PubMed:10712549
Annnotations
Oryza-OGER
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 41-45 | http://id.nlm.nih.gov/mesh/D012275 | denotes | rice |
| T2 | 41-45 | http://purl.bioontology.org/ontology/RXNORM/1311040 | denotes | rice |
| T3 | 41-45 | http://www.ncbi.nlm.nih.gov/taxonomy/4530 | denotes | rice |
| T4 | 102-106 | http://id.nlm.nih.gov/mesh/D012275 | denotes | rice |
| T5 | 102-106 | http://purl.bioontology.org/ontology/RXNORM/1311040 | denotes | rice |
| T6 | 102-106 | http://www.ncbi.nlm.nih.gov/taxonomy/4530 | denotes | rice |
| T7 | 108-113 | http://id.nlm.nih.gov/mesh/D012275 | denotes | Oryza |
| T8 | 108-120 | http://www.ncbi.nlm.nih.gov/taxonomy/4530 | denotes | Oryza sativa |
| T9 | 108-120 | http://id.nlm.nih.gov/mesh/D012275 | denotes | Oryza sativa |
| T10 | 153-163 | http://purl.obolibrary.org/obo/CHEBI_18233 | denotes | xyloglucan |
| T11 | 153-163 | http://id.nlm.nih.gov/mesh/C029353 | denotes | xyloglucan |
| T12 | 153-163 | http://id.nlm.nih.gov/mesh/C029353 | denotes | xyloglucan |
| T13 | 153-184 | http://id.nlm.nih.gov/mesh/C073693 | denotes | xyloglucan endotransglycosylase |
| T14 | 194-198 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T15 | 194-198 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell |
| T16 | 194-203 | http://purl.obolibrary.org/obo/GO_0005618 | denotes | cell wall |
| T17 | 199-203 | http://purl.obolibrary.org/obo/UBERON_0000060 | denotes | wall |
| T18 | 231-234 | http://purl.obolibrary.org/obo/PR_Q9NZC7 | denotes | for |
| T19 | 231-234 | http://purl.obolibrary.org/obo/PR_000001036 | denotes | for |
| T20 | 235-239 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T21 | 235-239 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell |
| T22 | 235-250 | http://purl.obolibrary.org/obo/GO_0009826 | denotes | cell elongation |
| T23 | 257-261 | http://id.nlm.nih.gov/mesh/D012275 | denotes | rice |
| T24 | 257-261 | http://purl.bioontology.org/ontology/RXNORM/1311040 | denotes | rice |
| T25 | 257-261 | http://www.ncbi.nlm.nih.gov/taxonomy/4530 | denotes | rice |
| T26 | 275-278 | http://www.uniprot.org/uniprot/P18117 | denotes | XTR |
| T27 | 287-293 | XTH2 | denotes | OsXTR1 |
| T28 | 295-301 | XTH11 | denotes | OsXTR2 |
| T29 | 300-301 | AMT1;3 | denotes | 2 |
| T30 | 303-309 | XTH23 | denotes | OsXTR3 |
| T31 | 308-309 | AMT1;2 | denotes | 3 |
| T32 | 311-314 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T33 | 311-314 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T34 | 315-321 | XTH3 | denotes | OsXTR4 |
| T35 | 337-340 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T36 | 337-340 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T37 | 370-374 | http://id.nlm.nih.gov/mesh/D012275 | denotes | rice |
| T38 | 370-374 | http://purl.bioontology.org/ontology/RXNORM/1311040 | denotes | rice |
| T39 | 370-374 | http://www.ncbi.nlm.nih.gov/taxonomy/4530 | denotes | rice |
| T40 | 375-381 | http://id.nlm.nih.gov/mesh/D010944 | denotes | plants |
| T41 | 421-424 | http://www.uniprot.org/uniprot/P18117 | denotes | XTR |
| T42 | 460-465 | http://purl.obolibrary.org/obo/UBERON_0003103 | denotes | organ |
| T43 | 460-465 | http://purl.obolibrary.org/obo/UBERON_0000062 | denotes | organ |
| T44 | 478-481 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T45 | 478-481 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T46 | 503-508 | http://id.nlm.nih.gov/mesh/D010944 | denotes | plant |
| T47 | 503-517 | http://id.nlm.nih.gov/mesh/D010937 | denotes | plant hormones |
| T48 | 503-517 | http://purl.obolibrary.org/obo/CHEBI_37848 | denotes | plant hormones |
| T49 | 509-517 | http://id.nlm.nih.gov/mesh/D006728 | denotes | hormones |
| T50 | 509-517 | http://purl.obolibrary.org/obo/CHEBI_24621 | denotes | hormones |
| T51 | 509-517 | http://id.nlm.nih.gov/mesh/D006728 | denotes | hormones |
| T52 | 519-525 | XTH2 | denotes | OsXTR1 |
| T53 | 526-529 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T54 | 526-529 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T55 | 530-536 | XTH23 | denotes | OsXTR3 |
| T56 | 535-536 | AMT1;2 | denotes | 3 |
| T57 | 545-554 | http://purl.obolibrary.org/obo/SO_0000119 | denotes | regulated |
| T58 | 558-569 | http://purl.obolibrary.org/obo/CHEBI_28833 | denotes | gibberellin |
| T59 | 558-569 | http://purl.obolibrary.org/obo/CHEBI_24250 | denotes | gibberellin |
| T60 | 570-573 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T61 | 570-573 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T62 | 574-590 | http://id.nlm.nih.gov/mesh/D060406 | denotes | brassinosteroids |
| T63 | 574-590 | http://purl.obolibrary.org/obo/CHEBI_22921 | denotes | brassinosteroids |
| T64 | 574-590 | http://id.nlm.nih.gov/mesh/D060406 | denotes | brassinosteroids |
| T65 | 600-606 | XTH11 | denotes | OsXTR2 |
| T66 | 605-606 | AMT1;3 | denotes | 2 |
| T67 | 607-610 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T68 | 607-610 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T69 | 611-617 | XTH3 | denotes | OsXTR4 |
| T70 | 652-660 | http://id.nlm.nih.gov/mesh/D006728 | denotes | hormones |
| T71 | 652-660 | http://purl.obolibrary.org/obo/CHEBI_24621 | denotes | hormones |
| T72 | 652-660 | http://id.nlm.nih.gov/mesh/D006728 | denotes | hormones |
| T73 | 685-688 | http://www.uniprot.org/uniprot/P18117 | denotes | XTR |
| T74 | 695-698 | http://purl.obolibrary.org/obo/PR_000017371 | denotes | was |
| T75 | 695-698 | http://purl.obolibrary.org/obo/PR_P42768 | denotes | was |
| T76 | 695-698 | http://purl.obolibrary.org/obo/PR_P70315 | denotes | was |
| T77 | 695-698 | http://id.nlm.nih.gov/mesh/D014923 | denotes | was |
| T78 | 777-783 | XTH2 | denotes | OsXTR1 |
| T79 | 784-787 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T80 | 784-787 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T81 | 788-794 | XTH23 | denotes | OsXTR3 |
| T82 | 793-794 | AMT1;2 | denotes | 3 |
| T83 | 869-875 | XTH11 | denotes | OsXTR2 |
| T84 | 874-875 | AMT1;3 | denotes | 2 |
| T85 | 876-879 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T86 | 876-879 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T87 | 880-886 | XTH3 | denotes | OsXTR4 |
| T88 | 911-914 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T89 | 911-914 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T90 | 933-936 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T91 | 933-936 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T92 | 1035-1041 | XTH2 | denotes | OsXTR1 |
| T93 | 1042-1045 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T94 | 1042-1045 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T95 | 1046-1052 | XTH23 | denotes | OsXTR3 |
| T96 | 1051-1052 | AMT1;2 | denotes | 3 |
| T97 | 1124-1127 | http://purl.obolibrary.org/obo/PR_000017371 | denotes | was |
| T98 | 1124-1127 | http://purl.obolibrary.org/obo/PR_P42768 | denotes | was |
| T99 | 1124-1127 | http://purl.obolibrary.org/obo/PR_P70315 | denotes | was |
| T100 | 1124-1127 | http://id.nlm.nih.gov/mesh/D014923 | denotes | was |
| T101 | 1137-1140 | http://purl.obolibrary.org/obo/PR_Q9NZC7 | denotes | for |
| T102 | 1137-1140 | http://purl.obolibrary.org/obo/PR_000001036 | denotes | for |
| T103 | 1141-1147 | XTH11 | denotes | OsXTR2 |
| T104 | 1146-1147 | AMT1;3 | denotes | 2 |
| T105 | 1148-1151 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T106 | 1148-1151 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T107 | 1152-1158 | XTH3 | denotes | OsXTR4 |
| T108 | 1215-1221 | XTH2 | denotes | OsXTR1 |
| T109 | 1222-1225 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T110 | 1222-1225 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T111 | 1226-1232 | XTH23 | denotes | OsXTR3 |
| T112 | 1231-1232 | AMT1;2 | denotes | 3 |
| T113 | 1233-1236 | http://web.expasy.org/cellosaurus/CVCL_E773 | denotes | may |
| T114 | 1270-1274 | http://id.nlm.nih.gov/mesh/D012275 | denotes | rice |
| T115 | 1270-1274 | http://purl.bioontology.org/ontology/RXNORM/1311040 | denotes | rice |
| T116 | 1270-1274 | http://www.ncbi.nlm.nih.gov/taxonomy/4530 | denotes | rice |
pqqtest_sentence
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 438-456 | cand:PO:0007056-pattern formation stage | denotes | different patterns |
| M_1 | 438-456 | cand:PPO:0002323-reproductive structures present | denotes | different patterns |
| M_2 | 438-456 | cand:PO:0007525-establishment of tissue systems stage | denotes | different patterns |
| M_3 | 438-456 | cand:TO:0000754-cardinal organ part morphology trait | denotes | different patterns |
| M_4 | 438-456 | cand:TO:0000736-plant organ morphology trait | denotes | different patterns |
| M_5 | 438-456 | cand:TO:0000738-plant axis morphology trait | denotes | different patterns |
| M_6 | 438-456 | cand:TO:0000670-floret number | denotes | different patterns |
| M_7 | 438-456 | cand:funRiceGene:85-seed shattering | denotes | different patterns |
| M_8 | 438-456 | cand:TO:0001073-fruit shattering | denotes | different patterns |
| M_9 | 438-456 | cand:TO:0000904-seed coat pattern | denotes | different patterns |
| M_10 | 438-456 | cand:PO:0020149-quiescent center | denotes | different patterns |
| M_11 | 421-424 | GeneID:NA | denotes | XTR |
| T61601 | 832-847 | xzyao:23709 | denotes | elongating zone |
| T6290 | 235-250 | funRiceGene:473, xzyao:13869 | denotes | cell elongation |
| T25766 | 108-120 | xzyao:1553 | denotes | Oryza sativa |
| T8169 | 370-381 | xzyao:23828 | denotes | rice plants |
| T68083 | 558-569 | funRiceGene:345 | denotes | gibberellin |
| T1868 | 194-203 | funRiceGene:126, xzyao:40746 | denotes | cell wall |
| T94534 | 558-569 | funRiceGene:391 | denotes | gibberellin |
| T53010 | 347-366 | xzyao:38569 | denotes | expression patterns |
| T73224 | 755-775 | xzyao:32061 | denotes | developmental stages |
| T41214 | 503-517 | xzyao:33520 | denotes | plant hormones |
| T89344 | 194-220 | xzyao:22360 | denotes | cell wall-loosening enzyme |
| T59261 | 438-456 | xzyao:11229 | denotes | different patterns |
| M_12 | 1073-1079 | funRiceGene:501 | denotes | height |
| M_13 | 315-321 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_14 | 611-617 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_15 | 880-886 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_16 | 1152-1158 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_17 | 153-184 | hunflair:NA:Gene | denotes | xyloglucan endotransglycosylase |
| M_18 | 574-590 | hunflair:NA:Chemical | denotes | brassinosteroids |
| M_19 | 275-278 | hunflair:NA:Gene | denotes | XTR |
| M_20 | 421-424 | hunflair:NA:Gene | denotes | XTR |
| M_21 | 685-688 | hunflair:NA:Gene | denotes | XTR |
| M_22 | 20-23 | hunflair:NA:Gene | denotes | XET |
| M_23 | 186-189 | hunflair:NA:Gene | denotes | XET |
| M_24 | 262-265 | hunflair:NA:Gene | denotes | XET |
| M_25 | 287-293 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_26 | 519-525 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_27 | 777-783 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_28 | 1035-1041 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_29 | 1215-1221 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_30 | 303-309 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_31 | 530-536 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_32 | 788-794 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_33 | 1046-1052 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_34 | 1226-1232 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_35 | 108-120 | hunflair:NA:Species | denotes | Oryza sativa |
| M_36 | 295-301 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_37 | 600-606 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_38 | 869-875 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_39 | 1141-1147 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_40 | 558-569 | hunflair:NA:Gene | denotes | gibberellin |
| M_41 | 41-45 | hunflair:NA:Species | denotes | rice |
| M_42 | 102-106 | hunflair:NA:Species | denotes | rice |
| M_43 | 257-261 | hunflair:NA:Species | denotes | rice |
| M_44 | 370-374 | hunflair:NA:Species | denotes | rice |
| M_45 | 1270-1274 | hunflair:NA:Species | denotes | rice |
| M_46 | 558-569 | hunflair:NA:Chemical | denotes | gibberellin |
| M_47 | 574-590 | pubtator:MESH:D060406:Chemical | denotes | brassinosteroids |
| M_48 | 558-569 | pubtator:MESH:D005875:Chemical | denotes | gibberellin |
| M_49 | 41-45 | pubtator:4530:Species | denotes | rice |
| M_50 | 102-106 | pubtator:4530:Species | denotes | rice |
| M_51 | 257-261 | pubtator:4530:Species | denotes | rice |
| M_52 | 370-374 | pubtator:4530:Species | denotes | rice |
| M_53 | 1270-1274 | pubtator:4530:Species | denotes | rice |
| M_54 | 108-122 | pubtator:4530:Species | denotes | Oryza sativa L |
21k_plant_trait_mention
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_24 | 558-569 | hunflair:NA:Gene | denotes | gibberellin |
| M_25 | 303-309 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_26 | 530-536 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_27 | 788-794 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_28 | 1046-1052 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_29 | 1226-1232 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_30 | 153-184 | hunflair:NA:Gene | denotes | xyloglucan endotransglycosylase |
| M_31 | 315-321 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_32 | 611-617 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_33 | 880-886 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_34 | 1152-1158 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_35 | 20-23 | hunflair:NA:Gene | denotes | XET |
| M_36 | 186-189 | hunflair:NA:Gene | denotes | XET |
| M_37 | 262-265 | hunflair:NA:Gene | denotes | XET |
| M_0 | 1073-1079 | funRiceGene:501 | denotes | height |
| M_1 | 558-569 | funRiceGene:391 | denotes | gibberellin |
| M_2 | 558-569 | funRiceGene:345 | denotes | gibberellin |
| M_3 | 720-741 | xzyao:16731 | denotes | elongating internodes |
| M_4 | 287-293 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_5 | 519-525 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_6 | 777-783 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_7 | 1035-1041 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_8 | 1215-1221 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_9 | 295-301 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_10 | 600-606 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_11 | 869-875 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_12 | 1141-1147 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_13 | 108-120 | hunflair:NA:Species | denotes | Oryza sativa |
| M_14 | 275-278 | hunflair:NA:Gene | denotes | XTR |
| M_15 | 421-424 | hunflair:NA:Gene | denotes | XTR |
| M_16 | 685-688 | hunflair:NA:Gene | denotes | XTR |
| M_17 | 558-569 | hunflair:NA:Chemical | denotes | gibberellin |
| M_18 | 574-590 | hunflair:NA:Chemical | denotes | brassinosteroids |
| M_19 | 41-45 | hunflair:NA:Species | denotes | rice |
| M_20 | 102-106 | hunflair:NA:Species | denotes | rice |
| M_21 | 257-261 | hunflair:NA:Species | denotes | rice |
| M_22 | 370-374 | hunflair:NA:Species | denotes | rice |
| M_23 | 1270-1274 | hunflair:NA:Species | denotes | rice |
| M_38 | 574-590 | pubtator:MESH:D060406:Chemical | denotes | brassinosteroids |
| M_39 | 558-569 | pubtator:MESH:D005875:Chemical | denotes | gibberellin |
| M_40 | 41-45 | pubtator:4530:Species | denotes | rice |
| M_41 | 102-106 | pubtator:4530:Species | denotes | rice |
| M_42 | 257-261 | pubtator:4530:Species | denotes | rice |
| M_43 | 370-374 | pubtator:4530:Species | denotes | rice |
| M_44 | 1270-1274 | pubtator:4530:Species | denotes | rice |
| M_45 | 108-122 | pubtator:4530:Species | denotes | Oryza sativa L |
OryzaGP_2021_v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 287-293 | http://identifiers.org/oryzabase.gene/6500 | denotes | OsXTR1 |
| T2 | 295-301 | http://identifiers.org/oryzabase.gene/6491 | denotes | OsXTR2 |
| T3 | 303-309 | http://identifiers.org/oryzabase.gene/6504 | denotes | OsXTR3 |
| T4 | 315-321 | http://identifiers.org/oryzabase.gene/6511 | denotes | OsXTR4 |
| T5 | 519-525 | http://identifiers.org/oryzabase.gene/6500 | denotes | OsXTR1 |
| T6 | 530-536 | http://identifiers.org/oryzabase.gene/6504 | denotes | OsXTR3 |
| T7 | 600-606 | http://identifiers.org/oryzabase.gene/6491 | denotes | OsXTR2 |
| T8 | 611-617 | http://identifiers.org/oryzabase.gene/6511 | denotes | OsXTR4 |
| T9 | 777-783 | http://identifiers.org/oryzabase.gene/6500 | denotes | OsXTR1 |
| T10 | 788-794 | http://identifiers.org/oryzabase.gene/6504 | denotes | OsXTR3 |
| T11 | 869-875 | http://identifiers.org/oryzabase.gene/6491 | denotes | OsXTR2 |
| T12 | 880-886 | http://identifiers.org/oryzabase.gene/6511 | denotes | OsXTR4 |
| T13 | 1035-1041 | http://identifiers.org/oryzabase.gene/6500 | denotes | OsXTR1 |
| T14 | 1046-1052 | http://identifiers.org/oryzabase.gene/6504 | denotes | OsXTR3 |
| T15 | 1141-1147 | http://identifiers.org/oryzabase.gene/6491 | denotes | OsXTR2 |
| T16 | 1152-1158 | http://identifiers.org/oryzabase.gene/6511 | denotes | OsXTR4 |
| T17 | 1215-1221 | http://identifiers.org/oryzabase.gene/6500 | denotes | OsXTR1 |
| T18 | 1226-1232 | http://identifiers.org/oryzabase.gene/6504 | denotes | OsXTR3 |
| T72746 | 287-293 | http://identifiers.org/rapdb.locus/Os11g0539200 | denotes | OsXTR1 |
| T76575 | 295-301 | http://identifiers.org/rapdb.locus/Os06g0696400 | denotes | OsXTR2 |
| T34821 | 303-309 | http://identifiers.org/rapdb.locus/Os02g0696500 | denotes | OsXTR3 |
| T60211 | 315-321 | http://identifiers.org/rapdb.locus/Os04g0631200 | denotes | OsXTR4 |
| T67966 | 519-525 | http://identifiers.org/rapdb.locus/Os11g0539200 | denotes | OsXTR1 |
| T57173 | 530-536 | http://identifiers.org/rapdb.locus/Os02g0696500 | denotes | OsXTR3 |
| T59784 | 600-606 | http://identifiers.org/rapdb.locus/Os06g0696400 | denotes | OsXTR2 |
| T56393 | 611-617 | http://identifiers.org/rapdb.locus/Os04g0631200 | denotes | OsXTR4 |
| T92229 | 777-783 | http://identifiers.org/rapdb.locus/Os11g0539200 | denotes | OsXTR1 |
| T2064 | 788-794 | http://identifiers.org/rapdb.locus/Os02g0696500 | denotes | OsXTR3 |
| T76477 | 869-875 | http://identifiers.org/rapdb.locus/Os06g0696400 | denotes | OsXTR2 |
| T69222 | 880-886 | http://identifiers.org/rapdb.locus/Os04g0631200 | denotes | OsXTR4 |
| T5737 | 1035-1041 | http://identifiers.org/rapdb.locus/Os11g0539200 | denotes | OsXTR1 |
| T2242 | 1046-1052 | http://identifiers.org/rapdb.locus/Os02g0696500 | denotes | OsXTR3 |
| T15720 | 1141-1147 | http://identifiers.org/rapdb.locus/Os06g0696400 | denotes | OsXTR2 |
| T60187 | 1152-1158 | http://identifiers.org/rapdb.locus/Os04g0631200 | denotes | OsXTR4 |
| T64352 | 1215-1221 | http://identifiers.org/rapdb.locus/Os11g0539200 | denotes | OsXTR1 |
| T62092 | 1226-1232 | http://identifiers.org/rapdb.locus/Os02g0696500 | denotes | OsXTR3 |
PMID_GLOBAL
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-46 | Sentence | denotes | Characterization of XET-related genes of rice. |
| T2 | 47-251 | Sentence | denotes | To elucidate the mechanism of internodal elongation in rice (Oryza sativa L.), we analyzed genes encoding xyloglucan endotransglycosylase (XET), a cell wall-loosening enzyme essential for cell elongation. |
| T3 | 252-393 | Sentence | denotes | Four rice XET-related (XTR) genes, OsXTR1, OsXTR2, OsXTR3, and OsXTR4, were isolated and their expression patterns in rice plants determined. |
| T4 | 394-518 | Sentence | denotes | The expression of the four XTR genes showed different patterns of organ specificity and responses to several plant hormones. |
| T5 | 519-661 | Sentence | denotes | OsXTR1 and OsXTR3 were up-regulated by gibberellin and brassinosteroids, whereas OsXTR2 and OsXTR4 showed no clear response to these hormones. |
| T6 | 662-776 | Sentence | denotes | Expression of the four XTR genes was also investigated in elongating internodes at different developmental stages. |
| T7 | 777-968 | Sentence | denotes | OsXTR1 and OsXTR3 were preferentially expressed in the elongating zone of internodes, while OsXTR2 and OsXTR4 were expressed in nodes and in the divisional and elongating zones of internodes. |
| T8 | 969-1159 | Sentence | denotes | In three genetic mutants with abnormal heights, the expression of OsXTR1 and OsXTR3 correlated with the height of the mutants, whereas no such correlation was observed for OsXTR2 and OsXTR4. |
| T9 | 1160-1275 | Sentence | denotes | Based on these observations, we discuss the roles that OsXTR1 and OsXTR3 may play in internodal elongation in rice. |
OryzaGP_2021_FLAIR
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 108-120 | hunflair:NA:Species | denotes | Oryza sativa |
| M_1 | 287-293 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_2 | 519-525 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_3 | 777-783 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_4 | 1035-1041 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_5 | 1215-1221 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_6 | 20-23 | hunflair:NA:Gene | denotes | XET |
| M_7 | 186-189 | hunflair:NA:Gene | denotes | XET |
| M_8 | 262-265 | hunflair:NA:Gene | denotes | XET |
| M_9 | 303-309 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_10 | 530-536 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_11 | 788-794 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_12 | 1046-1052 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_13 | 1226-1232 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_14 | 41-45 | hunflair:NA:Species | denotes | rice |
| M_15 | 102-106 | hunflair:NA:Species | denotes | rice |
| M_16 | 257-261 | hunflair:NA:Species | denotes | rice |
| M_17 | 370-374 | hunflair:NA:Species | denotes | rice |
| M_18 | 1270-1274 | hunflair:NA:Species | denotes | rice |
| M_19 | 558-569 | hunflair:NA:Chemical | denotes | gibberellin |
| M_20 | 295-301 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_21 | 600-606 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_22 | 869-875 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_23 | 1141-1147 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_24 | 275-278 | hunflair:NA:Gene | denotes | XTR |
| M_25 | 421-424 | hunflair:NA:Gene | denotes | XTR |
| M_26 | 685-688 | hunflair:NA:Gene | denotes | XTR |
| M_27 | 153-184 | hunflair:NA:Gene | denotes | xyloglucan endotransglycosylase |
| M_28 | 574-590 | hunflair:NA:Chemical | denotes | brassinosteroids |
| M_29 | 315-321 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_30 | 611-617 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_31 | 880-886 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_32 | 1152-1158 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_33 | 558-569 | hunflair:NA:Gene | denotes | gibberellin |
OryzaGP_2021
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 287-293 | http://identifiers.org/oryzabase.gene/6500 | denotes | OsXTR1 |
| T2 | 295-301 | http://identifiers.org/oryzabase.gene/6491 | denotes | OsXTR2 |
| T3 | 303-309 | http://identifiers.org/oryzabase.gene/6504 | denotes | OsXTR3 |
| T4 | 315-321 | http://identifiers.org/oryzabase.gene/6511 | denotes | OsXTR4 |
| T5 | 519-525 | http://identifiers.org/oryzabase.gene/6500 | denotes | OsXTR1 |
| T6 | 530-536 | http://identifiers.org/oryzabase.gene/6504 | denotes | OsXTR3 |
| T7 | 600-606 | http://identifiers.org/oryzabase.gene/6491 | denotes | OsXTR2 |
| T8 | 611-617 | http://identifiers.org/oryzabase.gene/6511 | denotes | OsXTR4 |
| T9 | 777-783 | http://identifiers.org/oryzabase.gene/6500 | denotes | OsXTR1 |
| T10 | 788-794 | http://identifiers.org/oryzabase.gene/6504 | denotes | OsXTR3 |
| T11 | 869-875 | http://identifiers.org/oryzabase.gene/6491 | denotes | OsXTR2 |
| T12 | 880-886 | http://identifiers.org/oryzabase.gene/6511 | denotes | OsXTR4 |
| T13 | 1035-1041 | http://identifiers.org/oryzabase.gene/6500 | denotes | OsXTR1 |
| T14 | 1046-1052 | http://identifiers.org/oryzabase.gene/6504 | denotes | OsXTR3 |
| T15 | 1141-1147 | http://identifiers.org/oryzabase.gene/6491 | denotes | OsXTR2 |
| T16 | 1152-1158 | http://identifiers.org/oryzabase.gene/6511 | denotes | OsXTR4 |
| T17 | 1215-1221 | http://identifiers.org/oryzabase.gene/6500 | denotes | OsXTR1 |
| T18 | 1226-1232 | http://identifiers.org/oryzabase.gene/6504 | denotes | OsXTR3 |
| T5072 | 287-293 | http://identifiers.org/ricegap/LOC_Os11g33270 | denotes | OsXTR1 |
| T49082 | 295-301 | http://identifiers.org/ricegap/LOC_Os06g48160 | denotes | OsXTR2 |
| T10074 | 303-309 | http://identifiers.org/ricegap/LOC_Os02g46910 | denotes | OsXTR3 |
| T11332 | 315-321 | http://identifiers.org/ricegap/LOC_Os04g53950 | denotes | OsXTR4 |
| T27242 | 519-525 | http://identifiers.org/ricegap/LOC_Os11g33270 | denotes | OsXTR1 |
| T80702 | 530-536 | http://identifiers.org/ricegap/LOC_Os02g46910 | denotes | OsXTR3 |
| T37163 | 600-606 | http://identifiers.org/ricegap/LOC_Os06g48160 | denotes | OsXTR2 |
| T41111 | 611-617 | http://identifiers.org/ricegap/LOC_Os04g53950 | denotes | OsXTR4 |
| T25394 | 777-783 | http://identifiers.org/ricegap/LOC_Os11g33270 | denotes | OsXTR1 |
| T21479 | 788-794 | http://identifiers.org/ricegap/LOC_Os02g46910 | denotes | OsXTR3 |
| T31701 | 869-875 | http://identifiers.org/ricegap/LOC_Os06g48160 | denotes | OsXTR2 |
| T34259 | 880-886 | http://identifiers.org/ricegap/LOC_Os04g53950 | denotes | OsXTR4 |
| T65105 | 1035-1041 | http://identifiers.org/ricegap/LOC_Os11g33270 | denotes | OsXTR1 |
| T84325 | 1046-1052 | http://identifiers.org/ricegap/LOC_Os02g46910 | denotes | OsXTR3 |
| T90755 | 1141-1147 | http://identifiers.org/ricegap/LOC_Os06g48160 | denotes | OsXTR2 |
| T13321 | 1152-1158 | http://identifiers.org/ricegap/LOC_Os04g53950 | denotes | OsXTR4 |
| T67840 | 1215-1221 | http://identifiers.org/ricegap/LOC_Os11g33270 | denotes | OsXTR1 |
| T32807 | 1226-1232 | http://identifiers.org/ricegap/LOC_Os02g46910 | denotes | OsXTR3 |
| T44623 | 287-293 | http://identifiers.org/rapdb.locus/Os11g0539200 | denotes | OsXTR1 |
| T40660 | 295-301 | http://identifiers.org/rapdb.locus/Os06g0696400 | denotes | OsXTR2 |
| T45215 | 303-309 | http://identifiers.org/rapdb.locus/Os02g0696500 | denotes | OsXTR3 |
| T49039 | 315-321 | http://identifiers.org/rapdb.locus/Os04g0631200 | denotes | OsXTR4 |
| T46889 | 519-525 | http://identifiers.org/rapdb.locus/Os11g0539200 | denotes | OsXTR1 |
| T21826 | 530-536 | http://identifiers.org/rapdb.locus/Os02g0696500 | denotes | OsXTR3 |
| T67163 | 600-606 | http://identifiers.org/rapdb.locus/Os06g0696400 | denotes | OsXTR2 |
| T9904 | 611-617 | http://identifiers.org/rapdb.locus/Os04g0631200 | denotes | OsXTR4 |
| T94594 | 777-783 | http://identifiers.org/rapdb.locus/Os11g0539200 | denotes | OsXTR1 |
| T74279 | 788-794 | http://identifiers.org/rapdb.locus/Os02g0696500 | denotes | OsXTR3 |
| T37549 | 869-875 | http://identifiers.org/rapdb.locus/Os06g0696400 | denotes | OsXTR2 |
| T24223 | 880-886 | http://identifiers.org/rapdb.locus/Os04g0631200 | denotes | OsXTR4 |
| T30438 | 1035-1041 | http://identifiers.org/rapdb.locus/Os11g0539200 | denotes | OsXTR1 |
| T15335 | 1046-1052 | http://identifiers.org/rapdb.locus/Os02g0696500 | denotes | OsXTR3 |
| T82903 | 1141-1147 | http://identifiers.org/rapdb.locus/Os06g0696400 | denotes | OsXTR2 |
| T2056 | 1152-1158 | http://identifiers.org/rapdb.locus/Os04g0631200 | denotes | OsXTR4 |
| T47618 | 1215-1221 | http://identifiers.org/rapdb.locus/Os11g0539200 | denotes | OsXTR1 |
| T33141 | 1226-1232 | http://identifiers.org/rapdb.locus/Os02g0696500 | denotes | OsXTR3 |
| T40195 | 287-293 | http://identifiers.org/uniprot/E6Y2S0 | denotes | OsXTR1 |
| T4970 | 295-301 | http://identifiers.org/uniprot/Q56TP0 | denotes | OsXTR2 |
| T64784 | 303-309 | http://identifiers.org/uniprot/C5IG71 | denotes | OsXTR3 |
| T83998 | 303-309 | http://identifiers.org/uniprot/A6MZP8 | denotes | OsXTR3 |
| T24133 | 315-321 | http://identifiers.org/uniprot/Q25A17 | denotes | OsXTR4 |
| T76220 | 315-321 | http://identifiers.org/uniprot/B7ENX5 | denotes | OsXTR4 |
| T4843 | 519-525 | http://identifiers.org/uniprot/E6Y2S0 | denotes | OsXTR1 |
| T29696 | 530-536 | http://identifiers.org/uniprot/C5IG71 | denotes | OsXTR3 |
| T92370 | 530-536 | http://identifiers.org/uniprot/A6MZP8 | denotes | OsXTR3 |
| T93989 | 600-606 | http://identifiers.org/uniprot/Q56TP0 | denotes | OsXTR2 |
| T17234 | 611-617 | http://identifiers.org/uniprot/Q25A17 | denotes | OsXTR4 |
| T59236 | 611-617 | http://identifiers.org/uniprot/B7ENX5 | denotes | OsXTR4 |
| T54898 | 777-783 | http://identifiers.org/uniprot/E6Y2S0 | denotes | OsXTR1 |
| T70235 | 788-794 | http://identifiers.org/uniprot/C5IG71 | denotes | OsXTR3 |
| T12574 | 788-794 | http://identifiers.org/uniprot/A6MZP8 | denotes | OsXTR3 |
| T19210 | 869-875 | http://identifiers.org/uniprot/Q56TP0 | denotes | OsXTR2 |
| T13676 | 880-886 | http://identifiers.org/uniprot/Q25A17 | denotes | OsXTR4 |
| T67666 | 880-886 | http://identifiers.org/uniprot/B7ENX5 | denotes | OsXTR4 |
| T19 | 1035-1041 | http://identifiers.org/uniprot/E6Y2S0 | denotes | OsXTR1 |
| T20 | 1046-1052 | http://identifiers.org/uniprot/C5IG71 | denotes | OsXTR3 |
| T21 | 1046-1052 | http://identifiers.org/uniprot/A6MZP8 | denotes | OsXTR3 |
| T22 | 1141-1147 | http://identifiers.org/uniprot/Q56TP0 | denotes | OsXTR2 |
| T23 | 1152-1158 | http://identifiers.org/uniprot/Q25A17 | denotes | OsXTR4 |
| T24 | 1152-1158 | http://identifiers.org/uniprot/B7ENX5 | denotes | OsXTR4 |
| T25 | 1215-1221 | http://identifiers.org/uniprot/E6Y2S0 | denotes | OsXTR1 |
| T26 | 1226-1232 | http://identifiers.org/uniprot/C5IG71 | denotes | OsXTR3 |
| T27 | 1226-1232 | http://identifiers.org/uniprot/A6MZP8 | denotes | OsXTR3 |
| M_0 | 108-120 | hunflair:NA:Species | denotes | Oryza sativa |
| M_1 | 287-293 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_2 | 519-525 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_3 | 777-783 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_4 | 1035-1041 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_5 | 1215-1221 | hunflair:NA:Gene | denotes | OsXTR1 |
| M_6 | 20-23 | hunflair:NA:Gene | denotes | XET |
| M_7 | 186-189 | hunflair:NA:Gene | denotes | XET |
| M_8 | 262-265 | hunflair:NA:Gene | denotes | XET |
| M_9 | 303-309 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_10 | 530-536 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_11 | 788-794 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_12 | 1046-1052 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_13 | 1226-1232 | hunflair:NA:Gene | denotes | OsXTR3 |
| M_14 | 41-45 | hunflair:NA:Species | denotes | rice |
| M_15 | 102-106 | hunflair:NA:Species | denotes | rice |
| M_16 | 257-261 | hunflair:NA:Species | denotes | rice |
| M_17 | 370-374 | hunflair:NA:Species | denotes | rice |
| M_18 | 1270-1274 | hunflair:NA:Species | denotes | rice |
| M_19 | 558-569 | hunflair:NA:Chemical | denotes | gibberellin |
| M_20 | 295-301 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_21 | 600-606 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_22 | 869-875 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_23 | 1141-1147 | hunflair:NA:Gene | denotes | OsXTR2 |
| M_24 | 275-278 | hunflair:NA:Gene | denotes | XTR |
| M_25 | 421-424 | hunflair:NA:Gene | denotes | XTR |
| M_26 | 685-688 | hunflair:NA:Gene | denotes | XTR |
| M_27 | 153-184 | hunflair:NA:Gene | denotes | xyloglucan endotransglycosylase |
| M_28 | 574-590 | hunflair:NA:Chemical | denotes | brassinosteroids |
| M_29 | 315-321 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_30 | 611-617 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_31 | 880-886 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_32 | 1152-1158 | hunflair:NA:Gene | denotes | OsXTR4 |
| M_33 | 558-569 | hunflair:NA:Gene | denotes | gibberellin |
OryzaGP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 287-293 | gene | denotes | OsXTR1 |
| T2 | 295-301 | gene | denotes | OsXTR2 |
| T3 | 303-309 | gene | denotes | OsXTR3 |
| T4 | 315-321 | gene | denotes | OsXTR4 |
| T5 | 519-525 | gene | denotes | OsXTR1 |
| T6 | 530-536 | gene | denotes | OsXTR3 |
| T7 | 600-606 | gene | denotes | OsXTR2 |
| T8 | 611-617 | gene | denotes | OsXTR4 |
| T9 | 777-783 | gene | denotes | OsXTR1 |
| T10 | 788-794 | gene | denotes | OsXTR3 |
| T11 | 869-875 | gene | denotes | OsXTR2 |
| T12 | 880-886 | gene | denotes | OsXTR4 |
| T13 | 1035-1041 | gene | denotes | OsXTR1 |
| T14 | 1046-1052 | gene | denotes | OsXTR3 |
| T15 | 1141-1147 | gene | denotes | OsXTR2 |
| T16 | 1152-1158 | gene | denotes | OsXTR4 |
| T17 | 1215-1221 | gene | denotes | OsXTR1 |
| T18 | 1226-1232 | gene | denotes | OsXTR3 |