PubMed:10814704 JSONTXT

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    GlyCosmos6-UBERON

    {"project":"GlyCosmos6-UBERON","denotations":[{"id":"T1","span":{"begin":134,"end":138},"obj":"Body_part"},{"id":"T2","span":{"begin":1072,"end":1079},"obj":"Body_part"},{"id":"T3","span":{"begin":1400,"end":1404},"obj":"Body_part"},{"id":"T4","span":{"begin":1589,"end":1593},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CL_0000000"},{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0000062"},{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CL_0000000"},{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/CL_0000000"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    Glycan-Motif

    {"project":"Glycan-Motif","denotations":[{"id":"T1","span":{"begin":557,"end":562},"obj":"https://glytoucan.org/Structures/Glycans/G01187XC"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    GlyCosmos600-Glycan-Motif-Structure

    {"project":"GlyCosmos600-Glycan-Motif-Structure","denotations":[{"id":"T1","span":{"begin":557,"end":562},"obj":"https://glytoucan.org/Structures/Glycans/G01187XC"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    GlyCosmos600-CLO

    {"project":"GlyCosmos600-CLO","denotations":[{"id":"T1","span":{"begin":128,"end":133},"obj":"http://purl.obolibrary.org/obo/CLO_0051934"},{"id":"T2","span":{"begin":128,"end":133},"obj":"http://purl.obolibrary.org/obo/CLO_0051933"},{"id":"T3","span":{"begin":128,"end":133},"obj":"http://purl.obolibrary.org/obo/CLO_0051932"},{"id":"T4","span":{"begin":128,"end":133},"obj":"http://purl.obolibrary.org/obo/CLO_0051930"},{"id":"T5","span":{"begin":128,"end":133},"obj":"http://purl.obolibrary.org/obo/CLO_0003775"},{"id":"T6","span":{"begin":134,"end":138},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T7","span":{"begin":271,"end":276},"obj":"http://purl.obolibrary.org/obo/CLO_0051934"},{"id":"T8","span":{"begin":271,"end":276},"obj":"http://purl.obolibrary.org/obo/CLO_0051933"},{"id":"T9","span":{"begin":271,"end":276},"obj":"http://purl.obolibrary.org/obo/CLO_0051932"},{"id":"T10","span":{"begin":271,"end":276},"obj":"http://purl.obolibrary.org/obo/CLO_0051930"},{"id":"T11","span":{"begin":271,"end":276},"obj":"http://purl.obolibrary.org/obo/CLO_0003775"},{"id":"T12","span":{"begin":565,"end":570},"obj":"http://purl.obolibrary.org/obo/CLO_0051934"},{"id":"T13","span":{"begin":565,"end":570},"obj":"http://purl.obolibrary.org/obo/CLO_0051933"},{"id":"T14","span":{"begin":565,"end":570},"obj":"http://purl.obolibrary.org/obo/CLO_0051932"},{"id":"T15","span":{"begin":565,"end":570},"obj":"http://purl.obolibrary.org/obo/CLO_0051930"},{"id":"T16","span":{"begin":565,"end":570},"obj":"http://purl.obolibrary.org/obo/CLO_0003775"},{"id":"T17","span":{"begin":571,"end":576},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T18","span":{"begin":700,"end":705},"obj":"http://purl.obolibrary.org/obo/CLO_0051934"},{"id":"T19","span":{"begin":700,"end":705},"obj":"http://purl.obolibrary.org/obo/CLO_0051933"},{"id":"T20","span":{"begin":700,"end":705},"obj":"http://purl.obolibrary.org/obo/CLO_0051932"},{"id":"T21","span":{"begin":700,"end":705},"obj":"http://purl.obolibrary.org/obo/CLO_0051930"},{"id":"T22","span":{"begin":700,"end":705},"obj":"http://purl.obolibrary.org/obo/CLO_0003775"},{"id":"T23","span":{"begin":706,"end":711},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T24","span":{"begin":1342,"end":1347},"obj":"http://purl.obolibrary.org/obo/CLO_0051934"},{"id":"T25","span":{"begin":1342,"end":1347},"obj":"http://purl.obolibrary.org/obo/CLO_0051933"},{"id":"T26","span":{"begin":1342,"end":1347},"obj":"http://purl.obolibrary.org/obo/CLO_0051932"},{"id":"T27","span":{"begin":1342,"end":1347},"obj":"http://purl.obolibrary.org/obo/CLO_0051930"},{"id":"T28","span":{"begin":1342,"end":1347},"obj":"http://purl.obolibrary.org/obo/CLO_0003775"},{"id":"T29","span":{"begin":1348,"end":1353},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T30","span":{"begin":1394,"end":1399},"obj":"http://purl.obolibrary.org/obo/CLO_0051934"},{"id":"T31","span":{"begin":1394,"end":1399},"obj":"http://purl.obolibrary.org/obo/CLO_0051933"},{"id":"T32","span":{"begin":1394,"end":1399},"obj":"http://purl.obolibrary.org/obo/CLO_0051932"},{"id":"T33","span":{"begin":1394,"end":1399},"obj":"http://purl.obolibrary.org/obo/CLO_0051930"},{"id":"T34","span":{"begin":1394,"end":1399},"obj":"http://purl.obolibrary.org/obo/CLO_0003775"},{"id":"T35","span":{"begin":1400,"end":1404},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T36","span":{"begin":1583,"end":1588},"obj":"http://purl.obolibrary.org/obo/CLO_0051934"},{"id":"T37","span":{"begin":1583,"end":1588},"obj":"http://purl.obolibrary.org/obo/CLO_0051933"},{"id":"T38","span":{"begin":1583,"end":1588},"obj":"http://purl.obolibrary.org/obo/CLO_0051932"},{"id":"T39","span":{"begin":1583,"end":1588},"obj":"http://purl.obolibrary.org/obo/CLO_0051930"},{"id":"T40","span":{"begin":1583,"end":1588},"obj":"http://purl.obolibrary.org/obo/CLO_0003775"},{"id":"T41","span":{"begin":1589,"end":1593},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    NCBITAXON

    {"project":"NCBITAXON","denotations":[{"id":"T1","span":{"begin":30,"end":35},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"NCBItxid:9606"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    GlyCosmos6-Glycan-Motif-Image

    {"project":"GlyCosmos6-Glycan-Motif-Image","denotations":[{"id":"T1","span":{"begin":557,"end":562},"obj":"Glycan_Motif"}],"attributes":[{"id":"A1","pred":"image","subj":"T1","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    GlyCosmos6-Glycan-Motif-Structure

    {"project":"GlyCosmos6-Glycan-Motif-Structure","denotations":[{"id":"T1","span":{"begin":557,"end":562},"obj":"https://glytoucan.org/Structures/Glycans/G01187XC"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    sentences

    {"project":"sentences","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":144},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":145,"end":432},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":433,"end":482},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":483,"end":577},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":578,"end":712},"obj":"Sentence"},{"id":"TextSentencer_T6","span":{"begin":713,"end":879},"obj":"Sentence"},{"id":"TextSentencer_T7","span":{"begin":880,"end":1066},"obj":"Sentence"},{"id":"TextSentencer_T8","span":{"begin":1067,"end":1199},"obj":"Sentence"},{"id":"TextSentencer_T9","span":{"begin":1200,"end":1354},"obj":"Sentence"},{"id":"TextSentencer_T10","span":{"begin":1355,"end":1439},"obj":"Sentence"},{"id":"TextSentencer_T11","span":{"begin":1440,"end":1610},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":144},"obj":"Sentence"},{"id":"T2","span":{"begin":145,"end":432},"obj":"Sentence"},{"id":"T3","span":{"begin":433,"end":482},"obj":"Sentence"},{"id":"T4","span":{"begin":483,"end":577},"obj":"Sentence"},{"id":"T5","span":{"begin":578,"end":712},"obj":"Sentence"},{"id":"T6","span":{"begin":713,"end":879},"obj":"Sentence"},{"id":"T7","span":{"begin":880,"end":1066},"obj":"Sentence"},{"id":"T8","span":{"begin":1067,"end":1199},"obj":"Sentence"},{"id":"T9","span":{"begin":1200,"end":1354},"obj":"Sentence"},{"id":"T10","span":{"begin":1355,"end":1439},"obj":"Sentence"},{"id":"T11","span":{"begin":1440,"end":1610},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    GlyCosmos6-CLO

    {"project":"GlyCosmos6-CLO","denotations":[{"id":"T1","span":{"begin":128,"end":133},"obj":"http://purl.obolibrary.org/obo/CLO_0003775"},{"id":"T2","span":{"begin":128,"end":133},"obj":"http://purl.obolibrary.org/obo/CLO_0051930"},{"id":"T3","span":{"begin":128,"end":133},"obj":"http://purl.obolibrary.org/obo/CLO_0051932"},{"id":"T4","span":{"begin":128,"end":133},"obj":"http://purl.obolibrary.org/obo/CLO_0051933"},{"id":"T5","span":{"begin":128,"end":133},"obj":"http://purl.obolibrary.org/obo/CLO_0051934"},{"id":"T6","span":{"begin":134,"end":138},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T7","span":{"begin":271,"end":276},"obj":"http://purl.obolibrary.org/obo/CLO_0003775"},{"id":"T8","span":{"begin":271,"end":276},"obj":"http://purl.obolibrary.org/obo/CLO_0051930"},{"id":"T9","span":{"begin":271,"end":276},"obj":"http://purl.obolibrary.org/obo/CLO_0051932"},{"id":"T10","span":{"begin":271,"end":276},"obj":"http://purl.obolibrary.org/obo/CLO_0051933"},{"id":"T11","span":{"begin":271,"end":276},"obj":"http://purl.obolibrary.org/obo/CLO_0051934"},{"id":"T12","span":{"begin":565,"end":570},"obj":"http://purl.obolibrary.org/obo/CLO_0003775"},{"id":"T13","span":{"begin":565,"end":570},"obj":"http://purl.obolibrary.org/obo/CLO_0051930"},{"id":"T14","span":{"begin":565,"end":570},"obj":"http://purl.obolibrary.org/obo/CLO_0051932"},{"id":"T15","span":{"begin":565,"end":570},"obj":"http://purl.obolibrary.org/obo/CLO_0051933"},{"id":"T16","span":{"begin":565,"end":570},"obj":"http://purl.obolibrary.org/obo/CLO_0051934"},{"id":"T17","span":{"begin":571,"end":576},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T18","span":{"begin":700,"end":705},"obj":"http://purl.obolibrary.org/obo/CLO_0003775"},{"id":"T19","span":{"begin":700,"end":705},"obj":"http://purl.obolibrary.org/obo/CLO_0051930"},{"id":"T20","span":{"begin":700,"end":705},"obj":"http://purl.obolibrary.org/obo/CLO_0051932"},{"id":"T21","span":{"begin":700,"end":705},"obj":"http://purl.obolibrary.org/obo/CLO_0051933"},{"id":"T22","span":{"begin":700,"end":705},"obj":"http://purl.obolibrary.org/obo/CLO_0051934"},{"id":"T23","span":{"begin":706,"end":711},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T24","span":{"begin":1330,"end":1338},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T25","span":{"begin":1342,"end":1347},"obj":"http://purl.obolibrary.org/obo/CLO_0003775"},{"id":"T26","span":{"begin":1342,"end":1347},"obj":"http://purl.obolibrary.org/obo/CLO_0051930"},{"id":"T27","span":{"begin":1342,"end":1347},"obj":"http://purl.obolibrary.org/obo/CLO_0051932"},{"id":"T28","span":{"begin":1342,"end":1347},"obj":"http://purl.obolibrary.org/obo/CLO_0051933"},{"id":"T29","span":{"begin":1342,"end":1347},"obj":"http://purl.obolibrary.org/obo/CLO_0051934"},{"id":"T30","span":{"begin":1348,"end":1353},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T31","span":{"begin":1364,"end":1372},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T32","span":{"begin":1394,"end":1399},"obj":"http://purl.obolibrary.org/obo/CLO_0003775"},{"id":"T33","span":{"begin":1394,"end":1399},"obj":"http://purl.obolibrary.org/obo/CLO_0051930"},{"id":"T34","span":{"begin":1394,"end":1399},"obj":"http://purl.obolibrary.org/obo/CLO_0051932"},{"id":"T35","span":{"begin":1394,"end":1399},"obj":"http://purl.obolibrary.org/obo/CLO_0051933"},{"id":"T36","span":{"begin":1394,"end":1399},"obj":"http://purl.obolibrary.org/obo/CLO_0051934"},{"id":"T37","span":{"begin":1400,"end":1404},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T38","span":{"begin":1583,"end":1588},"obj":"http://purl.obolibrary.org/obo/CLO_0003775"},{"id":"T39","span":{"begin":1583,"end":1588},"obj":"http://purl.obolibrary.org/obo/CLO_0051930"},{"id":"T40","span":{"begin":1583,"end":1588},"obj":"http://purl.obolibrary.org/obo/CLO_0051932"},{"id":"T41","span":{"begin":1583,"end":1588},"obj":"http://purl.obolibrary.org/obo/CLO_0051933"},{"id":"T42","span":{"begin":1583,"end":1588},"obj":"http://purl.obolibrary.org/obo/CLO_0051934"},{"id":"T43","span":{"begin":1589,"end":1593},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    GlycoBiology-FMA

    {"project":"GlycoBiology-FMA","denotations":[{"id":"_T1","span":{"begin":93,"end":97},"obj":"FMAID:198663"},{"id":"_T2","span":{"begin":422,"end":426},"obj":"FMAID:198073"},{"id":"_T3","span":{"begin":422,"end":426},"obj":"FMAID:84120"},{"id":"_T4","span":{"begin":571,"end":576},"obj":"FMAID:68646"},{"id":"_T5","span":{"begin":571,"end":576},"obj":"FMAID:169002"},{"id":"_T6","span":{"begin":656,"end":660},"obj":"FMAID:198663"},{"id":"_T7","span":{"begin":706,"end":711},"obj":"FMAID:68646"},{"id":"_T8","span":{"begin":706,"end":711},"obj":"FMAID:169002"},{"id":"_T9","span":{"begin":759,"end":763},"obj":"FMAID:198663"},{"id":"_T10","span":{"begin":780,"end":787},"obj":"FMAID:84116"},{"id":"_T11","span":{"begin":780,"end":787},"obj":"FMAID:198062"},{"id":"_T12","span":{"begin":982,"end":992},"obj":"FMAID:82740"},{"id":"_T13","span":{"begin":982,"end":992},"obj":"FMAID:196729"},{"id":"_T14","span":{"begin":1054,"end":1061},"obj":"FMAID:198062"},{"id":"_T15","span":{"begin":1054,"end":1061},"obj":"FMAID:84116"},{"id":"_T16","span":{"begin":1348,"end":1353},"obj":"FMAID:68646"},{"id":"_T17","span":{"begin":1348,"end":1353},"obj":"FMAID:169002"},{"id":"_T18","span":{"begin":1571,"end":1575},"obj":"FMAID:198663"}],"namespaces":[{"prefix":"FMAID","uri":"http://purl.org/sig/ont/fma/fma"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    uniprot-human

    {"project":"uniprot-human","denotations":[{"id":"T1","span":{"begin":61,"end":80},"obj":"http://www.uniprot.org/uniprot/Q8IX54"},{"id":"T2","span":{"begin":128,"end":130},"obj":"http://www.uniprot.org/uniprot/P11150"},{"id":"T3","span":{"begin":271,"end":273},"obj":"http://www.uniprot.org/uniprot/P11150"},{"id":"T4","span":{"begin":565,"end":567},"obj":"http://www.uniprot.org/uniprot/P11150"},{"id":"T5","span":{"begin":700,"end":702},"obj":"http://www.uniprot.org/uniprot/P11150"},{"id":"T6","span":{"begin":1342,"end":1344},"obj":"http://www.uniprot.org/uniprot/P11150"},{"id":"T7","span":{"begin":1394,"end":1396},"obj":"http://www.uniprot.org/uniprot/P11150"},{"id":"T8","span":{"begin":1583,"end":1585},"obj":"http://www.uniprot.org/uniprot/P11150"},{"id":"T9","span":{"begin":128,"end":130},"obj":"http://www.uniprot.org/uniprot/P35914"},{"id":"T10","span":{"begin":271,"end":273},"obj":"http://www.uniprot.org/uniprot/P35914"},{"id":"T11","span":{"begin":565,"end":567},"obj":"http://www.uniprot.org/uniprot/P35914"},{"id":"T12","span":{"begin":700,"end":702},"obj":"http://www.uniprot.org/uniprot/P35914"},{"id":"T13","span":{"begin":1342,"end":1344},"obj":"http://www.uniprot.org/uniprot/P35914"},{"id":"T14","span":{"begin":1394,"end":1396},"obj":"http://www.uniprot.org/uniprot/P35914"},{"id":"T15","span":{"begin":1583,"end":1585},"obj":"http://www.uniprot.org/uniprot/P35914"},{"id":"T16","span":{"begin":128,"end":130},"obj":"http://www.uniprot.org/uniprot/Q14469"},{"id":"T17","span":{"begin":271,"end":273},"obj":"http://www.uniprot.org/uniprot/Q14469"},{"id":"T18","span":{"begin":565,"end":567},"obj":"http://www.uniprot.org/uniprot/Q14469"},{"id":"T19","span":{"begin":700,"end":702},"obj":"http://www.uniprot.org/uniprot/Q14469"},{"id":"T20","span":{"begin":1342,"end":1344},"obj":"http://www.uniprot.org/uniprot/Q14469"},{"id":"T21","span":{"begin":1394,"end":1396},"obj":"http://www.uniprot.org/uniprot/Q14469"},{"id":"T22","span":{"begin":1583,"end":1585},"obj":"http://www.uniprot.org/uniprot/Q14469"},{"id":"T23","span":{"begin":383,"end":385},"obj":"http://www.uniprot.org/uniprot/P09131"},{"id":"T24","span":{"begin":810,"end":812},"obj":"http://www.uniprot.org/uniprot/P09131"},{"id":"T25","span":{"begin":1029,"end":1031},"obj":"http://www.uniprot.org/uniprot/P09131"},{"id":"T26","span":{"begin":1119,"end":1121},"obj":"http://www.uniprot.org/uniprot/Q6I9R6"},{"id":"T27","span":{"begin":1467,"end":1469},"obj":"http://www.uniprot.org/uniprot/Q6I9R6"},{"id":"T28","span":{"begin":1119,"end":1121},"obj":"http://www.uniprot.org/uniprot/P38435"},{"id":"T29","span":{"begin":1467,"end":1469},"obj":"http://www.uniprot.org/uniprot/P38435"},{"id":"T30","span":{"begin":1119,"end":1121},"obj":"http://www.uniprot.org/uniprot/P02774"},{"id":"T31","span":{"begin":1467,"end":1469},"obj":"http://www.uniprot.org/uniprot/P02774"},{"id":"T32","span":{"begin":1155,"end":1160},"obj":"http://www.uniprot.org/uniprot/Q9BPV1"},{"id":"T33","span":{"begin":1237,"end":1242},"obj":"http://www.uniprot.org/uniprot/Q9BPV1"},{"id":"T34","span":{"begin":1284,"end":1289},"obj":"http://www.uniprot.org/uniprot/Q9BPV1"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    uniprot-mouse

    {"project":"uniprot-mouse","denotations":[{"id":"T1","span":{"begin":61,"end":80},"obj":"http://www.uniprot.org/uniprot/P97325"},{"id":"T2","span":{"begin":128,"end":130},"obj":"http://www.uniprot.org/uniprot/P27656"},{"id":"T3","span":{"begin":271,"end":273},"obj":"http://www.uniprot.org/uniprot/P27656"},{"id":"T4","span":{"begin":565,"end":567},"obj":"http://www.uniprot.org/uniprot/P27656"},{"id":"T5","span":{"begin":700,"end":702},"obj":"http://www.uniprot.org/uniprot/P27656"},{"id":"T6","span":{"begin":1342,"end":1344},"obj":"http://www.uniprot.org/uniprot/P27656"},{"id":"T7","span":{"begin":1394,"end":1396},"obj":"http://www.uniprot.org/uniprot/P27656"},{"id":"T8","span":{"begin":1583,"end":1585},"obj":"http://www.uniprot.org/uniprot/P27656"},{"id":"T9","span":{"begin":128,"end":130},"obj":"http://www.uniprot.org/uniprot/P38060"},{"id":"T10","span":{"begin":271,"end":273},"obj":"http://www.uniprot.org/uniprot/P38060"},{"id":"T11","span":{"begin":565,"end":567},"obj":"http://www.uniprot.org/uniprot/P38060"},{"id":"T12","span":{"begin":700,"end":702},"obj":"http://www.uniprot.org/uniprot/P38060"},{"id":"T13","span":{"begin":1342,"end":1344},"obj":"http://www.uniprot.org/uniprot/P38060"},{"id":"T14","span":{"begin":1394,"end":1396},"obj":"http://www.uniprot.org/uniprot/P38060"},{"id":"T15","span":{"begin":1583,"end":1585},"obj":"http://www.uniprot.org/uniprot/P38060"},{"id":"T16","span":{"begin":383,"end":385},"obj":"http://www.uniprot.org/uniprot/P21129"},{"id":"T17","span":{"begin":810,"end":812},"obj":"http://www.uniprot.org/uniprot/P21129"},{"id":"T18","span":{"begin":1029,"end":1031},"obj":"http://www.uniprot.org/uniprot/P21129"},{"id":"T19","span":{"begin":1001,"end":1003},"obj":"http://www.uniprot.org/uniprot/Q99PJ0"},{"id":"T20","span":{"begin":1114,"end":1117},"obj":"http://www.uniprot.org/uniprot/Q76LW6"},{"id":"T21","span":{"begin":1229,"end":1232},"obj":"http://www.uniprot.org/uniprot/Q76LW6"},{"id":"T22","span":{"begin":1265,"end":1268},"obj":"http://www.uniprot.org/uniprot/Q76LW6"},{"id":"T23","span":{"begin":1114,"end":1117},"obj":"http://www.uniprot.org/uniprot/O89090"},{"id":"T24","span":{"begin":1229,"end":1232},"obj":"http://www.uniprot.org/uniprot/O89090"},{"id":"T25","span":{"begin":1265,"end":1268},"obj":"http://www.uniprot.org/uniprot/O89090"},{"id":"T26","span":{"begin":1155,"end":1160},"obj":"http://www.uniprot.org/uniprot/Q9WTZ4"},{"id":"T27","span":{"begin":1237,"end":1242},"obj":"http://www.uniprot.org/uniprot/Q9WTZ4"},{"id":"T28","span":{"begin":1284,"end":1289},"obj":"http://www.uniprot.org/uniprot/Q9WTZ4"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    GlycoBiology-NCBITAXON

    {"project":"GlycoBiology-NCBITAXON","denotations":[{"id":"T1","span":{"begin":36,"end":40},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/3554"},{"id":"T2","span":{"begin":36,"end":40},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/158455"},{"id":"T3","span":{"begin":193,"end":197},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/3554"},{"id":"T4","span":{"begin":193,"end":197},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/158455"},{"id":"T5","span":{"begin":571,"end":576},"obj":"http://purl.bioontology.org/ontology/STY/T025"},{"id":"T6","span":{"begin":706,"end":711},"obj":"http://purl.bioontology.org/ontology/STY/T025"},{"id":"T7","span":{"begin":1348,"end":1353},"obj":"http://purl.bioontology.org/ontology/STY/T025"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T1","span":{"begin":0,"end":15},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T2","span":{"begin":341,"end":356},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T3","span":{"begin":616,"end":631},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T4","span":{"begin":1314,"end":1329},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T5","span":{"begin":1527,"end":1542},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T6","span":{"begin":16,"end":26},"obj":"http://purl.obolibrary.org/obo/GO_0065007"},{"id":"T7","span":{"begin":357,"end":367},"obj":"http://purl.obolibrary.org/obo/GO_0065007"},{"id":"T8","span":{"begin":487,"end":497},"obj":"http://purl.obolibrary.org/obo/GO_0065007"},{"id":"T9","span":{"begin":632,"end":642},"obj":"http://purl.obolibrary.org/obo/GO_0065007"},{"id":"T10","span":{"begin":1543,"end":1553},"obj":"http://purl.obolibrary.org/obo/GO_0065007"},{"id":"T11","span":{"begin":341,"end":375},"obj":"http://purl.obolibrary.org/obo/GO_0006355"},{"id":"T12","span":{"begin":443,"end":445},"obj":"http://purl.obolibrary.org/obo/GO_0004306"},{"id":"T13","span":{"begin":550,"end":556},"obj":"http://purl.obolibrary.org/obo/GO_0097503"},{"id":"T14","span":{"begin":759,"end":774},"obj":"http://purl.obolibrary.org/obo/GO_0010467"},{"id":"T15","span":{"begin":1400,"end":1420},"obj":"http://purl.obolibrary.org/obo/GO_0030154"},{"id":"T16","span":{"begin":1589,"end":1609},"obj":"http://purl.obolibrary.org/obo/GO_0030154"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T1","span":{"begin":134,"end":138},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T2","span":{"begin":1400,"end":1404},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T3","span":{"begin":571,"end":576},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T4","span":{"begin":706,"end":711},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T5","span":{"begin":1348,"end":1353},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    EDAM-topics

    {"project":"EDAM-topics","denotations":[{"id":"T1","span":{"begin":0,"end":15},"obj":"http://edamontology.org/topic_3308"},{"id":"T2","span":{"begin":0,"end":15},"obj":"http://edamontology.org/topic_3512"},{"id":"T3","span":{"begin":0,"end":15},"obj":"http://edamontology.org/topic_0110"},{"id":"T4","span":{"begin":0,"end":15},"obj":"http://edamontology.org/topic_0203"},{"id":"T5","span":{"begin":30,"end":35},"obj":"http://edamontology.org/topic_2815"},{"id":"T6","span":{"begin":341,"end":356},"obj":"http://edamontology.org/topic_3512"},{"id":"T7","span":{"begin":341,"end":356},"obj":"http://edamontology.org/topic_0110"},{"id":"T8","span":{"begin":341,"end":356},"obj":"http://edamontology.org/topic_0203"},{"id":"T9","span":{"begin":341,"end":356},"obj":"http://edamontology.org/topic_3308"},{"id":"T10","span":{"begin":386,"end":394},"obj":"http://edamontology.org/topic_0749"},{"id":"T11","span":{"begin":386,"end":394},"obj":"http://edamontology.org/topic_0111"},{"id":"T12","span":{"begin":386,"end":394},"obj":"http://edamontology.org/topic_1312"},{"id":"T13","span":{"begin":422,"end":426},"obj":"http://edamontology.org/topic_2397"},{"id":"T14","span":{"begin":422,"end":426},"obj":"http://edamontology.org/topic_3512"},{"id":"T15","span":{"begin":604,"end":611},"obj":"http://edamontology.org/topic_3678"},{"id":"T16","span":{"begin":616,"end":631},"obj":"http://edamontology.org/topic_0203"},{"id":"T17","span":{"begin":616,"end":631},"obj":"http://edamontology.org/topic_3308"},{"id":"T18","span":{"begin":616,"end":631},"obj":"http://edamontology.org/topic_3512"},{"id":"T19","span":{"begin":616,"end":631},"obj":"http://edamontology.org/topic_0110"},{"id":"T20","span":{"begin":759,"end":774},"obj":"http://edamontology.org/topic_0203"},{"id":"T21","span":{"begin":780,"end":787},"obj":"http://edamontology.org/topic_0622"},{"id":"T22","span":{"begin":813,"end":821},"obj":"http://edamontology.org/topic_1312"},{"id":"T23","span":{"begin":813,"end":821},"obj":"http://edamontology.org/topic_0111"},{"id":"T24","span":{"begin":813,"end":821},"obj":"http://edamontology.org/topic_0749"},{"id":"T25","span":{"begin":922,"end":936},"obj":"http://edamontology.org/topic_0659"},{"id":"T26","span":{"begin":1032,"end":1040},"obj":"http://edamontology.org/topic_1312"},{"id":"T27","span":{"begin":1032,"end":1040},"obj":"http://edamontology.org/topic_0111"},{"id":"T28","span":{"begin":1032,"end":1040},"obj":"http://edamontology.org/topic_0749"},{"id":"T29","span":{"begin":1054,"end":1061},"obj":"http://edamontology.org/topic_0622"},{"id":"T30","span":{"begin":1093,"end":1102},"obj":"http://edamontology.org/topic_0080"},{"id":"T31","span":{"begin":1093,"end":1102},"obj":"http://edamontology.org/topic_3168"},{"id":"T32","span":{"begin":1135,"end":1143},"obj":"http://edamontology.org/topic_3168"},{"id":"T33","span":{"begin":1135,"end":1143},"obj":"http://edamontology.org/topic_0080"},{"id":"T34","span":{"begin":1173,"end":1179},"obj":"http://edamontology.org/topic_0158"},{"id":"T35","span":{"begin":1189,"end":1197},"obj":"http://edamontology.org/topic_3168"},{"id":"T36","span":{"begin":1189,"end":1197},"obj":"http://edamontology.org/topic_0080"},{"id":"T37","span":{"begin":1189,"end":1204},"obj":"http://edamontology.org/topic_0160"},{"id":"T38","span":{"begin":1269,"end":1275},"obj":"http://edamontology.org/topic_0158"},{"id":"T39","span":{"begin":1290,"end":1295},"obj":"http://edamontology.org/topic_0158"},{"id":"T40","span":{"begin":1314,"end":1329},"obj":"http://edamontology.org/topic_0203"},{"id":"T41","span":{"begin":1314,"end":1329},"obj":"http://edamontology.org/topic_3308"},{"id":"T42","span":{"begin":1314,"end":1329},"obj":"http://edamontology.org/topic_3512"},{"id":"T43","span":{"begin":1314,"end":1329},"obj":"http://edamontology.org/topic_0110"},{"id":"T44","span":{"begin":1355,"end":1363},"obj":"http://edamontology.org/topic_0749"},{"id":"T45","span":{"begin":1486,"end":1494},"obj":"http://edamontology.org/topic_0080"},{"id":"T46","span":{"begin":1486,"end":1494},"obj":"http://edamontology.org/topic_3168"},{"id":"T47","span":{"begin":1527,"end":1542},"obj":"http://edamontology.org/topic_3512"},{"id":"T48","span":{"begin":1527,"end":1542},"obj":"http://edamontology.org/topic_0203"},{"id":"T49","span":{"begin":1527,"end":1542},"obj":"http://edamontology.org/topic_0110"},{"id":"T50","span":{"begin":1527,"end":1542},"obj":"http://edamontology.org/topic_3308"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    EDAM-DFO

    {"project":"EDAM-DFO","denotations":[{"id":"T1","span":{"begin":306,"end":314},"obj":"http://edamontology.org/operation_3642"},{"id":"T2","span":{"begin":593,"end":599},"obj":"http://edamontology.org/data_2048"},{"id":"T3","span":{"begin":852,"end":864},"obj":"http://edamontology.org/operation_0004"},{"id":"T4","span":{"begin":909,"end":919},"obj":"http://edamontology.org/data_0842"},{"id":"T5","span":{"begin":909,"end":919},"obj":"http://edamontology.org/data_2611"},{"id":"T6","span":{"begin":982,"end":992},"obj":"http://edamontology.org/format_1207"},{"id":"T7","span":{"begin":1093,"end":1102},"obj":"http://edamontology.org/operation_3218"},{"id":"T8","span":{"begin":1093,"end":1102},"obj":"http://edamontology.org/data_2044"},{"id":"T9","span":{"begin":1093,"end":1110},"obj":"http://edamontology.org/data_0865"},{"id":"T10","span":{"begin":1093,"end":1110},"obj":"http://edamontology.org/data_1413"},{"id":"T11","span":{"begin":1093,"end":1110},"obj":"http://edamontology.org/data_2161"},{"id":"T12","span":{"begin":1135,"end":1143},"obj":"http://edamontology.org/data_2044"},{"id":"T13","span":{"begin":1135,"end":1143},"obj":"http://edamontology.org/operation_3218"},{"id":"T14","span":{"begin":1135,"end":1151},"obj":"http://edamontology.org/data_1413"},{"id":"T15","span":{"begin":1135,"end":1151},"obj":"http://edamontology.org/data_2161"},{"id":"T16","span":{"begin":1135,"end":1151},"obj":"http://edamontology.org/data_0865"},{"id":"T17","span":{"begin":1161,"end":1172},"obj":"http://edamontology.org/operation_2423"},{"id":"T18","span":{"begin":1189,"end":1197},"obj":"http://edamontology.org/operation_3218"},{"id":"T19","span":{"begin":1189,"end":1197},"obj":"http://edamontology.org/data_2044"},{"id":"T20","span":{"begin":1486,"end":1494},"obj":"http://edamontology.org/operation_3218"},{"id":"T21","span":{"begin":1486,"end":1494},"obj":"http://edamontology.org/data_2044"},{"id":"T22","span":{"begin":1486,"end":1498},"obj":"http://edamontology.org/data_1279"},{"id":"T23","span":{"begin":1486,"end":1498},"obj":"http://edamontology.org/operation_2871"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    GlyCosmos600-FMA

    {"project":"GlyCosmos600-FMA","denotations":[{"id":"PD-FMA-PAE-B_T1","span":{"begin":93,"end":97},"obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"PD-FMA-PAE-B_T2","span":{"begin":134,"end":138},"obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"PD-FMA-PAE-B_T3","span":{"begin":249,"end":253},"obj":"http://purl.org/sig/ont/fma/fma67122"},{"id":"PD-FMA-PAE-B_T4","span":{"begin":422,"end":426},"obj":"http://purl.org/sig/ont/fma/fma84120"},{"id":"PD-FMA-PAE-B_T5","span":{"begin":571,"end":576},"obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"PD-FMA-PAE-B_T6","span":{"begin":656,"end":660},"obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"PD-FMA-PAE-B_T7","span":{"begin":706,"end":711},"obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"PD-FMA-PAE-B_T8","span":{"begin":759,"end":763},"obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"PD-FMA-PAE-B_T9","span":{"begin":780,"end":787},"obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"PD-FMA-PAE-B_T10","span":{"begin":933,"end":936},"obj":"http://purl.org/sig/ont/fma/fma74412"},{"id":"PD-FMA-PAE-B_T11","span":{"begin":982,"end":992},"obj":"http://purl.org/sig/ont/fma/fma82740"},{"id":"PD-FMA-PAE-B_T12","span":{"begin":1054,"end":1061},"obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"PD-FMA-PAE-B_T13","span":{"begin":1062,"end":1065},"obj":"http://purl.org/sig/ont/fma/fma74412"},{"id":"PD-FMA-PAE-B_T14","span":{"begin":1348,"end":1353},"obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"PD-FMA-PAE-B_T15","span":{"begin":1400,"end":1404},"obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"PD-FMA-PAE-B_T16","span":{"begin":1571,"end":1575},"obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"PD-FMA-PAE-B_T17","span":{"begin":1589,"end":1593},"obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    pubmed-enju-pas

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"EnjuParser_T251"},{"id":"EnjuParser_R252","pred":"arg2Of","subj":"EnjuParser_T255","obj":"EnjuParser_T251"},{"id":"EnjuParser_R253","pred":"arg1Of","subj":"EnjuParser_T255","obj":"EnjuParser_T252"},{"id":"EnjuParser_R254","pred":"arg1Of","subj":"EnjuParser_T255","obj":"EnjuParser_T253"},{"id":"EnjuParser_R255","pred":"arg1Of","subj":"EnjuParser_T255","obj":"EnjuParser_T254"},{"id":"EnjuParser_R256","pred":"arg1Of","subj":"EnjuParser_T250","obj":"EnjuParser_T256"},{"id":"EnjuParser_R257","pred":"arg2Of","subj":"EnjuParser_T259","obj":"EnjuParser_T256"},{"id":"EnjuParser_R258","pred":"arg1Of","subj":"EnjuParser_T259","obj":"EnjuParser_T257"},{"id":"EnjuParser_R259","pred":"arg1Of","subj":"EnjuParser_T259","obj":"EnjuParser_T258"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    GlyCosmos600-GlycoProteins

    {"project":"GlyCosmos600-GlycoProteins","denotations":[{"id":"PD-GlycoProteins-B_T1","span":{"begin":128,"end":130},"obj":"http://purl.uniprot.org/uniprot/P35914"},{"id":"PD-GlycoProteins-B_T2","span":{"begin":271,"end":273},"obj":"http://purl.uniprot.org/uniprot/P35914"},{"id":"PD-GlycoProteins-B_T3","span":{"begin":565,"end":567},"obj":"http://purl.uniprot.org/uniprot/P35914"},{"id":"PD-GlycoProteins-B_T4","span":{"begin":700,"end":702},"obj":"http://purl.uniprot.org/uniprot/P35914"},{"id":"PD-GlycoProteins-B_T5","span":{"begin":1342,"end":1344},"obj":"http://purl.uniprot.org/uniprot/P35914"},{"id":"PD-GlycoProteins-B_T6","span":{"begin":1394,"end":1396},"obj":"http://purl.uniprot.org/uniprot/P35914"},{"id":"PD-GlycoProteins-B_T7","span":{"begin":1583,"end":1585},"obj":"http://purl.uniprot.org/uniprot/P35914"},{"id":"PD-GlycoProteins-B_T8","span":{"begin":128,"end":130},"obj":"http://purl.uniprot.org/uniprot/O81027"},{"id":"PD-GlycoProteins-B_T9","span":{"begin":271,"end":273},"obj":"http://purl.uniprot.org/uniprot/O81027"},{"id":"PD-GlycoProteins-B_T10","span":{"begin":565,"end":567},"obj":"http://purl.uniprot.org/uniprot/O81027"},{"id":"PD-GlycoProteins-B_T11","span":{"begin":700,"end":702},"obj":"http://purl.uniprot.org/uniprot/O81027"},{"id":"PD-GlycoProteins-B_T12","span":{"begin":1342,"end":1344},"obj":"http://purl.uniprot.org/uniprot/O81027"},{"id":"PD-GlycoProteins-B_T13","span":{"begin":1394,"end":1396},"obj":"http://purl.uniprot.org/uniprot/O81027"},{"id":"PD-GlycoProteins-B_T14","span":{"begin":1583,"end":1585},"obj":"http://purl.uniprot.org/uniprot/O81027"},{"id":"PD-GlycoProteins-B_T15","span":{"begin":249,"end":253},"obj":"https://acgg.asia/db/gpdb/id/GPDB0005542"},{"id":"PD-GlycoProteins-B_T16","span":{"begin":249,"end":253},"obj":"https://acgg.asia/db/gpdb/id/GPDB0005543"},{"id":"PD-GlycoProteins-B_T17","span":{"begin":249,"end":253},"obj":"https://acgg.asia/db/gpdb/id/GPDB0005544"},{"id":"PD-GlycoProteins-B_T18","span":{"begin":249,"end":253},"obj":"https://acgg.asia/db/gpdb/id/GPDB0005545"},{"id":"PD-GlycoProteins-B_T19","span":{"begin":193,"end":236},"obj":"http://purl.uniprot.org/uniprot/P13721"},{"id":"PD-GlycoProteins-B_T20","span":{"begin":193,"end":236},"obj":"http://purl.uniprot.org/uniprot/P15907"},{"id":"PD-GlycoProteins-B_T21","span":{"begin":193,"end":236},"obj":"http://purl.uniprot.org/uniprot/Q76K27"},{"id":"PD-GlycoProteins-B_T22","span":{"begin":193,"end":236},"obj":"http://purl.uniprot.org/uniprot/Q96JF0"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    GlyCosmos600-GlycoEpitope

    {"project":"GlyCosmos600-GlycoEpitope","denotations":[{"id":"PD-GlycoEpitope-B_T1","span":{"begin":383,"end":385},"obj":"http://www.glycoepitope.jp/epitopes/AN0281"},{"id":"PD-GlycoEpitope-B_T2","span":{"begin":810,"end":812},"obj":"http://www.glycoepitope.jp/epitopes/AN0281"},{"id":"PD-GlycoEpitope-B_T3","span":{"begin":1029,"end":1031},"obj":"http://www.glycoepitope.jp/epitopes/AN0281"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    Lectin

    {"project":"Lectin","denotations":[{"id":"Lectin_T1","span":{"begin":446,"end":448},"obj":"https://acgg.asia/db/lfdb/LfDB0344"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    GlycoBiology-Epitope

    {"project":"GlycoBiology-Epitope","denotations":[{"id":"PD-GlycoEpitope-B_T1","span":{"begin":383,"end":385},"obj":"http://www.glycoepitope.jp/epitopes/AN0281"},{"id":"PD-GlycoEpitope-B_T2","span":{"begin":810,"end":812},"obj":"http://www.glycoepitope.jp/epitopes/AN0281"},{"id":"PD-GlycoEpitope-B_T3","span":{"begin":1029,"end":1031},"obj":"http://www.glycoepitope.jp/epitopes/AN0281"}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}

    GlyTouCan-IUPAC

    {"project":"GlyTouCan-IUPAC","denotations":[{"id":"GlycanIUPAC_T1","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G52626JU\""},{"id":"GlycanIUPAC_T2","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G52626JU\""},{"id":"GlycanIUPAC_T3","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G52626JU\""},{"id":"GlycanIUPAC_T4","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G44803MF\""},{"id":"GlycanIUPAC_T5","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G44803MF\""},{"id":"GlycanIUPAC_T6","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G44803MF\""},{"id":"GlycanIUPAC_T7","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G75769XJ\""},{"id":"GlycanIUPAC_T8","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G75769XJ\""},{"id":"GlycanIUPAC_T9","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G75769XJ\""},{"id":"GlycanIUPAC_T10","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G32075UV\""},{"id":"GlycanIUPAC_T11","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G32075UV\""},{"id":"GlycanIUPAC_T12","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G32075UV\""},{"id":"GlycanIUPAC_T13","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G19871KB\""},{"id":"GlycanIUPAC_T14","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G19871KB\""},{"id":"GlycanIUPAC_T15","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G19871KB\""},{"id":"GlycanIUPAC_T16","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G02297CB\""},{"id":"GlycanIUPAC_T17","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G02297CB\""},{"id":"GlycanIUPAC_T18","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G02297CB\""},{"id":"GlycanIUPAC_T19","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G86711IL\""},{"id":"GlycanIUPAC_T20","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G86711IL\""},{"id":"GlycanIUPAC_T21","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G86711IL\""},{"id":"GlycanIUPAC_T22","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G29641QF\""},{"id":"GlycanIUPAC_T23","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G29641QF\""},{"id":"GlycanIUPAC_T24","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G29641QF\""},{"id":"GlycanIUPAC_T25","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G81991PU\""},{"id":"GlycanIUPAC_T26","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G81991PU\""},{"id":"GlycanIUPAC_T27","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G81991PU\""},{"id":"GlycanIUPAC_T28","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G50843NR\""},{"id":"GlycanIUPAC_T29","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G50843NR\""},{"id":"GlycanIUPAC_T30","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G50843NR\""},{"id":"GlycanIUPAC_T31","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G72982UM\""},{"id":"GlycanIUPAC_T32","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G72982UM\""},{"id":"GlycanIUPAC_T33","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G72982UM\""},{"id":"GlycanIUPAC_T34","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G99079GA\""},{"id":"GlycanIUPAC_T35","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G99079GA\""},{"id":"GlycanIUPAC_T36","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G99079GA\""},{"id":"GlycanIUPAC_T37","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G45378TF\""},{"id":"GlycanIUPAC_T38","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G45378TF\""},{"id":"GlycanIUPAC_T39","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G45378TF\""},{"id":"GlycanIUPAC_T40","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G57506TF\""},{"id":"GlycanIUPAC_T41","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G57506TF\""},{"id":"GlycanIUPAC_T42","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G57506TF\""},{"id":"GlycanIUPAC_T43","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G07340KF\""},{"id":"GlycanIUPAC_T44","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G07340KF\""},{"id":"GlycanIUPAC_T45","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G07340KF\""},{"id":"GlycanIUPAC_T46","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G64568HT\""},{"id":"GlycanIUPAC_T47","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G64568HT\""},{"id":"GlycanIUPAC_T48","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G64568HT\""},{"id":"GlycanIUPAC_T49","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G46846LC\""},{"id":"GlycanIUPAC_T50","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G46846LC\""},{"id":"GlycanIUPAC_T51","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G46846LC\""},{"id":"GlycanIUPAC_T52","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G77011RU\""},{"id":"GlycanIUPAC_T53","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G77011RU\""},{"id":"GlycanIUPAC_T54","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G77011RU\""},{"id":"GlycanIUPAC_T55","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G31033PX\""},{"id":"GlycanIUPAC_T56","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G31033PX\""},{"id":"GlycanIUPAC_T57","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G31033PX\""},{"id":"GlycanIUPAC_T58","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G16221YF\""},{"id":"GlycanIUPAC_T59","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G16221YF\""},{"id":"GlycanIUPAC_T60","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G16221YF\""},{"id":"GlycanIUPAC_T61","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G61143JT\""},{"id":"GlycanIUPAC_T62","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G61143JT\""},{"id":"GlycanIUPAC_T63","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G61143JT\""},{"id":"GlycanIUPAC_T64","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G51234LG\""},{"id":"GlycanIUPAC_T65","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G51234LG\""},{"id":"GlycanIUPAC_T66","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G51234LG\""},{"id":"GlycanIUPAC_T67","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G61307AH\""},{"id":"GlycanIUPAC_T68","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G61307AH\""},{"id":"GlycanIUPAC_T69","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G61307AH\""},{"id":"GlycanIUPAC_T70","span":{"begin":1155,"end":1158},"obj":"\"http://rdf.glycoinfo.org/glycan/G57624ZE\""},{"id":"GlycanIUPAC_T71","span":{"begin":1237,"end":1240},"obj":"\"http://rdf.glycoinfo.org/glycan/G57624ZE\""},{"id":"GlycanIUPAC_T72","span":{"begin":1284,"end":1287},"obj":"\"http://rdf.glycoinfo.org/glycan/G57624ZE\""}],"text":"Transcriptional regulation of human beta-galactoside alpha2, 6-sialyltransferase (hST6Gal I) gene during differentiation of the HL-60 cell line.\nWe have previously shown that the expression of beta-galactoside alpha2,6-sialyltransferase (hST6Gal I) mRNA decreases during HL-60 differentiation induced with dimethyl sulfoxide (DMSO) and that transcriptional regulation depends on the P3 promoter that exists 5'-upstream of exon Y (A. Taniguchi et al., FEBS Lett.,441, 191-194, 1998). The regulation of hST6Gal I may be important for the expression of sialyl-Le(x)in HL-60 cells. In the present report, we studied the transcriptional regulation of hST6Gal I gene during DMSO-induced differentiation of HL-60 cells. To elucidate the molecular basis of hST6Gal I gene expression, the genomic region containing the P3 promoter of hST6Gal I was isolated and functionally characterized. Using a luciferase assay, we identified a functional DNA portion that confers an enhancer, located at nucleotide number (nt) -317 to -174 within the P3 promoter of hST6Gal I genomic DNA. This element contains two sequences similar to Sp1 (GC-box) and one sequence similar to Oct-1 recognition motifs (octamer sequence). Site-directed mutagenesis of Sp1 and Oct-1 sites showed that two Sp1 motifs and one Oct-1 motif are essential for transcriptional activity in HL-60 cells. Enhancer activity is suppressed during HL-60 cell differentiation induced with DMSO. These results suggest that GC-box and octamer sequence may play a critical role in the transcriptional regulation of the hST6Gal I gene during HL-60 cell differentiation."}