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PubMed:10704530 JSONTXT

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CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 598-604 Cell denotes Type I http://purl.obolibrary.org/obo/CL:0004120|http://purl.obolibrary.org/obo/CL:0004138

Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 67-78 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T2 568-579 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T3 741-752 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T4 782-790 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis(x)
T5 782-790 https://glytoucan.org/Structures/Glycans/G01187XC denotes Lewis(x)
T6 795-803 https://glytoucan.org/Structures/Glycans/G00047MO denotes Lewis(a)
T7 795-803 https://glytoucan.org/Structures/Glycans/G39023AU denotes Lewis(a)
T8 1136-1155 https://glytoucan.org/Structures/Glycans/G00054MO denotes sialylated Lewis(x)
T9 1164-1183 https://glytoucan.org/Structures/Glycans/G00053MO denotes sialylated Lewis(a)
T10 1164-1183 https://glytoucan.org/Structures/Glycans/G81971FM denotes sialylated Lewis(a)

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 67-78 Glycan_Motif denotes sialic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY
T2 568-579 Glycan_Motif denotes sialic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY
T3 741-752 Glycan_Motif denotes sialic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY
T4 782-790 Glycan_Motif denotes Lewis(x) https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO
T6 795-803 Glycan_Motif denotes Lewis(a) https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G39023AU|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00047MO
T8 1136-1155 Glycan_Motif denotes sialylated Lewis(x) https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00054MO
T9 1147-1155 Glycan_Motif denotes Lewis(x) https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO
T11 1164-1183 Glycan_Motif denotes sialylated Lewis(a) https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81971FM|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00053MO
T13 1175-1183 Glycan_Motif denotes Lewis(a) https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G39023AU|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00047MO

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-104 Sentence denotes A novel viral alpha2,3-sialyltransferase (v-ST3Gal I): transfer of sialic acid to fucosylated acceptors.
TextSentencer_T2 105-244 Sentence denotes The substrate specificity of an alpha2,3-sialyltransferase (v-ST3Gal I) obtained from myxoma virus infected RK13 cells has been determined.
TextSentencer_T3 245-388 Sentence denotes Like mammalian sialyltransferase enzymes, the viral enzyme contains the characteristic L- and S-sialyl motif sequences in its catalytic domain.
TextSentencer_T4 389-695 Sentence denotes Analysis of the deduced amino acid sequences of cloned sialyltransferases suggests that v-ST3Gal I is closely related to mammalian ST3Gal IV. v-ST3Gal I catalyzes the transfer of sialic acid from CMP-NeuAc to Type I (Galbeta1-3GlcNAcbeta) II (Galbeta1-4GlcNAcbeta) and III (Galbeta1-3GalNAcbeta) acceptors.
TextSentencer_T5 696-804 Sentence denotes In addition, the viral enzyme also transfers sialic acid to the fucosylated acceptors Lewis(x) and Lewis(a).
TextSentencer_T6 805-955 Sentence denotes This substrate specificity is unlike any sialyltransferases described to date, though it is most comparable with those of mammalian ST3Gal IV enzymes.
TextSentencer_T7 956-1109 Sentence denotes The products from reactions with fucosylated acceptors were characterized by capillary zone electrophoresis, (1)H-NMR spectroscopy and mass spectrometry.
TextSentencer_T8 1110-1198 Sentence denotes They were shown to be 2,3-sialylated Lewis(x) and 2,3-sialylated Lewis(a), respectively.
T1 0-104 Sentence denotes A novel viral alpha2,3-sialyltransferase (v-ST3Gal I): transfer of sialic acid to fucosylated acceptors.
T2 105-244 Sentence denotes The substrate specificity of an alpha2,3-sialyltransferase (v-ST3Gal I) obtained from myxoma virus infected RK13 cells has been determined.
T3 245-388 Sentence denotes Like mammalian sialyltransferase enzymes, the viral enzyme contains the characteristic L- and S-sialyl motif sequences in its catalytic domain.
T4 389-695 Sentence denotes Analysis of the deduced amino acid sequences of cloned sialyltransferases suggests that v-ST3Gal I is closely related to mammalian ST3Gal IV. v-ST3Gal I catalyzes the transfer of sialic acid from CMP-NeuAc to Type I (Galbeta1-3GlcNAcbeta) II (Galbeta1-4GlcNAcbeta) and III (Galbeta1-3GalNAcbeta) acceptors.
T5 696-804 Sentence denotes In addition, the viral enzyme also transfers sialic acid to the fucosylated acceptors Lewis(x) and Lewis(a).
T6 805-955 Sentence denotes This substrate specificity is unlike any sialyltransferases described to date, though it is most comparable with those of mammalian ST3Gal IV enzymes.
T7 956-1109 Sentence denotes The products from reactions with fucosylated acceptors were characterized by capillary zone electrophoresis, (1)H-NMR spectroscopy and mass spectrometry.
T8 1110-1198 Sentence denotes They were shown to be 2,3-sialylated Lewis(x) and 2,3-sialylated Lewis(a), respectively.
T1 0-104 Sentence denotes A novel viral alpha2,3-sialyltransferase (v-ST3Gal I): transfer of sialic acid to fucosylated acceptors.
T2 105-244 Sentence denotes The substrate specificity of an alpha2,3-sialyltransferase (v-ST3Gal I) obtained from myxoma virus infected RK13 cells has been determined.
T3 245-388 Sentence denotes Like mammalian sialyltransferase enzymes, the viral enzyme contains the characteristic L- and S-sialyl motif sequences in its catalytic domain.
T4 389-695 Sentence denotes Analysis of the deduced amino acid sequences of cloned sialyltransferases suggests that v-ST3Gal I is closely related to mammalian ST3Gal IV. v-ST3Gal I catalyzes the transfer of sialic acid from CMP-NeuAc to Type I (Galbeta1-3GlcNAcbeta) II (Galbeta1-4GlcNAcbeta) and III (Galbeta1-3GalNAcbeta) acceptors.
T5 696-804 Sentence denotes In addition, the viral enzyme also transfers sialic acid to the fucosylated acceptors Lewis(x) and Lewis(a).
T6 805-955 Sentence denotes This substrate specificity is unlike any sialyltransferases described to date, though it is most comparable with those of mammalian ST3Gal IV enzymes.
T7 956-1109 Sentence denotes The products from reactions with fucosylated acceptors were characterized by capillary zone electrophoresis, (1)H-NMR spectroscopy and mass spectrometry.
T8 1110-1198 Sentence denotes They were shown to be 2,3-sialylated Lewis(x) and 2,3-sialylated Lewis(a), respectively.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 67-78 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T2 568-579 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T3 741-752 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T4 782-790 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis(x)
T5 782-790 https://glytoucan.org/Structures/Glycans/G01187XC denotes Lewis(x)
T6 795-803 https://glytoucan.org/Structures/Glycans/G00047MO denotes Lewis(a)
T7 795-803 https://glytoucan.org/Structures/Glycans/G39023AU denotes Lewis(a)
T8 1136-1155 https://glytoucan.org/Structures/Glycans/G00054MO denotes sialylated Lewis(x)
T9 1147-1155 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis(x)
T10 1147-1155 https://glytoucan.org/Structures/Glycans/G01187XC denotes Lewis(x)
T11 1164-1183 https://glytoucan.org/Structures/Glycans/G00053MO denotes sialylated Lewis(a)
T12 1164-1183 https://glytoucan.org/Structures/Glycans/G81971FM denotes sialylated Lewis(a)
T13 1175-1183 https://glytoucan.org/Structures/Glycans/G00047MO denotes Lewis(a)
T14 1175-1183 https://glytoucan.org/Structures/Glycans/G39023AU denotes Lewis(a)

GlycoBiology-PACDB

Id Subject Object Predicate Lexical cue
_T1 191-203 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC651 denotes myxoma virus

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 218-223 FMAID:68646 denotes cells
_T2 218-223 FMAID:169002 denotes cells
_T3 413-423 FMAID:196728 denotes amino acid
_T4 413-423 FMAID:82739 denotes amino acid
_T5 1033-1042 FMAID:63194 denotes capillary
_T6 1033-1042 FMAID:167591 denotes capillary

uniprot-human

Id Subject Object Predicate Lexical cue
T1 44-52 http://www.uniprot.org/uniprot/Q11201 denotes ST3Gal I
T2 167-175 http://www.uniprot.org/uniprot/Q11201 denotes ST3Gal I
T3 479-487 http://www.uniprot.org/uniprot/Q11201 denotes ST3Gal I
T4 533-541 http://www.uniprot.org/uniprot/Q11201 denotes ST3Gal I
T5 520-529 http://www.uniprot.org/uniprot/Q11206 denotes ST3Gal IV
T6 937-946 http://www.uniprot.org/uniprot/Q11206 denotes ST3Gal IV
T7 585-588 http://www.uniprot.org/uniprot/P21941 denotes CMP

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 44-52 http://www.uniprot.org/uniprot/P54751 denotes ST3Gal I
T2 167-175 http://www.uniprot.org/uniprot/P54751 denotes ST3Gal I
T3 479-487 http://www.uniprot.org/uniprot/P54751 denotes ST3Gal I
T4 533-541 http://www.uniprot.org/uniprot/P54751 denotes ST3Gal I
T5 520-529 http://www.uniprot.org/uniprot/Q91Y74 denotes ST3Gal IV
T6 937-946 http://www.uniprot.org/uniprot/Q91Y74 denotes ST3Gal IV

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 191-203 http://purl.bioontology.org/ontology/NCBITAXON/10273 denotes myxoma virus
T2 198-203 http://purl.bioontology.org/ontology/NCBITAXON/184751 denotes virus
T3 218-223 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T4 413-433 http://purl.bioontology.org/ontology/STY/T087 denotes amino acid sequences
T5 499-506 http://purl.bioontology.org/ontology/NCBITAXON/353209 denotes related
T6 1033-1042 http://purl.bioontology.org/ontology/NCBITAXON/119095 denotes capillary
T7 1033-1042 http://purl.bioontology.org/ontology/NCBITAXON/241203 denotes capillary

GO-BP

Id Subject Object Predicate Lexical cue
T1 82-93 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylated
T2 760-771 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylated
T3 989-1000 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylated
T4 341-347 http://purl.obolibrary.org/obo/GO_0097503 denotes sialyl
T5 1136-1146 http://purl.obolibrary.org/obo/GO_0097503 denotes sialylated
T6 1164-1174 http://purl.obolibrary.org/obo/GO_0097503 denotes sialylated

GO-CC

Id Subject Object Predicate Lexical cue
T1 218-223 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 1033-1042 http://purl.obolibrary.org/obo/UBERON_0001982 denotes capillary

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 348-353 http://edamontology.org/topic_0158 denotes motif
T2 354-363 http://edamontology.org/topic_3168 denotes sequences
T3 354-363 http://edamontology.org/topic_0080 denotes sequences
T4 413-423 http://edamontology.org/topic_0154 denotes amino acid
T5 424-433 http://edamontology.org/topic_3168 denotes sequences
T6 424-433 http://edamontology.org/topic_0080 denotes sequences
T7 1070-1073 http://edamontology.org/topic_0593 denotes NMR
T8 1070-1086 http://edamontology.org/topic_0593 denotes NMR spectroscopy
T9 1074-1086 http://edamontology.org/topic_0593 denotes spectroscopy
T10 1091-1108 http://edamontology.org/topic_3520 denotes mass spectrometry
T11 1091-1108 http://edamontology.org/topic_0134 denotes mass spectrometry

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 354-363 http://edamontology.org/data_2044 denotes sequences
T2 354-363 http://edamontology.org/operation_3218 denotes sequences
T3 389-397 http://edamontology.org/operation_2945 denotes Analysis
T4 424-433 http://edamontology.org/operation_3218 denotes sequences
T5 424-433 http://edamontology.org/data_2044 denotes sequences
T6 878-882 http://edamontology.org/data_2156 denotes date
T7 1091-1108 http://edamontology.org/data_3147 denotes mass spectrometry
T8 1091-1108 http://edamontology.org/data_2536 denotes mass spectrometry

GlycoBiology-Motifs

Id Subject Object Predicate Lexical cue
T1 782-787 http://rdf.glycoinfo.org/glycan/G00047MO denotes Lewis
T2 795-800 http://rdf.glycoinfo.org/glycan/G00047MO denotes Lewis
T3 1147-1152 http://rdf.glycoinfo.org/glycan/G00047MO denotes Lewis
T4 1175-1180 http://rdf.glycoinfo.org/glycan/G00047MO denotes Lewis
T5 782-789 http://rdf.glycoinfo.org/glycan/G00051MO denotes Lewis(x
T6 1147-1154 http://rdf.glycoinfo.org/glycan/G00051MO denotes Lewis(x

GlycoBiology-Epitope

Id Subject Object Predicate Lexical cue
PD-GlycoEpitope-B_T1 1164-1182 http://www.glycoepitope.jp/epitopes/EP0008 denotes sialylated Lewis(a
PD-GlycoEpitope-B_T2 795-802 http://www.glycoepitope.jp/epitopes/EP0007 denotes Lewis(a
PD-GlycoEpitope-B_T3 1175-1182 http://www.glycoepitope.jp/epitopes/EP0007 denotes Lewis(a
PD-GlycoEpitope-B_T4 1136-1154 http://www.glycoepitope.jp/epitopes/EP0012 denotes sialylated Lewis(x
PD-GlycoEpitope-B_T5 782-789 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis(x
PD-GlycoEpitope-B_T6 1147-1154 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis(x

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 1033-1042 http://purl.obolibrary.org/obo/UBERON_0001982 denotes capillary

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 589-594 Glycan denotes NeuAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR
T2 782-790 Glycan denotes Lewis(x) https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO
T3 795-803 Glycan denotes Lewis(a) https://api.glycosmos.org/wurcs2image/latest/png/binary/G39023AU
T4 1147-1155 Glycan denotes Lewis(x) https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO
T5 1175-1183 Glycan denotes Lewis(a) https://api.glycosmos.org/wurcs2image/latest/png/binary/G39023AU

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 191-197 Disease denotes myxoma http://purl.obolibrary.org/obo/MONDO_0044784

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 589-594 Glycan denotes NeuAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 598-604 Cell denotes Type I http://purl.obolibrary.org/obo/CL:0004120|http://purl.obolibrary.org/obo/CL:0004138

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1033-1042 Body_part denotes capillary http://purl.obolibrary.org/obo/UBERON_0001982

GlyCosmos15-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 191-197 Disease denotes myxoma MONDO:0044784

GlyCosmos15-Taxon

Id Subject Object Predicate Lexical cue db_id
T1 191-203 Organism denotes myxoma virus 10273
T2 250-259 Organism denotes mammalian 40674
T3 510-519 Organism denotes mammalian 40674
T4 927-936 Organism denotes mammalian 40674

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-104 Sentence denotes A novel viral alpha2,3-sialyltransferase (v-ST3Gal I): transfer of sialic acid to fucosylated acceptors.
T2 105-244 Sentence denotes The substrate specificity of an alpha2,3-sialyltransferase (v-ST3Gal I) obtained from myxoma virus infected RK13 cells has been determined.
T3 245-388 Sentence denotes Like mammalian sialyltransferase enzymes, the viral enzyme contains the characteristic L- and S-sialyl motif sequences in its catalytic domain.
T4 389-695 Sentence denotes Analysis of the deduced amino acid sequences of cloned sialyltransferases suggests that v-ST3Gal I is closely related to mammalian ST3Gal IV. v-ST3Gal I catalyzes the transfer of sialic acid from CMP-NeuAc to Type I (Galbeta1-3GlcNAcbeta) II (Galbeta1-4GlcNAcbeta) and III (Galbeta1-3GalNAcbeta) acceptors.
T5 696-804 Sentence denotes In addition, the viral enzyme also transfers sialic acid to the fucosylated acceptors Lewis(x) and Lewis(a).
T6 805-955 Sentence denotes This substrate specificity is unlike any sialyltransferases described to date, though it is most comparable with those of mammalian ST3Gal IV enzymes.
T7 956-1109 Sentence denotes The products from reactions with fucosylated acceptors were characterized by capillary zone electrophoresis, (1)H-NMR spectroscopy and mass spectrometry.
T8 1110-1198 Sentence denotes They were shown to be 2,3-sialylated Lewis(x) and 2,3-sialylated Lewis(a), respectively.

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 1033-1042 Body_part denotes capillary FMA:63194

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 191-203 OrganismTaxon denotes myxoma virus 10273

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1033-1042 Body_part denotes capillary http://purl.obolibrary.org/obo/UBERON_0001982