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PubMed:10460832 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 298-310 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acids

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 298-310 Glycan_Motif denotes sialic acids https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 298-310 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acids

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 65-69 FMAID:198663 denotes gene
_T2 81-94 FMAID:167171 denotes B-lymphocytes
_T3 81-94 FMAID:167174 denotes B-lymphocytes
_T4 81-94 FMAID:167173 denotes B-lymphocytes
_T5 81-94 FMAID:62870 denotes B-lymphocytes
_T6 81-94 FMAID:167176 denotes B-lymphocytes
_T7 81-94 FMAID:62869 denotes B-lymphocytes
_T8 83-94 FMAID:167163 denotes lymphocytes
_T9 83-94 FMAID:62863 denotes lymphocytes
_T10 203-207 FMAID:198663 denotes gene
_T11 352-365 FMAID:167256 denotes glycoproteins
_T12 352-365 FMAID:62925 denotes glycoproteins
_T13 468-474 FMAID:256050 denotes tissue
_T14 637-650 FMAID:167174 denotes B-lymphocytes
_T15 637-650 FMAID:62869 denotes B-lymphocytes
_T16 637-650 FMAID:167173 denotes B-lymphocytes
_T17 637-650 FMAID:167176 denotes B-lymphocytes
_T18 637-650 FMAID:167171 denotes B-lymphocytes
_T19 637-650 FMAID:62870 denotes B-lymphocytes
_T20 639-650 FMAID:62863 denotes lymphocytes
_T21 639-650 FMAID:167163 denotes lymphocytes
_T22 745-750 FMAID:68646 denotes cells
_T23 745-750 FMAID:169002 denotes cells
_T24 962-976 FMAID:83030 denotes lymphoblastoid
_T25 962-976 FMAID:197290 denotes lymphoblastoid
_T26 962-981 FMAID:198000 denotes lymphoblastoid cell
_T27 962-981 FMAID:84065 denotes lymphoblastoid cell
_T28 1313-1321 FMAID:104341 denotes flanking
_T29 1441-1445 FMAID:198073 denotes Exon
_T30 1441-1445 FMAID:84120 denotes Exon
_T31 1528-1535 FMAID:256632 denotes segment
_T32 1528-1535 FMAID:256633 denotes segment
_T33 1528-1535 FMAID:256631 denotes segment
_T34 1528-1535 FMAID:256630 denotes segment
_T35 1528-1535 FMAID:256628 denotes segment
_T36 1528-1535 FMAID:256626 denotes segment
_T37 1528-1535 FMAID:256627 denotes segment
_T38 1528-1535 FMAID:11367 denotes segment
_T39 1528-1535 FMAID:99729 denotes segment
_T40 1528-1535 FMAID:256625 denotes segment
_T41 1528-1535 FMAID:256624 denotes segment
_T42 1528-1535 FMAID:256629 denotes segment
_T43 1723-1728 FMAID:169002 denotes cells
_T44 1723-1728 FMAID:68646 denotes cells
_T45 1963-1971 FMAID:200932 denotes and cell
_T46 1963-1971 FMAID:86471 denotes and cell
_T47 2016-2029 FMAID:62869 denotes B lymphocytes
_T48 2016-2029 FMAID:167171 denotes B lymphocytes
_T49 2016-2029 FMAID:167173 denotes B lymphocytes
_T50 2016-2029 FMAID:62870 denotes B lymphocytes
_T51 2016-2029 FMAID:167176 denotes B lymphocytes
_T52 2016-2029 FMAID:167174 denotes B lymphocytes
_T53 2018-2029 FMAID:62863 denotes lymphocytes
_T54 2018-2029 FMAID:167163 denotes lymphocytes
_T55 2055-2065 FMAID:172288 denotes P2 segment
_T56 2055-2065 FMAID:172296 denotes P2 segment
_T57 2055-2065 FMAID:166657 denotes P2 segment
_T58 2055-2065 FMAID:71180 denotes P2 segment
_T59 2055-2065 FMAID:62422 denotes P2 segment
_T60 2055-2065 FMAID:71188 denotes P2 segment
_T61 2058-2065 FMAID:256633 denotes segment
_T62 2058-2065 FMAID:99729 denotes segment
_T63 2058-2065 FMAID:11367 denotes segment
_T64 2058-2065 FMAID:256632 denotes segment
_T65 2058-2065 FMAID:256631 denotes segment
_T66 2058-2065 FMAID:256630 denotes segment
_T67 2058-2065 FMAID:256629 denotes segment
_T68 2058-2065 FMAID:256626 denotes segment
_T69 2058-2065 FMAID:256627 denotes segment
_T70 2058-2065 FMAID:256625 denotes segment
_T71 2058-2065 FMAID:256624 denotes segment
_T72 2058-2065 FMAID:256628 denotes segment
_T73 2100-2108 FMAID:104341 denotes flanking
_T74 2152-2156 FMAID:84120 denotes Exon
_T75 2152-2156 FMAID:198073 denotes Exon

uniprot-human

Id Subject Object Predicate Lexical cue
T1 71-76 http://www.uniprot.org/uniprot/P15907 denotes SIAT1
T2 209-214 http://www.uniprot.org/uniprot/P15907 denotes SIAT1
T3 385-390 http://www.uniprot.org/uniprot/P15907 denotes SIAT1
T4 224-232 http://www.uniprot.org/uniprot/P15907 denotes ST6Gal I
T5 685-687 http://www.uniprot.org/uniprot/P04554 denotes P2
T6 827-829 http://www.uniprot.org/uniprot/P04554 denotes P2
T7 1255-1257 http://www.uniprot.org/uniprot/P04554 denotes P2
T8 1699-1701 http://www.uniprot.org/uniprot/P04554 denotes P2
T9 2055-2057 http://www.uniprot.org/uniprot/P04554 denotes P2
T10 797-800 http://www.uniprot.org/uniprot/P04040 denotes CAT
T11 1001-1004 http://www.uniprot.org/uniprot/P04040 denotes CAT
T12 1681-1684 http://www.uniprot.org/uniprot/P04040 denotes CAT
T13 1748-1751 http://www.uniprot.org/uniprot/P04040 denotes CAT
T14 797-800 http://www.uniprot.org/uniprot/Q6IB77 denotes CAT
T15 1001-1004 http://www.uniprot.org/uniprot/Q6IB77 denotes CAT
T16 1681-1684 http://www.uniprot.org/uniprot/Q6IB77 denotes CAT
T17 1748-1751 http://www.uniprot.org/uniprot/Q6IB77 denotes CAT
T18 797-800 http://www.uniprot.org/uniprot/P43155 denotes CAT
T19 1001-1004 http://www.uniprot.org/uniprot/P43155 denotes CAT
T20 1681-1684 http://www.uniprot.org/uniprot/P43155 denotes CAT
T21 1748-1751 http://www.uniprot.org/uniprot/P43155 denotes CAT

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 224-232 http://www.uniprot.org/uniprot/Q64685 denotes ST6Gal I
T2 685-687 http://www.uniprot.org/uniprot/Q9R0C0 denotes P2
T3 827-829 http://www.uniprot.org/uniprot/Q9R0C0 denotes P2
T4 1255-1257 http://www.uniprot.org/uniprot/Q9R0C0 denotes P2
T5 1699-1701 http://www.uniprot.org/uniprot/Q9R0C0 denotes P2
T6 2055-2057 http://www.uniprot.org/uniprot/Q9R0C0 denotes P2
T7 797-800 http://www.uniprot.org/uniprot/P47934 denotes CAT
T8 1001-1004 http://www.uniprot.org/uniprot/P47934 denotes CAT
T9 1681-1684 http://www.uniprot.org/uniprot/P47934 denotes CAT
T10 1748-1751 http://www.uniprot.org/uniprot/P47934 denotes CAT
T11 869-873 http://www.uniprot.org/uniprot/Q64277 denotes bp 3
T12 1192-1195 http://www.uniprot.org/uniprot/Q62225 denotes cis

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 21-25 http://purl.bioontology.org/ontology/NCBITAXON/3554 denotes beta
T2 21-25 http://purl.bioontology.org/ontology/NCBITAXON/158455 denotes beta
T3 468-474 http://purl.bioontology.org/ontology/STY/T024 denotes tissue
T4 502-515 http://purl.bioontology.org/ontology/NCBITAXON/1113441 denotes heterogeneity
T5 502-515 http://purl.bioontology.org/ontology/NCBITAXON/691256 denotes heterogeneity
T6 745-750 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T7 1192-1195 http://purl.bioontology.org/ontology/NCBITAXON/245896 denotes cis
T8 1723-1728 http://purl.bioontology.org/ontology/STY/T025 denotes cells

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-193 Sentence denotes Transcription of the beta-galactoside alpha2,6-sialyltransferase gene (SIAT1) in B-lymphocytes: cell type-specific expression correlates with presence of the divergent 5'-untranslated sequence.
TextSentencer_T2 194-366 Sentence denotes A single gene, SIAT1, encodes ST6Gal I, the sialyltransferase that mediates transfer of alpha2,6-linked sialic acids to Galbeta1, 4GlcNAc termini of N-linked glycoproteins.
TextSentencer_T3 367-491 Sentence denotes In vivo, multiple SIAT1 mRNA forms, differing only in the 5'-untranslated region, are expressed in a tissue-specific manner.
TextSentencer_T4 492-626 Sentence denotes This mRNA heterogeneity has been attributed, at least in part, to transcription from a number of physically distinct promoter regions.
TextSentencer_T5 627-751 Sentence denotes In mature B-lymphocytes, SIAT1 transcription initiates at P2, a regulatory region known to function only in B-lineage cells.
TextSentencer_T6 752-987 Sentence denotes Bacterial chloramphenicol acetyltransferase (CAT) under the control of the P2 region encompassing 415 bp 5'- and 125 bp 3' of the transcriptional initiation site is efficiently expressed in Louckes, a mature B-lymphoblastoid cell line.
TextSentencer_T7 988-1147 Sentence denotes In contrast, CAT expression in Reh, a T-null/B-null precursor line, and in HepG2, a hepatoma line, are 14-fold and >25-fold less than in Louckes, respectively.
TextSentencer_T8 1148-1290 Sentence denotes The data is consistent with the presence of cis -acting regulatory elements residing both 5' and 3' of the P2 transcriptional initiation site.
TextSentencer_T9 1291-1440 Sentence denotes At least 370 bp of 5'-flanking sequence, coinciding with the inclusion of AP2 and NF-kappaB sites, is necessary for high level expression in Louckes.
TextSentencer_T10 1441-1525 Sentence denotes Exon sequences 3' of the transcription start site are also important for expression.
TextSentencer_T11 1526-1680 Sentence denotes A segment from(+)32 to(+)125 (position(+)1 is transcription start site) is capable of exerting promoter-like activity in Louckes, but not in Reh or HepG2.
TextSentencer_T12 1681-1729 Sentence denotes CAT expression by P2 is negligible in Reh cells.
TextSentencer_T13 1730-1804 Sentence denotes However, enhanced CAT activity is not accompanied by elevated mRNA levels.
TextSentencer_T14 1805-1916 Sentence denotes This observation is consistent with the relief of translational restraints imposed by the(+)32 to(+)125 region.
TextSentencer_T15 1917-2159 Sentence denotes Together, the data demonstrate that efficient and cell-specific transcription regulation in mature B lymphocytes is contained in a 495 bp P2 segment that is comprised of 370 bp of 5'-flanking region and 125 bp of transcribed region of Exon X.
T1 0-193 Sentence denotes Transcription of the beta-galactoside alpha2,6-sialyltransferase gene (SIAT1) in B-lymphocytes: cell type-specific expression correlates with presence of the divergent 5'-untranslated sequence.
T2 194-366 Sentence denotes A single gene, SIAT1, encodes ST6Gal I, the sialyltransferase that mediates transfer of alpha2,6-linked sialic acids to Galbeta1, 4GlcNAc termini of N-linked glycoproteins.
T3 367-491 Sentence denotes In vivo, multiple SIAT1 mRNA forms, differing only in the 5'-untranslated region, are expressed in a tissue-specific manner.
T4 492-626 Sentence denotes This mRNA heterogeneity has been attributed, at least in part, to transcription from a number of physically distinct promoter regions.
T5 627-751 Sentence denotes In mature B-lymphocytes, SIAT1 transcription initiates at P2, a regulatory region known to function only in B-lineage cells.
T6 752-987 Sentence denotes Bacterial chloramphenicol acetyltransferase (CAT) under the control of the P2 region encompassing 415 bp 5'- and 125 bp 3' of the transcriptional initiation site is efficiently expressed in Louckes, a mature B-lymphoblastoid cell line.
T7 988-1147 Sentence denotes In contrast, CAT expression in Reh, a T-null/B-null precursor line, and in HepG2, a hepatoma line, are 14-fold and >25-fold less than in Louckes, respectively.
T8 1148-1290 Sentence denotes The data is consistent with the presence of cis -acting regulatory elements residing both 5' and 3' of the P2 transcriptional initiation site.
T9 1291-1525 Sentence denotes At least 370 bp of 5'-flanking sequence, coinciding with the inclusion of AP2 and NF-kappaB sites, is necessary for high level expression in Louckes. Exon sequences 3' of the transcription start site are also important for expression.
T10 1526-1680 Sentence denotes A segment from(+)32 to(+)125 (position(+)1 is transcription start site) is capable of exerting promoter-like activity in Louckes, but not in Reh or HepG2.
T11 1681-1729 Sentence denotes CAT expression by P2 is negligible in Reh cells.
T12 1730-1804 Sentence denotes However, enhanced CAT activity is not accompanied by elevated mRNA levels.
T13 1805-1916 Sentence denotes This observation is consistent with the relief of translational restraints imposed by the(+)32 to(+)125 region.
T14 1917-2159 Sentence denotes Together, the data demonstrate that efficient and cell-specific transcription regulation in mature B lymphocytes is contained in a 495 bp P2 segment that is comprised of 370 bp of 5'-flanking region and 125 bp of transcribed region of Exon X.
T1 0-193 Sentence denotes Transcription of the beta-galactoside alpha2,6-sialyltransferase gene (SIAT1) in B-lymphocytes: cell type-specific expression correlates with presence of the divergent 5'-untranslated sequence.
T2 194-366 Sentence denotes A single gene, SIAT1, encodes ST6Gal I, the sialyltransferase that mediates transfer of alpha2,6-linked sialic acids to Galbeta1, 4GlcNAc termini of N-linked glycoproteins.
T3 367-491 Sentence denotes In vivo, multiple SIAT1 mRNA forms, differing only in the 5'-untranslated region, are expressed in a tissue-specific manner.
T4 492-626 Sentence denotes This mRNA heterogeneity has been attributed, at least in part, to transcription from a number of physically distinct promoter regions.
T5 627-751 Sentence denotes In mature B-lymphocytes, SIAT1 transcription initiates at P2, a regulatory region known to function only in B-lineage cells.
T6 752-987 Sentence denotes Bacterial chloramphenicol acetyltransferase (CAT) under the control of the P2 region encompassing 415 bp 5'- and 125 bp 3' of the transcriptional initiation site is efficiently expressed in Louckes, a mature B-lymphoblastoid cell line.
T7 988-1147 Sentence denotes In contrast, CAT expression in Reh, a T-null/B-null precursor line, and in HepG2, a hepatoma line, are 14-fold and >25-fold less than in Louckes, respectively.
T8 1148-1290 Sentence denotes The data is consistent with the presence of cis -acting regulatory elements residing both 5' and 3' of the P2 transcriptional initiation site.
T9 1291-1440 Sentence denotes At least 370 bp of 5'-flanking sequence, coinciding with the inclusion of AP2 and NF-kappaB sites, is necessary for high level expression in Louckes.
T10 1441-1525 Sentence denotes Exon sequences 3' of the transcription start site are also important for expression.
T11 1526-1680 Sentence denotes A segment from(+)32 to(+)125 (position(+)1 is transcription start site) is capable of exerting promoter-like activity in Louckes, but not in Reh or HepG2.
T12 1681-1729 Sentence denotes CAT expression by P2 is negligible in Reh cells.
T13 1730-1804 Sentence denotes However, enhanced CAT activity is not accompanied by elevated mRNA levels.
T14 1805-1916 Sentence denotes This observation is consistent with the relief of translational restraints imposed by the(+)32 to(+)125 region.
T15 1917-2159 Sentence denotes Together, the data demonstrate that efficient and cell-specific transcription regulation in mature B lymphocytes is contained in a 495 bp P2 segment that is comprised of 370 bp of 5'-flanking region and 125 bp of transcribed region of Exon X.

GO-BP

Id Subject Object Predicate Lexical cue
T1 0-13 http://purl.obolibrary.org/obo/GO_0006351 denotes Transcription
T2 558-571 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T3 658-671 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T4 1466-1479 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T5 1572-1585 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T6 882-897 http://purl.obolibrary.org/obo/GO_0006351 denotes transcriptional
T7 1258-1273 http://purl.obolibrary.org/obo/GO_0006351 denotes transcriptional
T8 797-800 http://purl.obolibrary.org/obo/GO_0004096 denotes CAT
T9 1001-1004 http://purl.obolibrary.org/obo/GO_0004096 denotes CAT
T10 1681-1684 http://purl.obolibrary.org/obo/GO_0004096 denotes CAT
T11 1748-1751 http://purl.obolibrary.org/obo/GO_0004096 denotes CAT
T12 1528-1535 http://purl.obolibrary.org/obo/GO_0035282 denotes segment
T13 2058-2065 http://purl.obolibrary.org/obo/GO_0035282 denotes segment
T14 1748-1760 http://purl.obolibrary.org/obo/GO_1902553 denotes CAT activity
T15 1855-1868 http://purl.obolibrary.org/obo/GO_0006412 denotes translational
T16 1995-2005 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T17 2009-2029 http://purl.obolibrary.org/obo/GO_0002344 denotes mature B lymphocytes
T18 2009-2029 http://purl.obolibrary.org/obo/GO_0002335 denotes mature B lymphocytes
T19 2009-2029 http://purl.obolibrary.org/obo/GO_0002901 denotes mature B lymphocytes

GO-CC

Id Subject Object Predicate Lexical cue
T1 96-100 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T2 977-981 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T3 745-750 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T4 1723-1728 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 468-474 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 468-474 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue

GlycoBiology-Epitope

Id Subject Object Predicate Lexical cue
PD-GlycoEpitope-B_T1 1300-1303 http://www.glycoepitope.jp/epitopes/AN0622 denotes 370
PD-GlycoEpitope-B_T2 2087-2090 http://www.glycoepitope.jp/epitopes/AN0622 denotes 370

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 1072-1080 Disease denotes hepatoma http://purl.obolibrary.org/obo/MONDO_0007256

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 81-94 Body_part denotes B-lymphocytes http://purl.obolibrary.org/obo/CL_0000236
T2 468-474 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T3 630-650 Body_part denotes mature B-lymphocytes http://purl.obolibrary.org/obo/CL_0000785
T4 1528-1535 Body_part denotes segment http://purl.obolibrary.org/obo/UBERON_0000914
T5 2009-2029 Body_part denotes mature B lymphocytes http://purl.obolibrary.org/obo/CL_0000785
T6 2058-2065 Body_part denotes segment http://purl.obolibrary.org/obo/UBERON_0000914

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 81-94 Cell denotes B-lymphocytes http://purl.obolibrary.org/obo/CL:0000236
T2 630-650 Cell denotes mature B-lymphocytes http://purl.obolibrary.org/obo/CL:0000785
T3 2009-2029 Cell denotes mature B lymphocytes http://purl.obolibrary.org/obo/CL:0000785