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bionlp-st-gro-2013-training

Id Subject Object Predicate Lexical cue
T1 4-36 Protein denotes fragile X-related proteins FXR1P
T2 41-46 Protein denotes FXR2P
T3 68-77 Nucleus denotes nucleolar
T5 113-118 Virus denotes HIV-1
T8 191-227 Protein denotes fragile X mental-retardation protein
T9 229-233 Protein denotes FMRP
T10 236-240 Protein denotes FMRP
T11 249-283 Protein denotes fragile X-related proteins 1 and 2
T13 285-290 Protein denotes FXR1P
T14 295-300 Protein denotes FXR2P
T15 309-320 Gene denotes gene family
T16 359-362 RNA denotes RNA
T18 372-385 Ribosome denotes polyribosomal
T20 402-419 CellComponent denotes nucleocytoplasmic
T22 466-470 Protein denotes FMRP
T23 475-480 Protein denotes FXR1P
T25 497-506 CellComponent denotes cytoplasm
T26 511-522 CellComponent denotes nucleoplasm
T27 530-535 Protein denotes FXR2P
T29 553-562 CellComponent denotes cytoplasm
T30 567-576 CellComponent denotes nucleolus
T31 582-589 Nucleus denotes nuclear
T32 594-603 CellComponent denotes nucleolar
T34 634-642 Protein denotes proteins
T35 689-694 Protein denotes FXR2P
T36 747-758 AminoAcid denotes amino acids
T37 794-803 CellComponent denotes nucleolar
T38 834-839 Virus denotes viral
T39 840-851 Protein denotes protein Rev
T40 901-905 Exon denotes exon
T41 916-925 Gene denotes FXR1 gene
T42 932-936 Exon denotes exon
T44 1013-1027 Protein denotes FXR1P isoforms
T45 1087-1101 Protein denotes FXR1P isoforms
T46 1205-1212 Nucleus denotes nuclear
T49 1230-1242 Lipid denotes leptomycin-B
T50 1249-1254 Protein denotes iso-e
T51 1259-1264 Protein denotes iso-f
T52 1274-1283 CellComponent denotes nucleolar
T54 1314-1319 Protein denotes FXR2P
T55 1321-1326 Protein denotes iso-d
T56 1347-1359 CellComponent denotes nucleo-plasm
T57 1372-1380 CellComponent denotes nucleoli
T58 1464-1469 Protein denotes FXR1P
T59 1483-1488 Eukaryote denotes human
T60 1489-1508 Cell denotes fibroblast cultures
T62 1615-1620 Protein denotes FXR2P
T63 1625-1630 Protein denotes FXR1P
T65 1755-1769 Protein denotes FXR1P isoforms
T66 1788-1801 Protein denotes FMRP isoforms
T67 1846-1864 Protein denotes family of proteins
T69 1914-1921 Tissue denotes tissues
T70 88-94 Peptide denotes signal
T71 814-820 Peptide denotes signal
T72 822-825 Peptide denotes NoS
T6 119-138 Protein denotes regulatory proteins
T73 1159-1162 Peptide denotes NoS
T74 1178-1187 Cell denotes COS cells
T75 1428-1435 Peptide denotes peptide
T76 1457-1460 Peptide denotes NoS
T77 1683-1686 Peptide denotes NoS
T78 1706-1723 ProteinDomain denotes C-terminal region
T79 1517-1526 CellComponent denotes nucleolar
E1 78-87 ProteinTargeting denotes targeting
E2 140-158 Disease denotes Fragile X syndrome
E3 363-370 BindingToRNA denotes binding
E4 386-397 Binding denotes association
E5 420-429 Transport denotes shuttling
E6 481-488 Transport denotes shuttle
E7 536-544 Transport denotes shuttles
E8 604-613 ProteinTargeting denotes targeting
E9 947-967 RNASplicing denotes alternative splicing
E10 1213-1219 Transport denotes export
E11 1220-1229 NegativeRegulation denotes inhibitor
E12 1284-1296 Localization denotes localization
E13 1586-1611 Localization denotes intranuclear distribution
E14 1661-1669 RegulatoryProcess denotes mediated
E15 1886-1900 RNAMetabolism denotes RNA metabolism
E16 804-813 ProteinTargeting denotes targeting
E17 1527-1533 Localization denotes signal
E18 1284-1296 Localization denotes localization
E19 1586-1611 Localization denotes intranuclear distribution
E20 1661-1669 RegulatoryProcess denotes mediated
E21 481-488 Transport denotes shuttle
R1 E1 T3 locatedIn targeting,nucleolar
R3 E5 T20 locatedIn shuttling,nucleocytoplasmic
R4 E6 T25 locatedIn shuttle,cytoplasm
R5 E6 T26 locatedIn shuttle,nucleoplasm
R6 E7 T29 locatedIn shuttles,cytoplasm
R7 E7 T30 locatedIn shuttles,nucleolus
R8 E8 T31 locatedIn targeting,nuclear
R9 E8 T32 locatedIn targeting,nucleolar
R10 T35 T36 hasPart FXR2P,amino acids
R11 T39 T38 fromSpecies protein Rev,viral
R12 T41 T40 hasPart FXR1 gene,exon
R13 T44 T42 hasPart FXR1P isoforms,exon
R15 E12 T52 locatedIn localization,nucleolar
R16 T55 T56 locatedIn iso-d,nucleo-plasm
R17 T60 T59 fromSpecies fibroblast cultures,human
R18 E15 T69 locatedIn RNA metabolism,tissues
R19 T2 T70 hasPart FXR2P,signal
R20 T1 T70 hasPart fragile X-related proteins FXR1P,signal
R21 E16 T37 locatedIn targeting,nucleolar
R2 T6 T5 fromSpecies regulatory proteins,HIV-1
R22 T45 T74 locatedIn FXR1P isoforms,COS cells
R14 T58 T76 hasPart FXR1P,NoS
R23 T78 T77 hasPart C-terminal region,NoS
R24 E17 T79 locatedIn signal,nucleolar
R25 E21 T25 locatedIn shuttle,cytoplasm
R26 E21 T26 locatedIn shuttle,nucleoplasm
R28 T16 E3 hasPatient RNA,binding
R29 T18 E4 hasPatient polyribosomal,association
R30 T22 E6 hasPatient FMRP,shuttle
R31 T27 E7 hasPatient FXR2P,shuttles
R32 T34 E8 hasPatient proteins,targeting
R33 T42 E9 hasPatient exon,alternative splicing
R34 T49 E11 hasAgent leptomycin-B,inhibitor
R35 E10 E11 hasPatient export,inhibitor
R36 T50 E12 hasPatient iso-e,localization
R37 T62 E13 hasPatient FXR2P,intranuclear distribution
R38 T77 E14 hasAgent NoS,mediated
R39 E13 E14 hasPatient intranuclear distribution,mediated
R40 T71 E16 hasAgent signal,targeting
R41 T51 E18 hasPatient iso-f,localization
R42 T63 E19 hasPatient FXR1P,intranuclear distribution
R43 T77 E20 hasAgent NoS,mediated
R44 E19 E20 hasPatient intranuclear distribution,mediated
R45 T23 E21 hasPatient FXR1P,shuttle

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 201-219 HP_0001249 denotes mental-retardation

DisGeNET

Id Subject Object Predicate Lexical cue
T0 229-233 gene:2332 denotes FMRP
T1 140-158 disease:C0016667 denotes Fragile X syndrome
R1 T0 T1 associated_with FMRP,Fragile X syndrome