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PubMed:10542282 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
T1 0-58 Sentence denotes Accumulation of pre-apocytochrome f in a Synechocystis sp.
T2 59-111 Sentence denotes PCC 6803 mutant impaired in cytochrome c maturation.
T3 112-210 Sentence denotes Cytochrome c maturation involves heme transport and covalent attachment of heme to the apoprotein.
T4 211-438 Sentence denotes The 5' end of the ccsB gene, which is involved in the maturation process and resembles the ccs1 gene from Chlamydomonas reinhardtii, was replaced by a chloramphenicol resistance cartridge in the cyanobacterium Synechocystis sp.
T5 439-448 Sentence denotes PCC 6803.
T6 449-554 Sentence denotes The resulting Delta(M1-A24) mutant lacking the first 24 ccsB codons grew only under anaerobic conditions.
T7 555-717 Sentence denotes The mutant retained about 20% of the wild-type amount of processed cytochrome f with heme attached, apparently assembled in a functional cytochrome b(6)f complex.
T8 718-804 Sentence denotes Moreover, the mutant accumulated unprocessed apocytochrome f in its membrane fraction.
T9 805-895 Sentence denotes A pseudorevertant was isolated that regained the ability to grow under aerobic conditions.
T10 896-1151 Sentence denotes The locus of the second-site mutation was mapped to ccsB, and the mutation resulted in the formation of a new potential start codon in the intergenic region, between the chloramphenicol resistance marker and ccsB, in frame with the remaining part of ccsB.
T11 1152-1265 Sentence denotes In this pseudorevertant the amount of holocyt f increased, whereas that of unprocessed apocytochrome f decreased.
T12 1266-1384 Sentence denotes We suggest that the original deletion mutant Delta(M1-A24) expresses an N-terminally truncated version of the protein.
T13 1385-1616 Sentence denotes The stable accumulation of unprocessed apocytochrome f in membranes of the Delta(M1-A24) mutant may be explained by its association with truncated and only partially functional CcsB protein resulting in protection from degradation.
T14 1617-1688 Sentence denotes Our attempt to delete the first 244 codons of ccsB in Synechocystis sp.
T15 1689-1799 Sentence denotes PCC 6803 was not successful, suggesting that this would lead to a lack of functional cytochrome b(6)f complex.
T16 1800-1940 Sentence denotes The results suggest that the CcsB protein is an apocytochrome chaperone, which together with CcsA may constitute part of cytochrome c lyase.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 406-420 http://purl.obolibrary.org/obo/MAT_0000192 denotes cyanobacterium

CyanoBase

Id Subject Object Predicate Lexical cue
T1 229-233 protein denotes ccsB
T2 505-509 protein denotes ccsB
T3 622-634 protein denotes cytochrome f
T4 763-778 protein denotes apocytochrome f
T5 948-952 protein denotes ccsB
T6 1104-1108 protein denotes ccsB
T7 1146-1150 protein denotes ccsB
T8 1424-1439 protein denotes apocytochrome f
T9 1562-1566 protein denotes CcsB
T10 1663-1667 protein denotes ccsB
T11 1829-1833 protein denotes CcsB
T12 1893-1897 protein denotes CcsA

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 59-62 Disease denotes PCC http://purl.obolibrary.org/obo/MONDO_0004974|http://purl.obolibrary.org/obo/MONDO_0022673
T3 362-388 Disease denotes chloramphenicol resistance http://purl.obolibrary.org/obo/MONDO_0010784
T4 439-442 Disease denotes PCC http://purl.obolibrary.org/obo/MONDO_0004974|http://purl.obolibrary.org/obo/MONDO_0022673
T6 1066-1092 Disease denotes chloramphenicol resistance http://purl.obolibrary.org/obo/MONDO_0010784
T7 1689-1692 Disease denotes PCC http://purl.obolibrary.org/obo/MONDO_0004974|http://purl.obolibrary.org/obo/MONDO_0022673

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 406-420 Body_part denotes cyanobacterium http://purl.obolibrary.org/obo/MAT_0000192

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 41-54 OrganismTaxon denotes Synechocystis 1142
T2 317-342 OrganismTaxon denotes Chlamydomonas reinhardtii 3055
T3 406-420 OrganismTaxon denotes cyanobacterium 102234
T4 421-434 OrganismTaxon denotes Synechocystis 1142
T5 1671-1684 OrganismTaxon denotes Synechocystis 1142

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 786-794 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T4 1443-1452 Body_part denotes membranes http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 463-468 Cell denotes Delta http://purl.obolibrary.org/obo/CL:0004124
T2 1311-1316 Cell denotes Delta http://purl.obolibrary.org/obo/CL:0004124
T3 1460-1465 Cell denotes Delta http://purl.obolibrary.org/obo/CL:0004124