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PubMed:10779519 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
T1 0-149 Sentence denotes Bicarbonate binding activity of the CmpA protein of the cyanobacterium Synechococcus sp. strain PCC 7942 involved in active transport of bicarbonate.
T2 150-298 Sentence denotes The cmpABCD operon of the cyanobacterium Synechococcus sp. strain PCC 7942 encodes an ATP-binding cassette transporter involved in HCO(3)(-) uptake.
T3 299-562 Sentence denotes The three genes, cmpBCD, encode membrane components of an ATP-binding cassette transporter, whereas cmpA encodes a 42-kDa cytoplasmic membrane protein, which is 46.5% identical to the membrane-anchored substrate-binding protein of the nitrate/nitrite transporter.
T4 563-821 Sentence denotes Equilibrium dialysis analysis using H(14)CO(3)(-) showed that a truncated CmpA protein lacking the N-terminal 31 amino acids, expressed in Escherichia coli cells as a histidine-tagged soluble protein, specifically binds inorganic carbon (CO(2) or HCO(3)(-)).
T5 822-995 Sentence denotes The addition of the recombinant CmpA protein to a buffer caused a decrease in the concentration of dissolved CO(2) because of the binding of inorganic carbon to the protein.
T6 996-1150 Sentence denotes The decrease in CO(2) concentration was accelerated by the addition of carbonic anhydrase, indicating that HCO(3)(-), but not CO(2), binds to the protein.
T7 1151-1369 Sentence denotes Mass spectrometric measurements of the amounts of unbound and bound HCO(3)(-) in CmpA solutions containing low concentrations of inorganic carbon revealed that CmpA binds HCO(3)(-) with high affinity (K(d) = 5 microm).
T8 1370-1596 Sentence denotes A similar dissociation constant was obtained by analysis of the competitive inhibition of the CmpA protein on the carboxylation of phosphoenolpyruvate by phosphoenolpyruvate carboxylase at limiting concentrations of HCO(3)(-).
T9 1597-1705 Sentence denotes These findings showed that the cmpA gene encodes the substrate-binding protein of the HCO(3)(-) transporter.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 56-70 http://purl.obolibrary.org/obo/MAT_0000192 denotes cyanobacterium
T2 176-190 http://purl.obolibrary.org/obo/MAT_0000192 denotes cyanobacterium

CyanoBase

Id Subject Object Predicate Lexical cue
T1 36-40 protein denotes CmpA
T2 399-403 protein denotes cmpA
T3 637-641 protein denotes CmpA
T4 854-858 protein denotes CmpA
T5 1232-1236 protein denotes CmpA
T6 1311-1315 protein denotes CmpA
T7 1464-1468 protein denotes CmpA
T8 1628-1632 protein denotes cmpA

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 96-99 Disease denotes PCC http://purl.obolibrary.org/obo/MONDO_0004974|http://purl.obolibrary.org/obo/MONDO_0022673
T3 216-219 Disease denotes PCC http://purl.obolibrary.org/obo/MONDO_0004974|http://purl.obolibrary.org/obo/MONDO_0022673

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 56-70 Body_part denotes cyanobacterium http://purl.obolibrary.org/obo/MAT_0000192
T2 176-190 Body_part denotes cyanobacterium http://purl.obolibrary.org/obo/MAT_0000192

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 56-70 OrganismTaxon denotes cyanobacterium 102234
T2 71-84 OrganismTaxon denotes Synechococcus 1129
T3 176-190 OrganismTaxon denotes cyanobacterium 102234
T4 191-204 OrganismTaxon denotes Synechococcus 1129
T5 575-583 OrganismTaxon denotes dialysis 124307
T6 702-718 OrganismTaxon denotes Escherichia coli 562

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 331-339 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T4 421-441 Body_part denotes cytoplasmic membrane http://purl.obolibrary.org/obo/GO_0005886
T5 483-491 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158