PubMed:10706858 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/10706858","sourcedb":"PubMed","sourceid":"10706858","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/10706858","text":"Genetic analysis, phenotypic diagnosis, and risk of venous thrombosis in families with inherited deficiencies of protein S.\nProtein S deficiency is a recognized risk factor for venous thrombosis. Of all the inherited thrombophilic conditions, it remains the most difficult to diagnose because of phenotypic variability, which can lead to inconclusive results. We have overcome this problem by studying a cohort of patients from a single center where the diagnosis was confirmed at the genetic level. Twenty-eight index patients with protein S deficiency and a PROS1 gene defect were studied, together with 109 first-degree relatives. To avoid selection bias, we confined analysis of total and free protein S levels and thrombotic risk to the patients' relatives. In this group of relatives, a low free protein S level was the most reliable predictor of a PROS1 gene defect (sensitivity 97.7%, specificity 100%). First-degree relatives with a PROS1 gene defect had a 5.0-fold higher risk of thrombosis (95% confidence interval, 1. 5-16.8) than those with a normal PROS1 gene and no other recognized thrombophilic defect. Although pregnancy/puerperium and immobility/trauma were important precipitating factors for thrombosis, almost half of the events were spontaneous. Relatives with splice-site or major structural defects in the PROS1 gene were more likely to have had a thrombotic event and had significantly lower total and free protein S levels than those relatives having missense mutations. We conclude that persons with PROS1 gene defects and protein S deficiency are at increased risk of thrombosis and that free protein S estimation offers the most reliable way of diagnosing the deficiency. (Blood. 2000;95:1935-1941)","tracks":[{"project":"NCBIDiseaseCorpus","denotations":[{"id":"T1","span":{"begin":52,"end":69},"obj":"SpecificDisease:D020246"},{"id":"T2","span":{"begin":97,"end":122},"obj":"SpecificDisease:D018455"},{"id":"T3","span":{"begin":124,"end":144},"obj":"SpecificDisease:D018455"},{"id":"T4","span":{"begin":177,"end":194},"obj":"SpecificDisease:D020246"},{"id":"T5","span":{"begin":217,"end":241},"obj":"DiseaseClass:D019851"},{"id":"T6","span":{"begin":533,"end":553},"obj":"SpecificDisease:D018455"},{"id":"T7","span":{"begin":560,"end":577},"obj":"SpecificDisease:OMIM:612336"},{"id":"T8","span":{"begin":855,"end":872},"obj":"SpecificDisease:OMIM:612336"},{"id":"T9","span":{"begin":942,"end":959},"obj":"SpecificDisease:OMIM:612336"},{"id":"T10","span":{"begin":990,"end":1000},"obj":"SpecificDisease:D013927"},{"id":"T11","span":{"begin":1098,"end":1118},"obj":"SpecificDisease:D019851"},{"id":"T12","span":{"begin":1165,"end":1171},"obj":"SpecificDisease:D014947"},{"id":"T13","span":{"begin":1213,"end":1223},"obj":"SpecificDisease:D013927"},{"id":"T14","span":{"begin":1316,"end":1341},"obj":"SpecificDisease:OMIM:612336"},{"id":"T15","span":{"begin":1528,"end":1546},"obj":"SpecificDisease:OMIM:612336"},{"id":"T16","span":{"begin":1551,"end":1571},"obj":"SpecificDisease:D018455"},{"id":"T17","span":{"begin":1597,"end":1607},"obj":"SpecificDisease:D013927"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T2","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T3","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T4","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T5","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T6","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T7","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T8","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T9","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T10","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T11","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T12","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T13","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T14","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T15","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T16","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T17","pred":"source","obj":"NCBIDiseaseCorpus"}]},{"project":"PubmedHPO","denotations":[{"id":"T1","span":{"begin":177,"end":194},"obj":"HP_0004936"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubmedHPO"}]},{"project":"DisGeNET","denotations":[{"id":"T0","span":{"begin":1528,"end":1533},"obj":"gene:5627"},{"id":"T1","span":{"begin":1551,"end":1571},"obj":"disease:C0242666"}],"relations":[{"id":"R1","pred":"associated_with","subj":"T0","obj":"T1"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"attributes":[{"subj":"T0","pred":"source","obj":"DisGeNET"},{"subj":"T1","pred":"source","obj":"DisGeNET"}]},{"project":"DisGeNET5_gene_disease","denotations":[{"id":"10706858-11#30#35#gene5627","span":{"begin":1528,"end":1533},"obj":"gene5627"},{"id":"10706858-11#53#73#diseaseC0242666","span":{"begin":1551,"end":1571},"obj":"diseaseC0242666"}],"relations":[{"id":"30#35#gene562753#73#diseaseC0242666","pred":"associated_with","subj":"10706858-11#30#35#gene5627","obj":"10706858-11#53#73#diseaseC0242666"}],"attributes":[{"subj":"10706858-11#30#35#gene5627","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"10706858-11#53#73#diseaseC0242666","pred":"source","obj":"DisGeNET5_gene_disease"}]},{"project":"NCBI-Disease-Train","denotations":[{"id":"T3509","span":{"begin":52,"end":69},"obj":"SpecificDisease"},{"id":"T3510","span":{"begin":97,"end":122},"obj":"SpecificDisease"},{"id":"T3511","span":{"begin":124,"end":144},"obj":"SpecificDisease"},{"id":"T3512","span":{"begin":177,"end":194},"obj":"SpecificDisease"},{"id":"T3513","span":{"begin":217,"end":241},"obj":"DiseaseClass"},{"id":"T3514","span":{"begin":533,"end":553},"obj":"SpecificDisease"},{"id":"T3515","span":{"begin":560,"end":577},"obj":"SpecificDisease"},{"id":"T3516","span":{"begin":855,"end":872},"obj":"SpecificDisease"},{"id":"T3517","span":{"begin":942,"end":959},"obj":"SpecificDisease"},{"id":"T3518","span":{"begin":990,"end":1000},"obj":"SpecificDisease"},{"id":"T3519","span":{"begin":1098,"end":1118},"obj":"SpecificDisease"},{"id":"T3520","span":{"begin":1165,"end":1171},"obj":"SpecificDisease"},{"id":"T3521","span":{"begin":1213,"end":1223},"obj":"SpecificDisease"},{"id":"T3522","span":{"begin":1316,"end":1341},"obj":"SpecificDisease"},{"id":"T3523","span":{"begin":1528,"end":1546},"obj":"SpecificDisease"},{"id":"T3524","span":{"begin":1551,"end":1571},"obj":"SpecificDisease"},{"id":"T3525","span":{"begin":1597,"end":1607},"obj":"SpecificDisease"}],"attributes":[{"id":"A3509","pred":"database_id","subj":"T3509","obj":"D020246"},{"id":"A3510","pred":"database_id","subj":"T3510","obj":"D018455"},{"id":"A3511","pred":"database_id","subj":"T3511","obj":"D018455"},{"id":"A3512","pred":"database_id","subj":"T3512","obj":"D020246"},{"id":"A3513","pred":"database_id","subj":"T3513","obj":"D019851"},{"id":"A3514","pred":"database_id","subj":"T3514","obj":"D018455"},{"id":"A3515","pred":"database_id","subj":"T3515","obj":"OMIM:612336"},{"id":"A3516","pred":"database_id","subj":"T3516","obj":"OMIM:612336"},{"id":"A3517","pred":"database_id","subj":"T3517","obj":"OMIM:612336"},{"id":"A3518","pred":"database_id","subj":"T3518","obj":"D013927"},{"id":"A3519","pred":"database_id","subj":"T3519","obj":"D019851"},{"id":"A3520","pred":"database_id","subj":"T3520","obj":"D014947"},{"id":"A3521","pred":"database_id","subj":"T3521","obj":"D013927"},{"id":"A3522","pred":"database_id","subj":"T3522","obj":"OMIM:612336"},{"id":"A3523","pred":"database_id","subj":"T3523","obj":"OMIM:612336"},{"id":"A3524","pred":"database_id","subj":"T3524","obj":"D018455"},{"id":"A3525","pred":"database_id","subj":"T3525","obj":"D013927"},{"subj":"T3509","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3510","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3511","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3512","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3513","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3514","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3515","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3516","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3517","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3518","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3519","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3520","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3521","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3522","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3523","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3524","pred":"source","obj":"NCBI-Disease-Train"},{"subj":"T3525","pred":"source","obj":"NCBI-Disease-Train"}]},{"project":"NCBI-Disease-Corpus-All","denotations":[{"id":"T3509","span":{"begin":52,"end":69},"obj":"SpecificDisease"},{"id":"T3510","span":{"begin":97,"end":122},"obj":"SpecificDisease"},{"id":"T3511","span":{"begin":124,"end":144},"obj":"SpecificDisease"},{"id":"T3512","span":{"begin":177,"end":194},"obj":"SpecificDisease"},{"id":"T3513","span":{"begin":217,"end":241},"obj":"DiseaseClass"},{"id":"T3514","span":{"begin":533,"end":553},"obj":"SpecificDisease"},{"id":"T3515","span":{"begin":560,"end":577},"obj":"SpecificDisease"},{"id":"T3516","span":{"begin":855,"end":872},"obj":"SpecificDisease"},{"id":"T3517","span":{"begin":942,"end":959},"obj":"SpecificDisease"},{"id":"T3518","span":{"begin":990,"end":1000},"obj":"SpecificDisease"},{"id":"T3519","span":{"begin":1098,"end":1118},"obj":"SpecificDisease"},{"id":"T3520","span":{"begin":1165,"end":1171},"obj":"SpecificDisease"},{"id":"T3521","span":{"begin":1213,"end":1223},"obj":"SpecificDisease"},{"id":"T3522","span":{"begin":1316,"end":1341},"obj":"SpecificDisease"},{"id":"T3523","span":{"begin":1528,"end":1546},"obj":"SpecificDisease"},{"id":"T3524","span":{"begin":1551,"end":1571},"obj":"SpecificDisease"},{"id":"T3525","span":{"begin":1597,"end":1607},"obj":"SpecificDisease"}],"attributes":[{"id":"A3509","pred":"database_id","subj":"T3509","obj":"D020246"},{"id":"A3510","pred":"database_id","subj":"T3510","obj":"D018455"},{"id":"A3511","pred":"database_id","subj":"T3511","obj":"D018455"},{"id":"A3512","pred":"database_id","subj":"T3512","obj":"D020246"},{"id":"A3513","pred":"database_id","subj":"T3513","obj":"D019851"},{"id":"A3514","pred":"database_id","subj":"T3514","obj":"D018455"},{"id":"A3515","pred":"database_id","subj":"T3515","obj":"OMIM:612336"},{"id":"A3516","pred":"database_id","subj":"T3516","obj":"OMIM:612336"},{"id":"A3517","pred":"database_id","subj":"T3517","obj":"OMIM:612336"},{"id":"A3518","pred":"database_id","subj":"T3518","obj":"D013927"},{"id":"A3519","pred":"database_id","subj":"T3519","obj":"D019851"},{"id":"A3520","pred":"database_id","subj":"T3520","obj":"D014947"},{"id":"A3521","pred":"database_id","subj":"T3521","obj":"D013927"},{"id":"A3522","pred":"database_id","subj":"T3522","obj":"OMIM:612336"},{"id":"A3523","pred":"database_id","subj":"T3523","obj":"OMIM:612336"},{"id":"A3524","pred":"database_id","subj":"T3524","obj":"D018455"},{"id":"A3525","pred":"database_id","subj":"T3525","obj":"D013927"},{"subj":"T3509","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3510","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3511","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3512","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3513","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3514","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3515","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3516","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3517","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3518","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3519","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3520","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3521","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3522","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3523","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3524","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T3525","pred":"source","obj":"NCBI-Disease-Corpus-All"}]},{"project":"NCBI-Disease-Corpus-2stage-All","denotations":[{"id":"T1","span":{"begin":52,"end":69},"obj":"SpecificDisease"},{"id":"T3","span":{"begin":124,"end":144},"obj":"SpecificDisease"},{"id":"T4","span":{"begin":177,"end":194},"obj":"SpecificDisease"},{"id":"T5","span":{"begin":533,"end":553},"obj":"SpecificDisease"},{"id":"T6","span":{"begin":990,"end":1000},"obj":"SpecificDisease"},{"id":"T7","span":{"begin":1213,"end":1223},"obj":"SpecificDisease"},{"id":"T8","span":{"begin":1551,"end":1571},"obj":"SpecificDisease"},{"id":"T9","span":{"begin":1597,"end":1607},"obj":"SpecificDisease"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"}]},{"project":"NCBI-Disease-Corpus-rezarta-All","denotations":[{"id":"T1","span":{"begin":52,"end":69},"obj":"SpecificDisease"},{"id":"T3","span":{"begin":124,"end":144},"obj":"DiseaseClass"},{"id":"T4","span":{"begin":177,"end":194},"obj":"SpecificDisease"},{"id":"T5","span":{"begin":217,"end":241},"obj":"DiseaseClass"},{"id":"T6","span":{"begin":533,"end":553},"obj":"DiseaseClass"},{"id":"T7","span":{"begin":990,"end":1000},"obj":"SpecificDisease"},{"id":"T8","span":{"begin":1098,"end":1118},"obj":"DiseaseClass"},{"id":"T9","span":{"begin":1213,"end":1223},"obj":"SpecificDisease"},{"id":"T10","span":{"begin":1373,"end":1389},"obj":"SpecificDisease"},{"id":"T11","span":{"begin":1551,"end":1571},"obj":"DiseaseClass"},{"id":"T12","span":{"begin":1597,"end":1607},"obj":"SpecificDisease"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-rezarta-All"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-rezarta-All"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-rezarta-All"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-rezarta-All"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-rezarta-All"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Corpus-rezarta-All"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Corpus-rezarta-All"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Corpus-rezarta-All"},{"subj":"T10","pred":"source","obj":"NCBI-Disease-Corpus-rezarta-All"},{"subj":"T11","pred":"source","obj":"NCBI-Disease-Corpus-rezarta-All"},{"subj":"T12","pred":"source","obj":"NCBI-Disease-Corpus-rezarta-All"}]},{"project":"NCBI-Disease-Corpus-4oGuideline-All","denotations":[{"id":"T1","span":{"begin":52,"end":69},"obj":"SpecificDisease"},{"id":"T3","span":{"begin":124,"end":144},"obj":"SpecificDisease"},{"id":"T4","span":{"begin":177,"end":194},"obj":"SpecificDisease"},{"id":"T5","span":{"begin":533,"end":553},"obj":"SpecificDisease"},{"id":"T6","span":{"begin":990,"end":1000},"obj":"SpecificDisease"},{"id":"T7","span":{"begin":1213,"end":1223},"obj":"SpecificDisease"},{"id":"T8","span":{"begin":1551,"end":1571},"obj":"SpecificDisease"},{"id":"T9","span":{"begin":1597,"end":1607},"obj":"SpecificDisease"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"}]},{"project":"NCBI-Disease-Corpus-Simple-All","denotations":[{"id":"T1","span":{"begin":52,"end":69},"obj":"SpecificDisease"},{"id":"T3","span":{"begin":124,"end":144},"obj":"SpecificDisease"},{"id":"T4","span":{"begin":177,"end":194},"obj":"SpecificDisease"},{"id":"T5","span":{"begin":217,"end":241},"obj":"DiseaseClass"},{"id":"T6","span":{"begin":533,"end":553},"obj":"SpecificDisease"},{"id":"T7","span":{"begin":990,"end":1000},"obj":"SpecificDisease"},{"id":"T8","span":{"begin":1098,"end":1118},"obj":"DiseaseClass"},{"id":"T9","span":{"begin":1213,"end":1223},"obj":"SpecificDisease"},{"id":"T10","span":{"begin":1373,"end":1389},"obj":"SpecificDisease"},{"id":"T11","span":{"begin":1551,"end":1571},"obj":"SpecificDisease"},{"id":"T12","span":{"begin":1597,"end":1607},"obj":"SpecificDisease"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T10","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T11","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T12","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"NCBIDiseaseCorpus","color":"#93b2ec","default":true},{"id":"PubmedHPO","color":"#ccec93"},{"id":"DisGeNET","color":"#ec93e6"},{"id":"DisGeNET5_gene_disease","color":"#93ecd8"},{"id":"NCBI-Disease-Train","color":"#ecbe93"},{"id":"NCBI-Disease-Corpus-All","color":"#a493ec"},{"id":"NCBI-Disease-Corpus-2stage-All","color":"#9cec93"},{"id":"NCBI-Disease-Corpus-rezarta-All","color":"#ec93b6"},{"id":"NCBI-Disease-Corpus-4oGuideline-All","color":"#93d0ec"},{"id":"NCBI-Disease-Corpus-Simple-All","color":"#eaec93"}]}]}}