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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 1550-1557 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 1550-1557 Glycan_Motif denotes glucose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G15021LG

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-116 Sentence denotes Glycopeptide export from mammalian microsomes is independent of calcium and is distinct from oligosaccharide export.
TextSentencer_T2 117-284 Sentence denotes Glycopeptides are exported from the endoplasmic reticulum to the cytosol of eukaryotic membranes in an ATP- and cytosol-requiring process (Romisch and Ali, 1997, Proc.
TextSentencer_T3 285-290 Sentence denotes Natl.
TextSentencer_T4 291-296 Sentence denotes Acad.
TextSentencer_T5 297-301 Sentence denotes Sci.
TextSentencer_T6 302-321 Sentence denotes USA,94, 6730-6734).
TextSentencer_T7 322-474 Sentence denotes Oligosaccharides of the polymannose-type are also exported from the endoplasmic reticulum of mammalian cells to the cytosol in an ATP-dependent fashion.
TextSentencer_T8 475-697 Sentence denotes These findings raise the strong possibility that the two substrate classes are transported by the same mechanism but the precise identity of the trans-location machinery for each substrate class has not been fully defined.
TextSentencer_T9 698-869 Sentence denotes Here we have investigated the mechanism by which a glycopeptide is exported from rat liver microsomes, and compare this to the export of free polymannose oligosaccharides.
TextSentencer_T10 870-1106 Sentence denotes Using EGTA and the endoplasmic reticulum calcium mobilizing agents thapsigargicin and calcium ionophores A23187 and ionomycin, we show that glycopeptides, in contrast to oligosaccharides, are exported by a calcium-independent mechanism.
TextSentencer_T11 1107-1264 Sentence denotes On the other hand, Mg(2+)is required in the assay for the transport of glycopeptide from mammalian microsomes which is in common with oligosaccharide export.
TextSentencer_T12 1265-1650 Sentence denotes Deoxynojirimycin and castanospermine, inhibitors of ER glucosidases, when added to rat liver microsomes prior to loading with peptide that bears an N -glycosylation sequon, had no effect on the release of glucosylated glycopeptides from membranes, indicating that removal of the alpha-glucose units from the oligomannose glycan structure of the glycopeptide is not required for export.
TextSentencer_T13 1651-1804 Sentence denotes In contrast to oligosaccharides, where transport is efficiently inhibited, mannosides were without effect or only weak inhibitors of glycopeptide export.
TextSentencer_T14 1805-2118 Sentence denotes Taken together, these data suggest that glycopeptides are exported by a distinct mechanism from oligosaccharides of the polymannose-type and that the peptide moiety is an important structural determinant for glycopeptide export and capable of directing translocation of substrates to a specific transport pathway.
T1 0-116 Sentence denotes Glycopeptide export from mammalian microsomes is independent of calcium and is distinct from oligosaccharide export.
T2 117-321 Sentence denotes Glycopeptides are exported from the endoplasmic reticulum to the cytosol of eukaryotic membranes in an ATP- and cytosol-requiring process (Romisch and Ali, 1997, Proc. Natl. Acad. Sci. USA,94, 6730-6734).
T3 322-474 Sentence denotes Oligosaccharides of the polymannose-type are also exported from the endoplasmic reticulum of mammalian cells to the cytosol in an ATP-dependent fashion.
T4 475-697 Sentence denotes These findings raise the strong possibility that the two substrate classes are transported by the same mechanism but the precise identity of the trans-location machinery for each substrate class has not been fully defined.
T5 698-869 Sentence denotes Here we have investigated the mechanism by which a glycopeptide is exported from rat liver microsomes, and compare this to the export of free polymannose oligosaccharides.
T6 870-1106 Sentence denotes Using EGTA and the endoplasmic reticulum calcium mobilizing agents thapsigargicin and calcium ionophores A23187 and ionomycin, we show that glycopeptides, in contrast to oligosaccharides, are exported by a calcium-independent mechanism.
T7 1107-1264 Sentence denotes On the other hand, Mg(2+)is required in the assay for the transport of glycopeptide from mammalian microsomes which is in common with oligosaccharide export.
T8 1265-1650 Sentence denotes Deoxynojirimycin and castanospermine, inhibitors of ER glucosidases, when added to rat liver microsomes prior to loading with peptide that bears an N -glycosylation sequon, had no effect on the release of glucosylated glycopeptides from membranes, indicating that removal of the alpha-glucose units from the oligomannose glycan structure of the glycopeptide is not required for export.
T9 1651-1804 Sentence denotes In contrast to oligosaccharides, where transport is efficiently inhibited, mannosides were without effect or only weak inhibitors of glycopeptide export.
T10 1805-2118 Sentence denotes Taken together, these data suggest that glycopeptides are exported by a distinct mechanism from oligosaccharides of the polymannose-type and that the peptide moiety is an important structural determinant for glycopeptide export and capable of directing translocation of substrates to a specific transport pathway.
T1 0-116 Sentence denotes Glycopeptide export from mammalian microsomes is independent of calcium and is distinct from oligosaccharide export.
T2 117-284 Sentence denotes Glycopeptides are exported from the endoplasmic reticulum to the cytosol of eukaryotic membranes in an ATP- and cytosol-requiring process (Romisch and Ali, 1997, Proc.
T3 285-290 Sentence denotes Natl.
T4 291-296 Sentence denotes Acad.
T5 297-301 Sentence denotes Sci.
T6 302-321 Sentence denotes USA,94, 6730-6734).
T7 322-474 Sentence denotes Oligosaccharides of the polymannose-type are also exported from the endoplasmic reticulum of mammalian cells to the cytosol in an ATP-dependent fashion.
T8 475-697 Sentence denotes These findings raise the strong possibility that the two substrate classes are transported by the same mechanism but the precise identity of the trans-location machinery for each substrate class has not been fully defined.
T9 698-869 Sentence denotes Here we have investigated the mechanism by which a glycopeptide is exported from rat liver microsomes, and compare this to the export of free polymannose oligosaccharides.
T10 870-1106 Sentence denotes Using EGTA and the endoplasmic reticulum calcium mobilizing agents thapsigargicin and calcium ionophores A23187 and ionomycin, we show that glycopeptides, in contrast to oligosaccharides, are exported by a calcium-independent mechanism.
T11 1107-1264 Sentence denotes On the other hand, Mg(2+)is required in the assay for the transport of glycopeptide from mammalian microsomes which is in common with oligosaccharide export.
T12 1265-1650 Sentence denotes Deoxynojirimycin and castanospermine, inhibitors of ER glucosidases, when added to rat liver microsomes prior to loading with peptide that bears an N -glycosylation sequon, had no effect on the release of glucosylated glycopeptides from membranes, indicating that removal of the alpha-glucose units from the oligomannose glycan structure of the glycopeptide is not required for export.
T13 1651-1804 Sentence denotes In contrast to oligosaccharides, where transport is efficiently inhibited, mannosides were without effect or only weak inhibitors of glycopeptide export.
T14 1805-2118 Sentence denotes Taken together, these data suggest that glycopeptides are exported by a distinct mechanism from oligosaccharides of the polymannose-type and that the peptide moiety is an important structural determinant for glycopeptide export and capable of directing translocation of substrates to a specific transport pathway.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 1550-1557 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 783-788 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver
T2 1120-1124 http://purl.obolibrary.org/obo/MAT_0000091 denotes hand
T3 1352-1357 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 0-12 FMAID:82784 denotes Glycopeptide
_T2 0-12 FMAID:196778 denotes Glycopeptide
_T3 35-45 FMAID:165145 denotes microsomes
_T4 93-108 FMAID:82742 denotes oligosaccharide
_T5 93-108 FMAID:196731 denotes oligosaccharide
_T6 117-130 FMAID:82784 denotes Glycopeptides
_T7 117-130 FMAID:196778 denotes Glycopeptides
_T8 153-164 FMAID:66856 denotes endoplasmic
_T9 153-164 FMAID:165003 denotes endoplasmic
_T10 153-174 FMAID:63842 denotes endoplasmic reticulum
_T11 153-174 FMAID:188464 denotes endoplasmic reticulum
_T12 153-174 FMAID:199093 denotes endoplasmic reticulum
_T13 153-174 FMAID:162308 denotes endoplasmic reticulum
_T14 153-174 FMAID:80351 denotes endoplasmic reticulum
_T15 153-174 FMAID:165026 denotes endoplasmic reticulum
_T16 153-174 FMAID:165027 denotes endoplasmic reticulum
_T17 153-174 FMAID:66898 denotes endoplasmic reticulum
_T18 153-174 FMAID:210679 denotes endoplasmic reticulum
_T19 153-174 FMAID:212510 denotes endoplasmic reticulum
_T20 153-174 FMAID:165142 denotes endoplasmic reticulum
_T21 153-174 FMAID:67438 denotes endoplasmic reticulum
_T22 153-174 FMAID:165250 denotes endoplasmic reticulum
_T23 153-174 FMAID:67429 denotes endoplasmic reticulum
_T24 153-174 FMAID:165144 denotes endoplasmic reticulum
_T25 153-174 FMAID:210694 denotes endoplasmic reticulum
_T26 153-174 FMAID:211269 denotes endoplasmic reticulum
_T27 153-174 FMAID:66897 denotes endoplasmic reticulum
_T28 153-177 FMAID:165141 denotes endoplasmic reticulum to
_T29 153-177 FMAID:67434 denotes endoplasmic reticulum to
_T30 153-177 FMAID:210706 denotes endoplasmic reticulum to
_T31 165-174 FMAID:94520 denotes reticulum
_T32 165-174 FMAID:7646 denotes reticulum
_T33 182-189 FMAID:256055 denotes cytosol
_T34 204-213 FMAID:93573 denotes membranes
_T35 204-213 FMAID:30322 denotes membranes
_T36 204-213 FMAID:167608 denotes membranes
_T37 204-213 FMAID:7145 denotes membranes
_T38 229-236 FMAID:256055 denotes cytosol
_T39 322-338 FMAID:196731 denotes Oligosaccharides
_T40 322-338 FMAID:82742 denotes Oligosaccharides
_T41 390-401 FMAID:165003 denotes endoplasmic
_T42 390-401 FMAID:66856 denotes endoplasmic
_T43 390-411 FMAID:165142 denotes endoplasmic reticulum
_T44 390-411 FMAID:210694 denotes endoplasmic reticulum
_T45 390-411 FMAID:165250 denotes endoplasmic reticulum
_T46 390-411 FMAID:66897 denotes endoplasmic reticulum
_T47 390-411 FMAID:165141 denotes endoplasmic reticulum
_T48 390-411 FMAID:212510 denotes endoplasmic reticulum
_T49 390-411 FMAID:67438 denotes endoplasmic reticulum
_T50 390-411 FMAID:67434 denotes endoplasmic reticulum
_T51 390-411 FMAID:165027 denotes endoplasmic reticulum
_T52 390-411 FMAID:211269 denotes endoplasmic reticulum
_T53 390-411 FMAID:165144 denotes endoplasmic reticulum
_T54 390-411 FMAID:210679 denotes endoplasmic reticulum
_T55 390-411 FMAID:67429 denotes endoplasmic reticulum
_T56 390-411 FMAID:199093 denotes endoplasmic reticulum
_T57 390-411 FMAID:80351 denotes endoplasmic reticulum
_T58 390-411 FMAID:165026 denotes endoplasmic reticulum
_T59 390-411 FMAID:162308 denotes endoplasmic reticulum
_T60 390-411 FMAID:63842 denotes endoplasmic reticulum
_T61 390-411 FMAID:188464 denotes endoplasmic reticulum
_T62 390-411 FMAID:66898 denotes endoplasmic reticulum
_T63 402-411 FMAID:94520 denotes reticulum
_T64 402-411 FMAID:7646 denotes reticulum
_T65 425-430 FMAID:68646 denotes cells
_T66 425-430 FMAID:169002 denotes cells
_T67 438-445 FMAID:256055 denotes cytosol
_T68 749-761 FMAID:196778 denotes glycopeptide
_T69 749-761 FMAID:82784 denotes glycopeptide
_T70 783-788 FMAID:93672 denotes liver
_T71 783-788 FMAID:7197 denotes liver
_T72 789-799 FMAID:165145 denotes microsomes
_T73 852-868 FMAID:82742 denotes oligosaccharides
_T74 852-868 FMAID:196731 denotes oligosaccharides
_T75 889-900 FMAID:165003 denotes endoplasmic
_T76 889-900 FMAID:66856 denotes endoplasmic
_T77 889-910 FMAID:165142 denotes endoplasmic reticulum
_T78 889-910 FMAID:66897 denotes endoplasmic reticulum
_T79 889-910 FMAID:66898 denotes endoplasmic reticulum
_T80 889-910 FMAID:165027 denotes endoplasmic reticulum
_T81 889-910 FMAID:162308 denotes endoplasmic reticulum
_T82 889-910 FMAID:188464 denotes endoplasmic reticulum
_T83 889-910 FMAID:210679 denotes endoplasmic reticulum
_T84 889-910 FMAID:63842 denotes endoplasmic reticulum
_T85 889-910 FMAID:165026 denotes endoplasmic reticulum
_T86 889-910 FMAID:67438 denotes endoplasmic reticulum
_T87 889-910 FMAID:212510 denotes endoplasmic reticulum
_T88 889-910 FMAID:67434 denotes endoplasmic reticulum
_T89 889-910 FMAID:165141 denotes endoplasmic reticulum
_T90 889-910 FMAID:165144 denotes endoplasmic reticulum
_T91 889-910 FMAID:210694 denotes endoplasmic reticulum
_T92 889-910 FMAID:211269 denotes endoplasmic reticulum
_T93 889-910 FMAID:165250 denotes endoplasmic reticulum
_T94 889-910 FMAID:199093 denotes endoplasmic reticulum
_T95 889-910 FMAID:67429 denotes endoplasmic reticulum
_T96 889-910 FMAID:80351 denotes endoplasmic reticulum
_T97 901-910 FMAID:94520 denotes reticulum
_T98 901-910 FMAID:7646 denotes reticulum
_T99 1010-1023 FMAID:82784 denotes glycopeptides
_T100 1010-1023 FMAID:196778 denotes glycopeptides
_T101 1040-1056 FMAID:82742 denotes oligosaccharides
_T102 1040-1056 FMAID:196731 denotes oligosaccharides
_T103 1120-1124 FMAID:97627 denotes hand
_T104 1120-1124 FMAID:9712 denotes hand
_T105 1178-1190 FMAID:82784 denotes glycopeptide
_T106 1178-1190 FMAID:196778 denotes glycopeptide
_T107 1206-1216 FMAID:165145 denotes microsomes
_T108 1241-1256 FMAID:196731 denotes oligosaccharide
_T109 1241-1256 FMAID:82742 denotes oligosaccharide
_T110 1339-1344 FMAID:177242 denotes added
_T111 1352-1357 FMAID:7197 denotes liver
_T112 1352-1357 FMAID:93672 denotes liver
_T113 1358-1368 FMAID:165145 denotes microsomes
_T114 1483-1496 FMAID:196778 denotes glycopeptides
_T115 1483-1496 FMAID:82784 denotes glycopeptides
_T116 1502-1511 FMAID:30322 denotes membranes
_T117 1502-1511 FMAID:93573 denotes membranes
_T118 1502-1511 FMAID:7145 denotes membranes
_T119 1502-1511 FMAID:167608 denotes membranes
_T120 1550-1557 FMAID:196732 denotes glucose
_T121 1550-1557 FMAID:82743 denotes glucose
_T122 1610-1622 FMAID:82784 denotes glycopeptide
_T123 1610-1622 FMAID:196778 denotes glycopeptide
_T124 1666-1682 FMAID:82742 denotes oligosaccharides
_T125 1666-1682 FMAID:196731 denotes oligosaccharides
_T126 1784-1796 FMAID:196778 denotes glycopeptide
_T127 1784-1796 FMAID:82784 denotes glycopeptide
_T128 1845-1858 FMAID:82784 denotes glycopeptides
_T129 1845-1858 FMAID:196778 denotes glycopeptides
_T130 1901-1917 FMAID:196731 denotes oligosaccharides
_T131 1901-1917 FMAID:82742 denotes oligosaccharides
_T132 2013-2025 FMAID:82784 denotes glycopeptide
_T133 2013-2025 FMAID:196778 denotes glycopeptide

uniprot-human

Id Subject Object Predicate Lexical cue
T1 1317-1319 http://www.uniprot.org/uniprot/P03372 denotes ER

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 279-283 http://www.uniprot.org/uniprot/P33587 denotes Proc
T2 291-295 http://www.uniprot.org/uniprot/Q07417 denotes Acad
T3 1317-1319 http://www.uniprot.org/uniprot/P19785 denotes ER

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 193-203 http://purl.bioontology.org/ontology/NCBITAXON/2759 denotes eukaryotic
T2 425-430 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T3 481-489 http://purl.bioontology.org/ontology/STY/T033 denotes findings
T4 578-587 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanism
T5 728-737 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanism
T6 1096-1105 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanism
T7 1886-1895 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanism

GO-BP

Id Subject Object Predicate Lexical cue
T1 153-189 http://purl.obolibrary.org/obo/GO_0046967 denotes endoplasmic reticulum to the cytosol
T2 153-189 http://purl.obolibrary.org/obo/GO_1903513 denotes endoplasmic reticulum to the cytosol
T3 291-295 http://purl.obolibrary.org/obo/GO_0070238 denotes Acad
T4 554-565 http://purl.obolibrary.org/obo/GO_0006810 denotes transported
T5 1165-1174 http://purl.obolibrary.org/obo/GO_0006810 denotes transport
T6 1690-1699 http://purl.obolibrary.org/obo/GO_0006810 denotes transport
T7 2100-2109 http://purl.obolibrary.org/obo/GO_0006810 denotes transport
T8 911-929 http://purl.obolibrary.org/obo/GO_0051209 denotes calcium mobilizing
T9 964-974 http://purl.obolibrary.org/obo/GO_0022809 denotes ionophores
T10 1416-1429 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

GO-CC

Id Subject Object Predicate Lexical cue
T1 153-174 http://purl.obolibrary.org/obo/GO_0005783 denotes endoplasmic reticulum
T2 390-411 http://purl.obolibrary.org/obo/GO_0005783 denotes endoplasmic reticulum
T3 889-910 http://purl.obolibrary.org/obo/GO_0005783 denotes endoplasmic reticulum
T4 182-189 http://purl.obolibrary.org/obo/GO_0005829 denotes cytosol
T5 229-236 http://purl.obolibrary.org/obo/GO_0005829 denotes cytosol
T6 438-445 http://purl.obolibrary.org/obo/GO_0005829 denotes cytosol
T7 204-213 http://purl.obolibrary.org/obo/GO_0016020 denotes membranes
T8 1502-1511 http://purl.obolibrary.org/obo/GO_0016020 denotes membranes
T9 425-430 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T10 1317-1319 http://purl.obolibrary.org/obo/GO_0005783 denotes ER

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 783-788 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T2 1352-1357 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 153-174 http://edamontology.org/topic_0616 denotes endoplasmic reticulum
T2 193-203 http://edamontology.org/topic_2818 denotes eukaryotic
T3 390-411 http://edamontology.org/topic_0616 denotes endoplasmic reticulum
T4 889-910 http://edamontology.org/topic_0616 denotes endoplasmic reticulum
T5 1391-1398 http://edamontology.org/topic_0154 denotes peptide
T6 1955-1962 http://edamontology.org/topic_0154 denotes peptide
T7 1986-2008 http://edamontology.org/topic_1317 denotes structural determinant
T8 1986-2008 http://edamontology.org/topic_2226 denotes structural determinant
T9 2110-2117 http://edamontology.org/topic_0602 denotes pathway

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 247-254 http://edamontology.org/operation_2409 denotes process
T2 247-254 http://edamontology.org/operation_0004 denotes process
T3 1378-1385 http://edamontology.org/operation_1812 denotes loading
T4 1391-1398 http://edamontology.org/data_2906 denotes peptide
T5 1593-1602 http://edamontology.org/data_0883 denotes structure
T6 1827-1831 http://edamontology.org/data_0006 denotes data
T7 1955-1962 http://edamontology.org/data_2906 denotes peptide
T8 1986-1996 http://edamontology.org/data_0883 denotes structural
T9 2110-2117 http://edamontology.org/data_2600 denotes pathway

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 783-788 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver
T2 1120-1124 http://purl.obolibrary.org/obo/MAT_0000091 denotes hand
T3 1352-1357 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 783-788 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
PD-UBERON-AE-B_T2 1352-1357 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 783-788 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097
T2 1120-1124 Body_part denotes hand http://purl.obolibrary.org/obo/MAT_0000091
T3 1352-1357 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 779-782 OrganismTaxon denotes rat 10114|10116
T3 1348-1351 OrganismTaxon denotes rat 10114|10116

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 165-174 Body_part denotes reticulum http://purl.obolibrary.org/obo/UBERON_0007361
T2 182-189 Body_part denotes cytosol http://purl.obolibrary.org/obo/GO_0005829
T3 204-213 Body_part denotes membranes http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T6 229-236 Body_part denotes cytosol http://purl.obolibrary.org/obo/GO_0005829
T7 402-411 Body_part denotes reticulum http://purl.obolibrary.org/obo/UBERON_0007361
T8 438-445 Body_part denotes cytosol http://purl.obolibrary.org/obo/GO_0005829
T9 783-788 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T10 901-910 Body_part denotes reticulum http://purl.obolibrary.org/obo/UBERON_0007361
T11 1120-1124 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T12 1352-1357 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T13 1502-1511 Body_part denotes membranes http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158