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PubMed:10814700 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 27-37 https://glytoucan.org/Structures/Glycans/G00017MO denotes hyaluronan
T2 110-120 https://glytoucan.org/Structures/Glycans/G00017MO denotes Hyaluronan
T3 122-124 https://glytoucan.org/Structures/Glycans/G00017MO denotes HA
T4 317-319 https://glytoucan.org/Structures/Glycans/G00017MO denotes HA
T5 716-718 https://glytoucan.org/Structures/Glycans/G00017MO denotes HA
T6 1046-1048 https://glytoucan.org/Structures/Glycans/G00017MO denotes HA

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 27-37 Glycan_Motif denotes hyaluronan https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00017MO
T2 110-120 Glycan_Motif denotes Hyaluronan https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00017MO
T3 122-124 Glycan_Motif denotes HA https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00017MO
T4 317-319 Glycan_Motif denotes HA https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00017MO
T5 716-718 Glycan_Motif denotes HA https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00017MO
T6 1046-1048 Glycan_Motif denotes HA https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00017MO

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 1109-1115 http://purl.obolibrary.org/obo/MAT_0000091 denotes handed

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-109 Sentence denotes Conformational behavior of hyaluronan in relation to its physical properties as probed by molecular modeling.
TextSentencer_T2 110-220 Sentence denotes Hyaluronan (HA) is a linear charged polysaccharide whose structure is made up of repeating disaccharide units.
TextSentencer_T3 221-339 Sentence denotes Apparently conflicting reports have been published about the nature of the helical structure of HA in the solid state.
TextSentencer_T4 340-577 Sentence denotes Recent developments in the field of molecular modeling of polysaccharides offer new opportunities to reexamine the structural basis underlying the formation and stabilization of ordered structures and their interactions with counterions.
TextSentencer_T5 578-800 Sentence denotes The conformational spaces available and the low energy conformations for the disaccharide, trisaccharide, and tetrasaccharide segments of HA were investigated via molecular mechanics calculations using the MM3 force field.
TextSentencer_T6 801-907 Sentence denotes First, the results were used to access the configurational statistics of the corresponding polysaccharide.
TextSentencer_T7 908-992 Sentence denotes A disordered chain having a persistence length of 75 A at 25 degrees C is predicted.
TextSentencer_T8 993-1144 Sentence denotes Then, the exploration of the stable ordered forms of HA led to numerous helical conformations, both left- and right-handed, having comparable energies.
TextSentencer_T9 1145-1276 Sentence denotes Several of these conformations correspond to the experimentally observed ones and illustrate the versatility of the polysaccharide.
TextSentencer_T10 1277-1412 Sentence denotes The double stranded helical forms have also been explored and theoretical structures have been compared to experimentally derived ones.
T1 0-109 Sentence denotes Conformational behavior of hyaluronan in relation to its physical properties as probed by molecular modeling.
T2 110-220 Sentence denotes Hyaluronan (HA) is a linear charged polysaccharide whose structure is made up of repeating disaccharide units.
T3 221-339 Sentence denotes Apparently conflicting reports have been published about the nature of the helical structure of HA in the solid state.
T4 340-577 Sentence denotes Recent developments in the field of molecular modeling of polysaccharides offer new opportunities to reexamine the structural basis underlying the formation and stabilization of ordered structures and their interactions with counterions.
T5 578-800 Sentence denotes The conformational spaces available and the low energy conformations for the disaccharide, trisaccharide, and tetrasaccharide segments of HA were investigated via molecular mechanics calculations using the MM3 force field.
T6 801-907 Sentence denotes First, the results were used to access the configurational statistics of the corresponding polysaccharide.
T7 908-992 Sentence denotes A disordered chain having a persistence length of 75 A at 25 degrees C is predicted.
T8 993-1144 Sentence denotes Then, the exploration of the stable ordered forms of HA led to numerous helical conformations, both left- and right-handed, having comparable energies.
T9 1145-1276 Sentence denotes Several of these conformations correspond to the experimentally observed ones and illustrate the versatility of the polysaccharide.
T10 1277-1412 Sentence denotes The double stranded helical forms have also been explored and theoretical structures have been compared to experimentally derived ones.
T1 0-109 Sentence denotes Conformational behavior of hyaluronan in relation to its physical properties as probed by molecular modeling.
T2 110-220 Sentence denotes Hyaluronan (HA) is a linear charged polysaccharide whose structure is made up of repeating disaccharide units.
T3 221-339 Sentence denotes Apparently conflicting reports have been published about the nature of the helical structure of HA in the solid state.
T4 340-577 Sentence denotes Recent developments in the field of molecular modeling of polysaccharides offer new opportunities to reexamine the structural basis underlying the formation and stabilization of ordered structures and their interactions with counterions.
T5 578-800 Sentence denotes The conformational spaces available and the low energy conformations for the disaccharide, trisaccharide, and tetrasaccharide segments of HA were investigated via molecular mechanics calculations using the MM3 force field.
T6 801-907 Sentence denotes First, the results were used to access the configurational statistics of the corresponding polysaccharide.
T7 908-992 Sentence denotes A disordered chain having a persistence length of 75 A at 25 degrees C is predicted.
T8 993-1144 Sentence denotes Then, the exploration of the stable ordered forms of HA led to numerous helical conformations, both left- and right-handed, having comparable energies.
T9 1145-1276 Sentence denotes Several of these conformations correspond to the experimentally observed ones and illustrate the versatility of the polysaccharide.
T10 1277-1412 Sentence denotes The double stranded helical forms have also been explored and theoretical structures have been compared to experimentally derived ones.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 27-37 https://glytoucan.org/Structures/Glycans/G00017MO denotes hyaluronan
T2 110-120 https://glytoucan.org/Structures/Glycans/G00017MO denotes Hyaluronan

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 27-37 FMAID:167396 denotes hyaluronan
_T2 27-37 FMAID:63014 denotes hyaluronan
_T3 110-120 FMAID:63014 denotes Hyaluronan
_T4 110-120 FMAID:167396 denotes Hyaluronan
_T5 146-160 FMAID:82746 denotes polysaccharide
_T6 146-160 FMAID:196779 denotes polysaccharide
_T7 146-160 FMAID:196735 denotes polysaccharide
_T8 146-160 FMAID:82785 denotes polysaccharide
_T9 201-213 FMAID:196733 denotes disaccharide
_T10 201-213 FMAID:82744 denotes disaccharide
_T11 327-332 FMAID:85813 denotes solid
_T12 398-413 FMAID:196735 denotes polysaccharides
_T13 398-413 FMAID:82785 denotes polysaccharides
_T14 398-413 FMAID:196779 denotes polysaccharides
_T15 398-413 FMAID:82746 denotes polysaccharides
_T16 655-667 FMAID:82744 denotes disaccharide
_T17 655-667 FMAID:196733 denotes disaccharide
_T18 704-712 FMAID:256626 denotes segments
_T19 704-712 FMAID:256627 denotes segments
_T20 704-712 FMAID:99729 denotes segments
_T21 704-712 FMAID:11367 denotes segments
_T22 704-712 FMAID:256625 denotes segments
_T23 704-712 FMAID:256624 denotes segments
_T24 704-712 FMAID:256628 denotes segments
_T25 704-712 FMAID:256630 denotes segments
_T26 704-712 FMAID:256629 denotes segments
_T27 704-712 FMAID:256631 denotes segments
_T28 704-712 FMAID:256632 denotes segments
_T29 704-712 FMAID:256633 denotes segments
_T30 704-718 FMAID:258779 denotes segments of HA
_T31 704-718 FMAID:24945 denotes segments of HA
_T32 892-906 FMAID:82746 denotes polysaccharide
_T33 892-906 FMAID:196779 denotes polysaccharide
_T34 892-906 FMAID:82785 denotes polysaccharide
_T35 892-906 FMAID:196735 denotes polysaccharide
_T36 1093-1097 FMAID:171164 denotes left
_T37 1093-1097 FMAID:30334 denotes left
_T38 1103-1108 FMAID:30333 denotes right
_T39 1103-1108 FMAID:171315 denotes right
_T40 1103-1115 FMAID:97629 denotes right-handed
_T41 1103-1115 FMAID:9713 denotes right-handed
_T42 1109-1115 FMAID:97627 denotes handed
_T43 1109-1115 FMAID:9712 denotes handed
_T44 1261-1275 FMAID:82785 denotes polysaccharide
_T45 1261-1275 FMAID:196779 denotes polysaccharide
_T46 1261-1275 FMAID:196735 denotes polysaccharide
_T47 1261-1275 FMAID:82746 denotes polysaccharide

uniprot-human

Id Subject Object Predicate Lexical cue
T1 122-124 http://www.uniprot.org/uniprot/P69208 denotes HA
T2 317-319 http://www.uniprot.org/uniprot/P69208 denotes HA
T3 716-718 http://www.uniprot.org/uniprot/P69208 denotes HA
T4 1046-1048 http://www.uniprot.org/uniprot/P69208 denotes HA

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 15-23 http://purl.bioontology.org/ontology/STY/T053 denotes behavior
T2 41-49 http://purl.bioontology.org/ontology/NCBITAXON/353209 denotes relation
T3 296-303 http://purl.bioontology.org/ontology/NCBITAXON/53324 denotes helical
T4 751-760 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanics
T5 1065-1072 http://purl.bioontology.org/ontology/NCBITAXON/53324 denotes helical
T6 1297-1304 http://purl.bioontology.org/ontology/NCBITAXON/53324 denotes helical

GO-BP

Id Subject Object Predicate Lexical cue
T1 15-23 http://purl.obolibrary.org/obo/GO_0007610 denotes behavior
T2 347-359 http://purl.obolibrary.org/obo/GO_0032502 denotes developments
T3 487-496 http://purl.obolibrary.org/obo/GO_0009058 denotes formation
T4 704-712 http://purl.obolibrary.org/obo/GO_0035282 denotes segments

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 57-65 http://edamontology.org/topic_3318 denotes physical
T2 80-86 http://edamontology.org/topic_0632 denotes probed
T3 90-108 http://edamontology.org/topic_2275 denotes molecular modeling
T4 376-394 http://edamontology.org/topic_2275 denotes molecular modeling
T5 547-559 http://edamontology.org/topic_0602 denotes interactions
T6 860-870 http://edamontology.org/topic_2269 denotes statistics
T7 1384-1406 http://edamontology.org/topic_3678 denotes experimentally derived

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 57-76 http://edamontology.org/data_2087 denotes physical properties
T2 90-108 http://edamontology.org/operation_0322 denotes molecular modeling
T3 167-176 http://edamontology.org/data_0883 denotes structure
T4 167-179 http://edamontology.org/data_1070 denotes structure is
T5 244-251 http://edamontology.org/data_2048 denotes reports
T6 304-313 http://edamontology.org/data_0883 denotes structure
T7 376-394 http://edamontology.org/operation_0322 denotes molecular modeling
T8 455-465 http://edamontology.org/data_0883 denotes structural
T9 487-496 http://edamontology.org/format_1915 denotes formation
T10 487-496 http://edamontology.org/operation_0335 denotes formation
T11 526-536 http://edamontology.org/data_0883 denotes structures
T12 761-773 http://edamontology.org/operation_3438 denotes calculations
T13 860-870 http://edamontology.org/operation_2238 denotes statistics
T14 982-991 http://edamontology.org/operation_2423 denotes predicted
T15 1288-1296 http://edamontology.org/data_0853 denotes stranded
T16 1351-1361 http://edamontology.org/data_0883 denotes structures

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 1109-1115 http://purl.obolibrary.org/obo/MAT_0000091 denotes handed

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 1109-1115 Body_part denotes handed http://purl.obolibrary.org/obo/MAT_0000091

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 597-603 Body_part denotes spaces http://purl.obolibrary.org/obo/UBERON_0000464
T2 704-712 Body_part denotes segments http://purl.obolibrary.org/obo/UBERON_0000914