-760 Sentence denotes Our approach tested whether GM3 could be utilized as a substrate by GM2 synthase chimeras which were targeted to compartments earlier than the trans Golgi, i.e., GM3 produced in the cis Golgi should be utilized by GM2 synthase located anywhere in the Golgi whereas GM3 produced in the trans Golgi should only be used by GM2 synthase located in the trans Golgi or TGN.
T3 0-760 Sentence denotes However, there are conflicting reports as to the location of GM3 synthase; originally this enzyme was detected in the early Golgi of rat liver but a recent report localized it to the late Golgi. We have used chimeric forms of ganglioside GM2 synthase to determine if the location of lactosylceramide (LacCer) to GM3 conversion in Chinese hamster ovary (CHO) cells was the early or late Golgi. Our approach tested whether GM3 could be utilized as a substrate by GM2 synthase chimeras which were targeted to compartments earlier than the trans Golgi, i.e., GM3 produced in the cis Golgi should be utilized by GM2 synthase located anywhere in the Golgi whereas GM3 produced in the trans Golgi should only be used by GM2 synthase located in the trans Golgi or TGN.
T3 0-194 Sentence denotes However, there are conflicting reports as to the location of GM3 synthase; originally this enzyme was detected in the early Golgi of rat liver but a recent report localized it to the late Golgi.
T4 195-392 Sentence denotes We have used chimeric forms of ganglioside GM2 synthase to determine if the location of lactosylceramide (LacCer) to GM3 conversion in Chinese hamster ovary (CHO) cells was the early or late Golgi.
T5 393-760 Sentence denotes Our approach tested whether GM3 could be utilized as a substrate by GM2 synthase chimeras which were targeted to compartments earlier than the trans Golgi, i.e., GM3 produced in the cis Golgi should be utilized by GM2 synthase located anywhere in the Golgi whereas GM3 produced in the trans Golgi should only be used by GM2 synthase located in the trans Golgi or TGN.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T8 61-64 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T9 61-64 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T10 238-241 https://glytoucan.org/Structures/Glycans/G61168WC denotes GM2
T11 238-241 https://glytoucan.org/Structures/Glycans/G79389NT denotes GM2
T12 283-299 https://glytoucan.org/Structures/Glycans/G20420WT denotes lactosylceramide
T13 283-299 https://glytoucan.org/Structures/Glycans/G74621DY denotes lactosylceramide
T14 283-299 https://glytoucan.org/Structures/Glycans/G84224TW denotes lactosylceramide
T15 312-315 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T16 312-315 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T17 421-424 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T18 421-424 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T19 461-464 https://glytoucan.org/Structures/Glycans/G61168WC denotes GM2
T20 461-464 https://glytoucan.org/Structures/Glycans/G79389NT denotes GM2
T21 555-558 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T22 555-558 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T23 607-610 https://glytoucan.org/Structures/Glycans/G61168WC denotes GM2
T24 607-610 https://glytoucan.org/Structures/Glycans/G79389NT denotes GM2
T25 658-661 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T26 658-661 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T27 713-716 https://glytoucan.org/Structures/Glycans/G61168WC denotes GM2
T28 713-716 https://glytoucan.org/Structures/Glycans/G79389NT denotes GM2

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T2 283-299 http://www.glycoepitope.jp/epitopes/EP0078 denotes lactosylceramide
T3 301-307 http://www.glycoepitope.jp/epitopes/EP0078 denotes LacCer

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T17 137-142 FMAID:93672 denotes liver
_T18 137-142 FMAID:7197 denotes liver
_T19 226-237 FMAID:82816 denotes ganglioside
_T20 226-237 FMAID:196811 denotes ganglioside
_T21 283-299 FMAID:82821 denotes lactosylceramide
_T22 283-299 FMAID:196817 denotes lactosylceramide
_T23 346-351 FMAID:7209 denotes ovary
_T24 346-351 FMAID:93687 denotes ovary
_T25 358-363 FMAID:68646 denotes cells
_T26 358-363 FMAID:169002 denotes cells
_T27 406-412 FMAID:178661 denotes tested
_T28 506-518 FMAID:183399 denotes compartments
_T29 506-518 FMAID:76700 denotes compartments
_T30 506-518 FMAID:183854 denotes compartments

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 575-578 http://www.uniprot.org/uniprot/Q62225 denotes cis

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T2 183-187 http://purl.bioontology.org/ontology/NCBITAXON/8186 denotes late
T3 358-363 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T4 381-385 http://purl.bioontology.org/ontology/NCBITAXON/8186 denotes late
T5 575-578 http://purl.bioontology.org/ontology/NCBITAXON/245896 denotes cis

GO-BP

Id Subject Object Predicate Lexical cue
T4 163-172 http://purl.obolibrary.org/obo/GO_0051179 denotes localized
T5 353-356 http://purl.obolibrary.org/obo/GO_0043848 denotes CHO

GO-CC

Id Subject Object Predicate Lexical cue
T3 183-193 http://purl.obolibrary.org/obo/GO_0000138 denotes late Golgi
T4 183-193 http://purl.obolibrary.org/obo/GO_0005802 denotes late Golgi
T5 381-391 http://purl.obolibrary.org/obo/GO_0000138 denotes late Golgi
T6 381-391 http://purl.obolibrary.org/obo/GO_0005802 denotes late Golgi
T11 124-129 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T12 188-193 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T13 386-391 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T14 542-547 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T15 579-584 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T16 644-649 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T17 684-689 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T18 747-752 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T25 756-759 http://purl.obolibrary.org/obo/GO_0005802 denotes TGN
T26 358-363 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 137-142 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver

EDAM-topics

Id Subject Object Predicate Lexical cue
T2 494-502 http://edamontology.org/topic_0154 denotes targeted

EDAM-DFO

Id Subject Object Predicate Lexical cue
T4 31-38 http://edamontology.org/data_2048 denotes reports
T5 102-110 http://edamontology.org/operation_2423 denotes detected
T6 156-162 http://edamontology.org/data_2048 denotes report
T7 316-326 http://edamontology.org/operation_3434 denotes conversion

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 137-142 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver

GlycoBiology-Epitope

Id Subject Object Predicate Lexical cue
PD-GlycoEpitope-B_T2 283-299 http://www.glycoepitope.jp/epitopes/EP0078 denotes lactosylceramide

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 137-142 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 137-142 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T4 61-64 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T5 238-241 Glycan denotes GM2 https://api.glycosmos.org/wurcs2image/latest/png/binary/G79389NT
T6 283-299 Glycan denotes lactosylceramide https://api.glycosmos.org/wurcs2image/latest/png/binary/G84224TW
T7 301-307 Glycan denotes LacCer https://api.glycosmos.org/wurcs2image/latest/png/binary/G84224TW
T8 312-315 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T9 421-424 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T10 461-464 Glycan denotes GM2 https://api.glycosmos.org/wurcs2image/latest/png/binary/G79389NT
T11 555-558 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T12 607-610 Glycan denotes GM2 https://api.glycosmos.org/wurcs2image/latest/png/binary/G79389NT
T13 658-661 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T14 713-716 Glycan denotes GM2 https://api.glycosmos.org/wurcs2image/latest/png/binary/G79389NT

GlyCosmos15-NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 133-136 OrganismTaxon denotes rat 10114|10116
T3 330-345 OrganismTaxon denotes Chinese hamster 10029

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 124-129 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T4 137-142 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T5 188-193 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T6 346-351 Body_part denotes ovary http://purl.obolibrary.org/obo/UBERON_0000992
T7 386-391 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T8 542-547 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T9 579-584 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T10 644-649 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T11 684-689 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T12 747-752 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 137-142 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T3 0-194 Sentence denotes However, there are conflicting reports as to the location of GM3 synthase; originally this enzyme was detected in the early Golgi of rat liver but a recent report localized it to the late Golgi.
TextSentencer_T4 195-392 Sentence denotes We have used chimeric forms of ganglioside GM2 synthase to determine if the location of lactosylceramide (LacCer) to GM3 conversion in Chinese hamster ovary (CHO) cells was the early or late Golgi.
TextSentencer_T5 393-760 Sentence denotes Our approach tested whether GM3 could be utilized as a substrate by GM2 synthase chimeras which were targeted to compartments earlier than the trans Golgi, i.e., GM3 produced in the cis Golgi should be utilized by GM2 synthase located anywhere in the Golgi whereas GM3 produced in the trans Golgi should only be used by GM2 synthase located in the trans Golgi or TGN.
T3 0-760 Sentence denotes However, there are conflicting reports as to the location of GM3 synthase; originally this enzyme was detected in the early Golgi of rat liver but a recent report localized it to the late Golgi. We have used chimeric forms of ganglioside GM2 synthase to determine if the location of lactosylceramide (LacCer) to GM3 conversion in Chinese hamster ovary (CHO) cells was the early or late Golgi. Our approach tested whether GM3 could be utilized as a substrate by GM2 synthase chimeras which were targeted to compartments earlier than the trans Golgi, i.e., GM3 produced in the cis Golgi should be utilized by GM2 synthase located anywhere in the Golgi whereas GM3 produced in the trans Golgi should only be used by GM2 synthase located in the trans Golgi or TGN.
T3 0-194 Sentence denotes However, there are conflicting reports as to the location of GM3 synthase; originally this enzyme was detected in the early Golgi of rat liver but a recent report localized it to the late Golgi.
T4 195-392 Sentence denotes We have used chimeric forms of ganglioside GM2 synthase to determine if the location of lactosylceramide (LacCer) to GM3 conversion in Chinese hamster ovary (CHO) cells was the early or late Golgi.
T5 393-760 Sentence denotes Our approach tested whether GM3 could be utilized as a substrate by GM2 synthase chimeras which were targeted to compartments earlier than the trans Golgi, i.e., GM3 produced in the cis Golgi should be utilized by GM2 synthase located anywhere in the Golgi whereas GM3 produced in the trans Golgi should only be used by GM2 synthase located in the trans Golgi or TGN.

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T3 0-760 Sentence denotes However, there are conflicting reports as to the location of GM3 synthase; originally this enzyme was detected in the early Golgi of rat liver but a recent report localized it to the late Golgi. We have used chimeric forms of ganglioside GM2 synthase to determine if the location of lactosylceramide (LacCer) to GM3 conversion in Chinese hamster ovary (CHO) cells was the early or late Golgi. Our approach tested whether GM3 could be utilized as a substrate by GM2 synthase chimeras which were targeted to compartments earlier than the trans Golgi, i.e., GM3 produced in the cis Golgi should be utilized by GM2 synthase located anywhere in the Golgi whereas GM3 produced in the trans Golgi should only be used by GM2 synthase located in the trans Golgi or TGN.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T4 61-64 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T5 238-241 Glycan denotes GM2 https://api.glycosmos.org/wurcs2image/latest/png/binary/G79389NT
T6 283-299 Glycan denotes lactosylceramide https://api.glycosmos.org/wurcs2image/latest/png/binary/G84224TW
T7 301-307 Glycan denotes LacCer https://api.glycosmos.org/wurcs2image/latest/png/binary/G84224TW
T8 312-315 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T9 421-424 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T10 461-464 Glycan denotes GM2 https://api.glycosmos.org/wurcs2image/latest/png/binary/G79389NT
T11 555-558 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T12 607-610 Glycan denotes GM2 https://api.glycosmos.org/wurcs2image/latest/png/binary/G79389NT
T13 658-661 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T14 713-716 Glycan denotes GM2 https://api.glycosmos.org/wurcs2image/latest/png/binary/G79389NT

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T2 283-299 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes lactosylceramide http://www.glycoepitope.jp/epitopes/EP0078
T3 301-307 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes LacCer http://www.glycoepitope.jp/epitopes/EP0078

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 133-136 OrganismTaxon denotes rat 10114|10116
T3 330-345 OrganismTaxon denotes Chinese hamster 10029

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T2 283-299 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes lactosylceramide http://www.glycoepitope.jp/epitopes/EP0078
T3 301-307 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes LacCer http://www.glycoepitope.jp/epitopes/EP0078

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 124-129 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T4 137-142 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T5 188-193 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T6 346-351 Body_part denotes ovary http://purl.obolibrary.org/obo/UBERON_0000992
T7 386-391 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T8 542-547 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T9 579-584 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T10 644-649 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T11 684-689 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T12 747-752 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794