
PubMed:10986287
Annnotations
silkworm_phenotype
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18 | 113-120 | Gene:693047 | denotes | L-chain |
T17 | 104-111 | Gene:693030 | denotes | H-chain |
T16 | 677-687 | BMO_00587 | denotes | naked pupa |
T9 | 537-540 | Gene:100146105 | denotes | P25 |
T8 | 357-366 | Chemical:MESH:D004220 | denotes | disulfide |
T7 | 337-340 | Gene:100146105 | denotes | P25 |
T6 | 317-326 | Chemical:MESH:D004220 | denotes | disulfide |
T5 | 269-272 | Gene:100146105 | denotes | P25 |
T4 | 195-206 | Species:7091 | denotes | Bombyx mori |
T3 | 186-194 | Species:7091 | denotes | silkworm |
T2 | 126-129 | Gene:100146105 | denotes | P25 |
T13 | 1299-1302 | Gene:100146105 | denotes | P25 |
T12 | 1030-1033 | Gene:100146105 | denotes | P25 |
T11 | 771-774 | Gene:100146105 | denotes | P25 |
T10 | 700-707 | Species:7091 | denotes | B. mori |
T1 | 16-27 | Species:7091 | denotes | Bombyx mori |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-156 | Sentence | denotes | Silk fibroin of Bombyx mori is secreted, assembling a high molecular mass elementary unit consisting of H-chain, L-chain, and P25, with a 6:6:1 molar ratio. |
T2 | 157-273 | Sentence | denotes | Silk fibroin produced by the silkworm Bombyx mori consists of a heavy chain, a light chain, and a glycoprotein, P25. |
T3 | 274-425 | Sentence | denotes | The heavy and light chains are linked by a disulfide bond, and P25 associates with disulfide-linked heavy and light chains by noncovalent interactions. |
T4 | 426-632 | Sentence | denotes | Quantitative enzyme-linked immunosorbent assay revealed that molar ratios of the heavy chain, light chain, and P25 were 6:6:1, both in cocoons and in fibroin secreted into the lumen of posterior silk gland. |
T5 | 633-788 | Sentence | denotes | Trace amounts of fibroin produced by three "naked pupa" mutants of B. mori lacked the light chain, but the molar ratio of heavy chain and P25 was also 6:1. |
T6 | 789-1073 | Sentence | denotes | Gel filtration chromatography and sedimentation equilibrium analysis demonstrated that a large protein complex of approximately 2.3 MDa, designated an elementary unit of fibroin having 6:6:1 molar ratios of the heavy chain, light chain, and P25, existed in posterior silk gland cells. |
T7 | 1074-1393 | Sentence | denotes | Inaccessibility of biotinylated concanavalin A to the native elementary unit and partial dissociation of the elementary unit after incubation with excess N-glycosidase F or endoglycosidase H suggest that a single molecule of P25 is located internally and plays an important role in maintaining integrity of the complex. |
Glycosmos6-MAT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 626-631 | http://purl.obolibrary.org/obo/MAT_0000021 | denotes | gland |
T2 | 1061-1066 | http://purl.obolibrary.org/obo/MAT_0000021 | denotes | gland |
silkworm
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 16-27 | Species:7091 | denotes | Bombyx mori |
T2 | 126-129 | Gene:100146105 | denotes | P25 |
T3 | 186-194 | Species:7091 | denotes | silkworm |
T4 | 195-206 | Species:7091 | denotes | Bombyx mori |
T5 | 269-272 | Gene:100146105 | denotes | P25 |
T6 | 317-326 | Chemical:MESH:D004220 | denotes | disulfide |
T7 | 337-340 | Gene:100146105 | denotes | P25 |
T8 | 357-366 | Chemical:MESH:D004220 | denotes | disulfide |
T9 | 537-540 | Gene:100146105 | denotes | P25 |
T10 | 700-707 | Species:7091 | denotes | B. mori |
T11 | 771-774 | Gene:100146105 | denotes | P25 |
T12 | 1030-1033 | Gene:100146105 | denotes | P25 |
T13 | 1299-1302 | Gene:100146105 | denotes | P25 |
silkwormbase
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 16-27 | Species:7091 | denotes | Bombyx mori |
T10 | 700-707 | Species:7091 | denotes | B. mori |
T11 | 771-774 | Gene:100146105 | denotes | P25 |
T12 | 1030-1033 | Gene:100146105 | denotes | P25 |
T13 | 1299-1302 | Gene:100146105 | denotes | P25 |
T2 | 126-129 | Gene:100146105 | denotes | P25 |
T3 | 186-194 | Species:7091 | denotes | silkworm |
T4 | 195-206 | Species:7091 | denotes | Bombyx mori |
T5 | 269-272 | Gene:100146105 | denotes | P25 |
T6 | 317-326 | Chemical:MESH:D004220 | denotes | disulfide |
T7 | 337-340 | Gene:100146105 | denotes | P25 |
T8 | 357-366 | Chemical:MESH:D004220 | denotes | disulfide |
T9 | 537-540 | Gene:100146105 | denotes | P25 |
T16 | 677-687 | BMO_00587 | denotes | naked pupa |
T17 | 104-111 | Gene:693030 | denotes | H-chain |
T18 | 113-120 | Gene:693047 | denotes | L-chain |
NCBITAXON
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
T1 | 16-27 | OrganismTaxon | denotes | Bombyx mori | 7091 |
T2 | 186-194 | OrganismTaxon | denotes | silkworm | 7091 |
T3 | 195-206 | OrganismTaxon | denotes | Bombyx mori | 7091 |
T4 | 683-687 | OrganismTaxon | denotes | pupa | 96459 |
Anatomy-MAT
Id | Subject | Object | Predicate | Lexical cue | mat_id |
---|---|---|---|---|---|
T1 | 626-631 | Body_part | denotes | gland | http://purl.obolibrary.org/obo/MAT_0000021 |
T2 | 1061-1066 | Body_part | denotes | gland | http://purl.obolibrary.org/obo/MAT_0000021 |
Anatomy-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 0-4 | Body_part | denotes | Silk | http://purl.obolibrary.org/obo/UBERON_0012245 |
T2 | 144-149 | Body_part | denotes | molar | http://purl.obolibrary.org/obo/UBERON_0003655 |
T3 | 157-161 | Body_part | denotes | Silk | http://purl.obolibrary.org/obo/UBERON_0012245 |
T4 | 487-492 | Body_part | denotes | molar | http://purl.obolibrary.org/obo/UBERON_0003655 |
T5 | 602-607 | Body_part | denotes | lumen | http://purl.obolibrary.org/obo/UBERON_0000464 |
T6 | 611-620 | Body_part | denotes | posterior | http://purl.obolibrary.org/obo/UBERON_0001353 |
T7 | 621-631 | Body_part | denotes | silk gland | http://purl.obolibrary.org/obo/UBERON_0011146 |
T8 | 683-687 | Body_part | denotes | pupa | http://purl.obolibrary.org/obo/UBERON_0003143 |
T9 | 740-745 | Body_part | denotes | molar | http://purl.obolibrary.org/obo/UBERON_0003655 |
T10 | 980-985 | Body_part | denotes | molar | http://purl.obolibrary.org/obo/UBERON_0003655 |
T11 | 1046-1055 | Body_part | denotes | posterior | http://purl.obolibrary.org/obo/UBERON_0001353 |
T12 | 1056-1066 | Body_part | denotes | silk gland | http://purl.obolibrary.org/obo/UBERON_0011146 |