PubMed:10779519
Annnotations
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-149 | Sentence | denotes | Bicarbonate binding activity of the CmpA protein of the cyanobacterium Synechococcus sp. strain PCC 7942 involved in active transport of bicarbonate. |
T2 | 150-298 | Sentence | denotes | The cmpABCD operon of the cyanobacterium Synechococcus sp. strain PCC 7942 encodes an ATP-binding cassette transporter involved in HCO(3)(-) uptake. |
T3 | 299-562 | Sentence | denotes | The three genes, cmpBCD, encode membrane components of an ATP-binding cassette transporter, whereas cmpA encodes a 42-kDa cytoplasmic membrane protein, which is 46.5% identical to the membrane-anchored substrate-binding protein of the nitrate/nitrite transporter. |
T4 | 563-821 | Sentence | denotes | Equilibrium dialysis analysis using H(14)CO(3)(-) showed that a truncated CmpA protein lacking the N-terminal 31 amino acids, expressed in Escherichia coli cells as a histidine-tagged soluble protein, specifically binds inorganic carbon (CO(2) or HCO(3)(-)). |
T5 | 822-995 | Sentence | denotes | The addition of the recombinant CmpA protein to a buffer caused a decrease in the concentration of dissolved CO(2) because of the binding of inorganic carbon to the protein. |
T6 | 996-1150 | Sentence | denotes | The decrease in CO(2) concentration was accelerated by the addition of carbonic anhydrase, indicating that HCO(3)(-), but not CO(2), binds to the protein. |
T7 | 1151-1369 | Sentence | denotes | Mass spectrometric measurements of the amounts of unbound and bound HCO(3)(-) in CmpA solutions containing low concentrations of inorganic carbon revealed that CmpA binds HCO(3)(-) with high affinity (K(d) = 5 microm). |
T8 | 1370-1596 | Sentence | denotes | A similar dissociation constant was obtained by analysis of the competitive inhibition of the CmpA protein on the carboxylation of phosphoenolpyruvate by phosphoenolpyruvate carboxylase at limiting concentrations of HCO(3)(-). |
T9 | 1597-1705 | Sentence | denotes | These findings showed that the cmpA gene encodes the substrate-binding protein of the HCO(3)(-) transporter. |
Glycosmos6-MAT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 56-70 | http://purl.obolibrary.org/obo/MAT_0000192 | denotes | cyanobacterium |
T2 | 176-190 | http://purl.obolibrary.org/obo/MAT_0000192 | denotes | cyanobacterium |
CyanoBase
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 36-40 | protein | denotes | CmpA |
T2 | 399-403 | protein | denotes | cmpA |
T3 | 637-641 | protein | denotes | CmpA |
T4 | 854-858 | protein | denotes | CmpA |
T5 | 1232-1236 | protein | denotes | CmpA |
T6 | 1311-1315 | protein | denotes | CmpA |
T7 | 1464-1468 | protein | denotes | CmpA |
T8 | 1628-1632 | protein | denotes | cmpA |
mondo_disease
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 96-99 | Disease | denotes | PCC | http://purl.obolibrary.org/obo/MONDO_0004974|http://purl.obolibrary.org/obo/MONDO_0022673 |
T3 | 216-219 | Disease | denotes | PCC | http://purl.obolibrary.org/obo/MONDO_0004974|http://purl.obolibrary.org/obo/MONDO_0022673 |
Anatomy-MAT
Id | Subject | Object | Predicate | Lexical cue | mat_id |
---|---|---|---|---|---|
T1 | 56-70 | Body_part | denotes | cyanobacterium | http://purl.obolibrary.org/obo/MAT_0000192 |
T2 | 176-190 | Body_part | denotes | cyanobacterium | http://purl.obolibrary.org/obo/MAT_0000192 |
NCBITAXON
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
T1 | 56-70 | OrganismTaxon | denotes | cyanobacterium | 102234 |
T2 | 71-84 | OrganismTaxon | denotes | Synechococcus | 1129 |
T3 | 176-190 | OrganismTaxon | denotes | cyanobacterium | 102234 |
T4 | 191-204 | OrganismTaxon | denotes | Synechococcus | 1129 |
T5 | 575-583 | OrganismTaxon | denotes | dialysis | 124307 |
T6 | 702-718 | OrganismTaxon | denotes | Escherichia coli | 562 |
Anatomy-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 331-339 | Body_part | denotes | membrane | http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158 |
T4 | 421-441 | Body_part | denotes | cytoplasmic membrane | http://purl.obolibrary.org/obo/GO_0005886 |
T5 | 483-491 | Body_part | denotes | membrane | http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158 |