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PubMed:10460831 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 1189-1200 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T2 1377-1389 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acids

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 1189-1200 Glycan_Motif denotes sialic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY
T2 1377-1389 Glycan_Motif denotes sialic acids https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY

PMID_GLOBAL

Id Subject Object Predicate Lexical cue mondo_id
T1 464-469 DiseaseOrPhenotypicFeature denotes tumor 0005070
T2 888-891 DiseaseOrPhenotypicFeature denotes TOF 0008542
T3 892-894 DiseaseOrPhenotypicFeature denotes MS 0006861

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 1189-1200 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T2 1377-1389 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acids

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 96-101 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver
T2 553-558 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver
T3 1009-1017 http://purl.obolibrary.org/obo/MAT_0000086 denotes antennae
T4 1293-1301 http://purl.obolibrary.org/obo/MAT_0000086 denotes antennae

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 464-469 HP_0002664 denotes tumor

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 56-78 FMAID:67856 denotes cell adhesion molecule
_T2 56-78 FMAID:62915 denotes cell adhesion molecule
_T3 56-78 FMAID:167238 denotes cell adhesion molecule
_T4 56-78 FMAID:165776 denotes cell adhesion molecule
_T5 56-78 FMAID:62914 denotes cell adhesion molecule
_T6 56-78 FMAID:167237 denotes cell adhesion molecule
_T7 56-78 FMAID:165233 denotes cell adhesion molecule
_T8 56-78 FMAID:67214 denotes cell adhesion molecule
_T9 82-85 FMAID:165234 denotes CAM
_T10 96-101 FMAID:7197 denotes liver
_T11 96-101 FMAID:93672 denotes liver
_T12 170-173 FMAID:165234 denotes CAM
_T13 242-264 FMAID:67214 denotes cell adhesion molecule
_T14 242-264 FMAID:67856 denotes cell adhesion molecule
_T15 242-264 FMAID:62914 denotes cell adhesion molecule
_T16 242-264 FMAID:165776 denotes cell adhesion molecule
_T17 242-264 FMAID:62915 denotes cell adhesion molecule
_T18 242-264 FMAID:167238 denotes cell adhesion molecule
_T19 242-264 FMAID:165233 denotes cell adhesion molecule
_T20 242-264 FMAID:167237 denotes cell adhesion molecule
_T21 308-320 FMAID:62925 denotes glycoprotein
_T22 308-320 FMAID:167256 denotes glycoprotein
_T23 525-528 FMAID:165234 denotes CAM
_T24 553-558 FMAID:7197 denotes liver
_T25 553-558 FMAID:93672 denotes liver
_T26 613-616 FMAID:165234 denotes CAM
_T27 709-722 FMAID:196778 denotes glycopeptides
_T28 709-722 FMAID:82784 denotes glycopeptides
_T29 808-823 FMAID:82742 denotes Oligosaccharide
_T30 808-823 FMAID:196731 denotes Oligosaccharide
_T31 1079-1082 FMAID:165234 denotes CAM
_T32 1103-1109 FMAID:196724 denotes sugars
_T33 1337-1343 FMAID:196724 denotes sugars
_T34 1393-1396 FMAID:165234 denotes CAM
_T35 1410-1431 FMAID:198531 denotes transmembrane protein
_T36 1410-1431 FMAID:89997 denotes transmembrane protein
_T37 1410-1431 FMAID:198530 denotes transmembrane protein
_T38 1410-1431 FMAID:67858 denotes transmembrane protein
_T39 1424-1431 FMAID:67257 denotes protein
_T40 1424-1431 FMAID:165447 denotes protein

uniprot-human

Id Subject Object Predicate Lexical cue
T1 23-47 http://www.uniprot.org/uniprot/P06731 denotes carcinoembryonic antigen
T2 209-233 http://www.uniprot.org/uniprot/P06731 denotes carcinoembryonic antigen
T3 56-78 http://www.uniprot.org/uniprot/P16422 denotes cell adhesion molecule
T4 242-264 http://www.uniprot.org/uniprot/P16422 denotes cell adhesion molecule
T5 56-78 http://www.uniprot.org/uniprot/P43121 denotes cell adhesion molecule
T6 242-264 http://www.uniprot.org/uniprot/P43121 denotes cell adhesion molecule
T7 56-78 http://www.uniprot.org/uniprot/Q14CZ8 denotes cell adhesion molecule
T8 242-264 http://www.uniprot.org/uniprot/Q14CZ8 denotes cell adhesion molecule
T9 56-78 http://www.uniprot.org/uniprot/Q8N126 denotes cell adhesion molecule
T10 242-264 http://www.uniprot.org/uniprot/Q8N126 denotes cell adhesion molecule
T11 56-78 http://www.uniprot.org/uniprot/Q8NFZ8 denotes cell adhesion molecule
T12 242-264 http://www.uniprot.org/uniprot/Q8NFZ8 denotes cell adhesion molecule
T13 56-78 http://www.uniprot.org/uniprot/P50895 denotes cell adhesion molecule
T14 242-264 http://www.uniprot.org/uniprot/P50895 denotes cell adhesion molecule
T15 56-78 http://www.uniprot.org/uniprot/Q8N3J6 denotes cell adhesion molecule
T16 242-264 http://www.uniprot.org/uniprot/Q8N3J6 denotes cell adhesion molecule
T17 56-78 http://www.uniprot.org/uniprot/Q8N2F4 denotes cell adhesion molecule
T18 242-264 http://www.uniprot.org/uniprot/Q8N2F4 denotes cell adhesion molecule
T19 56-78 http://www.uniprot.org/uniprot/Q92823 denotes cell adhesion molecule
T20 242-264 http://www.uniprot.org/uniprot/Q92823 denotes cell adhesion molecule
T21 82-85 http://www.uniprot.org/uniprot/Q96HK3 denotes CAM
T22 170-173 http://www.uniprot.org/uniprot/Q96HK3 denotes CAM
T23 525-528 http://www.uniprot.org/uniprot/Q96HK3 denotes CAM
T24 613-616 http://www.uniprot.org/uniprot/Q96HK3 denotes CAM
T25 1079-1082 http://www.uniprot.org/uniprot/Q96HK3 denotes CAM
T26 1393-1396 http://www.uniprot.org/uniprot/Q96HK3 denotes CAM
T27 322-325 http://www.uniprot.org/uniprot/P02818 denotes BGP
T28 322-325 http://www.uniprot.org/uniprot/P84351 denotes BGP
T29 322-325 http://www.uniprot.org/uniprot/Q9UQV9 denotes BGP
T30 330-335 http://www.uniprot.org/uniprot/Q9UQV9 denotes CD66a
T31 892-894 http://www.uniprot.org/uniprot/Q99707 denotes MS

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 322-325 http://www.uniprot.org/uniprot/P86546 denotes BGP
T2 330-335 http://www.uniprot.org/uniprot/P31809 denotes CD66a
T3 892-894 http://www.uniprot.org/uniprot/A6H5Y3 denotes MS

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 48-55 http://purl.bioontology.org/ontology/NCBITAXON/353209 denotes related
T2 234-241 http://purl.bioontology.org/ontology/NCBITAXON/353209 denotes related
T3 365-383 http://purl.bioontology.org/ontology/STY/T043 denotes cellular functions
T4 1009-1017 http://purl.bioontology.org/ontology/NCBITAXON/293542 denotes antennae
T5 1046-1059 http://purl.bioontology.org/ontology/NCBITAXON/691256 denotes heterogeneous
T6 1046-1059 http://purl.bioontology.org/ontology/NCBITAXON/1113441 denotes heterogeneous
T7 1293-1301 http://purl.bioontology.org/ontology/NCBITAXON/293542 denotes antennae

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-163 Sentence denotes N-glycosylation of the carcinoembryonic antigen related cell adhesion molecule, C-CAM, from rat liver: detection of oversialylated bi- and triantennary structures.
TextSentencer_T2 164-265 Sentence denotes Rat C-CAM is a ubiquitous, transmembrane and carcinoembryonic antigen related cell adhesion molecule.
TextSentencer_T3 266-336 Sentence denotes The human counterpart is known as biliary glycoprotein (BGP) or CD66a.
TextSentencer_T4 337-482 Sentence denotes It is involved in different cellular functions ranging from intercellular adhesion, microbial receptor activity, signaling and tumor suppression.
TextSentencer_T5 483-582 Sentence denotes In the present study N-glycosylation of C-CAM immunopurified from rat liver was analyzed in detail.
TextSentencer_T6 583-661 Sentence denotes The primary sequence of rat C-CAM contains 15 potential N-glycosylation sites.
TextSentencer_T7 662-807 Sentence denotes The N-glycans were enzymatically released from glycopeptides, fluorescently labeled with 2-aminobenzamide, and separated by two-dimensional HPLC.
TextSentencer_T8 808-895 Sentence denotes Oligosaccharide structures were characterized by enzymatic sequencing and MALDI-TOF-MS.
TextSentencer_T9 896-959 Sentence denotes Mainly bi- and triantennary complex structures were identified.
TextSentencer_T10 960-1083 Sentence denotes The presence of type I and type II chains in the antennae of these glycans results in heterogeneous glycosylation of C-CAM.
TextSentencer_T11 1084-1302 Sentence denotes Sialylation of the sugars was found to be unusual; bi- and triantennary glycans contained three and four sialic acid residues, respectively, and this linkage seemed to be restricted to the type I chain in the antennae.
TextSentencer_T12 1303-1390 Sentence denotes Approximately 20% of the detected sugars contain these unusual numbers of sialic acids.
TextSentencer_T13 1391-1459 Sentence denotes C-CAM is the first transmembrane protein found to be oversialylated.
T1 0-163 Sentence denotes N-glycosylation of the carcinoembryonic antigen related cell adhesion molecule, C-CAM, from rat liver: detection of oversialylated bi- and triantennary structures.
T2 164-265 Sentence denotes Rat C-CAM is a ubiquitous, transmembrane and carcinoembryonic antigen related cell adhesion molecule.
T3 266-336 Sentence denotes The human counterpart is known as biliary glycoprotein (BGP) or CD66a.
T4 337-482 Sentence denotes It is involved in different cellular functions ranging from intercellular adhesion, microbial receptor activity, signaling and tumor suppression.
T5 483-582 Sentence denotes In the present study N-glycosylation of C-CAM immunopurified from rat liver was analyzed in detail.
T6 583-661 Sentence denotes The primary sequence of rat C-CAM contains 15 potential N-glycosylation sites.
T7 662-807 Sentence denotes The N-glycans were enzymatically released from glycopeptides, fluorescently labeled with 2-aminobenzamide, and separated by two-dimensional HPLC.
T8 808-895 Sentence denotes Oligosaccharide structures were characterized by enzymatic sequencing and MALDI-TOF-MS.
T9 896-959 Sentence denotes Mainly bi- and triantennary complex structures were identified.
T10 960-1083 Sentence denotes The presence of type I and type II chains in the antennae of these glycans results in heterogeneous glycosylation of C-CAM.
T11 1084-1302 Sentence denotes Sialylation of the sugars was found to be unusual; bi- and triantennary glycans contained three and four sialic acid residues, respectively, and this linkage seemed to be restricted to the type I chain in the antennae.
T12 1303-1390 Sentence denotes Approximately 20% of the detected sugars contain these unusual numbers of sialic acids.
T13 1391-1459 Sentence denotes C-CAM is the first transmembrane protein found to be oversialylated.
T1 0-163 Sentence denotes N-glycosylation of the carcinoembryonic antigen related cell adhesion molecule, C-CAM, from rat liver: detection of oversialylated bi- and triantennary structures.
T2 164-265 Sentence denotes Rat C-CAM is a ubiquitous, transmembrane and carcinoembryonic antigen related cell adhesion molecule.
T3 266-336 Sentence denotes The human counterpart is known as biliary glycoprotein (BGP) or CD66a.
T4 337-482 Sentence denotes It is involved in different cellular functions ranging from intercellular adhesion, microbial receptor activity, signaling and tumor suppression.
T5 483-582 Sentence denotes In the present study N-glycosylation of C-CAM immunopurified from rat liver was analyzed in detail.
T6 583-661 Sentence denotes The primary sequence of rat C-CAM contains 15 potential N-glycosylation sites.
T7 662-807 Sentence denotes The N-glycans were enzymatically released from glycopeptides, fluorescently labeled with 2-aminobenzamide, and separated by two-dimensional HPLC.
T8 808-895 Sentence denotes Oligosaccharide structures were characterized by enzymatic sequencing and MALDI-TOF-MS.
T9 896-959 Sentence denotes Mainly bi- and triantennary complex structures were identified.
T10 960-1083 Sentence denotes The presence of type I and type II chains in the antennae of these glycans results in heterogeneous glycosylation of C-CAM.
T11 1084-1302 Sentence denotes Sialylation of the sugars was found to be unusual; bi- and triantennary glycans contained three and four sialic acid residues, respectively, and this linkage seemed to be restricted to the type I chain in the antennae.
T12 1303-1390 Sentence denotes Approximately 20% of the detected sugars contain these unusual numbers of sialic acids.
T13 1391-1459 Sentence denotes C-CAM is the first transmembrane protein found to be oversialylated.

GO-BP

Id Subject Object Predicate Lexical cue
T1 2-15 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T2 506-519 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T3 641-654 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T4 1060-1073 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 56-69 http://purl.obolibrary.org/obo/GO_0007155 denotes cell adhesion
T6 242-255 http://purl.obolibrary.org/obo/GO_0007155 denotes cell adhesion
T7 56-78 http://purl.obolibrary.org/obo/GO_0060352 denotes cell adhesion molecule
T8 242-264 http://purl.obolibrary.org/obo/GO_0060352 denotes cell adhesion molecule
T9 56-78 http://purl.obolibrary.org/obo/GO_0007155 denotes cell adhesion molecule
T10 242-264 http://purl.obolibrary.org/obo/GO_0007155 denotes cell adhesion molecule
T11 365-373 http://purl.obolibrary.org/obo/GO_0007349 denotes cellular
T12 431-459 http://purl.obolibrary.org/obo/GO_0005057 denotes receptor activity, signaling
T13 431-459 http://purl.obolibrary.org/obo/GO_0004888 denotes receptor activity, signaling
T14 431-459 http://purl.obolibrary.org/obo/GO_0038023 denotes receptor activity, signaling
T15 450-459 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T16 1084-1095 http://purl.obolibrary.org/obo/GO_0097503 denotes Sialylation

GO-CC

Id Subject Object Predicate Lexical cue
T1 56-60 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T2 242-246 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T3 191-204 http://purl.obolibrary.org/obo/GO_0016021 denotes transmembrane
T4 191-204 http://purl.obolibrary.org/obo/GO_0044214 denotes transmembrane
T5 1410-1423 http://purl.obolibrary.org/obo/GO_0016021 denotes transmembrane
T6 1410-1423 http://purl.obolibrary.org/obo/GO_0044214 denotes transmembrane

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 96-101 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T2 553-558 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T3 1009-1017 http://purl.obolibrary.org/obo/UBERON_0000972 denotes antennae
T4 1293-1301 http://purl.obolibrary.org/obo/UBERON_0000972 denotes antennae

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 40-47 http://edamontology.org/topic_2830 denotes antigen
T2 70-78 http://edamontology.org/topic_2839 denotes molecule
T3 226-233 http://edamontology.org/topic_2830 denotes antigen
T4 256-264 http://edamontology.org/topic_2839 denotes molecule
T5 270-275 http://edamontology.org/topic_2815 denotes human
T6 498-503 http://edamontology.org/topic_3678 denotes study
T7 595-603 http://edamontology.org/topic_0080 denotes sequence
T8 595-603 http://edamontology.org/topic_3168 denotes sequence
T9 867-877 http://edamontology.org/topic_0080 denotes sequencing
T10 867-877 http://edamontology.org/topic_3168 denotes sequencing
T11 1234-1241 http://edamontology.org/topic_0102 denotes linkage
T12 1424-1431 http://edamontology.org/topic_0078 denotes protein
T13 1424-1437 http://edamontology.org/topic_0736 denotes protein found
T14 1424-1437 http://edamontology.org/topic_0130 denotes protein found

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 103-112 http://edamontology.org/operation_2423 denotes detection
T2 152-162 http://edamontology.org/data_0883 denotes structures
T3 374-383 http://edamontology.org/operation_0004 denotes functions
T4 595-603 http://edamontology.org/data_2044 denotes sequence
T5 595-603 http://edamontology.org/operation_3218 denotes sequence
T6 824-834 http://edamontology.org/data_0883 denotes structures
T7 867-877 http://edamontology.org/data_2044 denotes sequencing
T8 867-877 http://edamontology.org/operation_3218 denotes sequencing
T9 932-942 http://edamontology.org/data_0883 denotes structures
T10 932-958 http://edamontology.org/data_3035 denotes structures were identified
T11 948-958 http://edamontology.org/data_2611 denotes identified
T12 948-958 http://edamontology.org/data_0842 denotes identified
T13 1201-1209 http://edamontology.org/data_1756 denotes residues
T14 1328-1336 http://edamontology.org/operation_2423 denotes detected
T15 1410-1431 http://edamontology.org/operation_0270 denotes transmembrane protein
T16 1410-1431 http://edamontology.org/operation_2241 denotes transmembrane protein
T17 1410-1431 http://edamontology.org/operation_0269 denotes transmembrane protein
T18 1424-1431 http://edamontology.org/format_1208 denotes protein
T19 1424-1431 http://edamontology.org/data_1467 denotes protein

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 96-101 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver
T2 553-558 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver
T3 1009-1017 http://purl.obolibrary.org/obo/MAT_0000086 denotes antennae
T4 1293-1301 http://purl.obolibrary.org/obo/MAT_0000086 denotes antennae

GlycoBiology-Motifs

Id Subject Object Predicate Lexical cue
T1 666-675 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 96-101 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
PD-UBERON-AE-B_T2 553-558 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
PD-UBERON-AE-B_T3 1009-1017 http://purl.obolibrary.org/obo/UBERON_0000972 denotes antennae
PD-UBERON-AE-B_T4 1293-1301 http://purl.obolibrary.org/obo/UBERON_0000972 denotes antennae

GlycoBiology-Epitope

Id Subject Object Predicate Lexical cue
PD-GlycoEpitope-B_T1 738-745 id denotes labeled

GlyTouCan-IUPAC

Id Subject Object Predicate Lexical cue
GlycanIUPAC_T1 1103-1109 "http://rdf.glycoinfo.org/glycan/G59665TO" denotes sugars
GlycanIUPAC_T2 1337-1343 "http://rdf.glycoinfo.org/glycan/G59665TO" denotes sugars
GlycanIUPAC_T3 1103-1109 "http://rdf.glycoinfo.org/glycan/G32915EI" denotes sugars
GlycanIUPAC_T4 1337-1343 "http://rdf.glycoinfo.org/glycan/G32915EI" denotes sugars
GlycanIUPAC_T5 1103-1109 "http://rdf.glycoinfo.org/glycan/G60625TS" denotes sugars
GlycanIUPAC_T6 1337-1343 "http://rdf.glycoinfo.org/glycan/G60625TS" denotes sugars

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 80-85 Disease denotes C-CAM http://purl.obolibrary.org/obo/MONDO_0016580
T2 168-173 Disease denotes C-CAM http://purl.obolibrary.org/obo/MONDO_0016580
T3 464-469 Disease denotes tumor http://purl.obolibrary.org/obo/MONDO_0005070
T4 523-528 Disease denotes C-CAM http://purl.obolibrary.org/obo/MONDO_0016580
T5 611-616 Disease denotes C-CAM http://purl.obolibrary.org/obo/MONDO_0016580
T6 1077-1082 Disease denotes C-CAM http://purl.obolibrary.org/obo/MONDO_0016580
T7 1391-1396 Disease denotes C-CAM http://purl.obolibrary.org/obo/MONDO_0016580

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 92-95 OrganismTaxon denotes rat 10114|10116
T3 270-275 OrganismTaxon denotes human 9606
T4 549-552 OrganismTaxon denotes rat 10114|10116
T6 607-610 OrganismTaxon denotes rat 10114|10116

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 96-101 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097
T2 553-558 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097
T3 1009-1017 Body_part denotes antennae http://purl.obolibrary.org/obo/MAT_0000086
T4 1293-1301 Body_part denotes antennae http://purl.obolibrary.org/obo/MAT_0000086

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 96-101 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T2 191-204 Body_part denotes transmembrane http://purl.obolibrary.org/obo/GO_0016020
T3 553-558 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T4 1410-1423 Body_part denotes transmembrane http://purl.obolibrary.org/obo/GO_0016020

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 80-85 Phenotype denotes C-CAM HP:0010959
T2 168-173 Phenotype denotes C-CAM HP:0010959
T3 464-469 Phenotype denotes tumor HP:0002664
T4 523-528 Phenotype denotes C-CAM HP:0010959
T5 611-616 Phenotype denotes C-CAM HP:0010959
T6 1077-1082 Phenotype denotes C-CAM HP:0010959
T7 1391-1396 Phenotype denotes C-CAM HP:0010959

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 976-982 Cell denotes type I http://purl.obolibrary.org/obo/CL:0004120|http://purl.obolibrary.org/obo/CL:0004138
T3 1273-1279 Cell denotes type I http://purl.obolibrary.org/obo/CL:0004120|http://purl.obolibrary.org/obo/CL:0004138