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PubMed:10460827 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 648-656 https://glytoucan.org/Structures/Glycans/G00057MO denotes LacdiNAc
T2 648-656 https://glytoucan.org/Structures/Glycans/G31736BK denotes LacdiNAc
T3 857-865 https://glytoucan.org/Structures/Glycans/G00057MO denotes LacdiNAc
T4 857-865 https://glytoucan.org/Structures/Glycans/G31736BK denotes LacdiNAc

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 648-656 Glycan_Motif denotes LacdiNAc https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G31736BK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00057MO
T3 857-865 Glycan_Motif denotes LacdiNAc https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G31736BK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00057MO

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 648-656 https://glytoucan.org/Structures/Glycans/G00057MO denotes LacdiNAc
T2 648-656 https://glytoucan.org/Structures/Glycans/G31736BK denotes LacdiNAc
T3 857-865 https://glytoucan.org/Structures/Glycans/G00057MO denotes LacdiNAc
T4 857-865 https://glytoucan.org/Structures/Glycans/G31736BK denotes LacdiNAc

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 1003-1008 http://purl.obolibrary.org/obo/MAT_0000488 denotes later

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 34-38 FMAID:84120 denotes exon
_T2 34-38 FMAID:198073 denotes exon
_T3 39-45 FMAID:198075 denotes intron
_T4 39-45 FMAID:84121 denotes intron
_T5 46-58 FMAID:166081 denotes organization
_T6 46-58 FMAID:67498 denotes organization
_T7 117-121 FMAID:198663 denotes gene
_T8 219-223 FMAID:198663 denotes gene
_T9 262-269 FMAID:256050 denotes tissues
_T10 315-325 FMAID:82739 denotes amino acid
_T11 315-325 FMAID:196728 denotes amino acid
_T12 510-515 FMAID:68646 denotes cells
_T13 510-515 FMAID:169002 denotes cells
_T14 898-902 FMAID:198663 denotes gene
_T15 936-941 FMAID:198073 denotes exons
_T16 936-941 FMAID:84120 denotes exons
_T17 973-978 FMAID:84120 denotes exons
_T18 973-978 FMAID:198073 denotes exons
_T19 1003-1008 FMAID:171168 denotes later
_T20 1003-1008 FMAID:30332 denotes later
_T21 1054-1058 FMAID:198663 denotes Gene
_T22 1092-1099 FMAID:84116 denotes genomic
_T23 1092-1099 FMAID:198062 denotes genomic
_T24 1345-1351 FMAID:256050 denotes tissue
_T25 1395-1400 FMAID:198073 denotes exons
_T26 1395-1400 FMAID:84120 denotes exons
_T27 1437-1442 FMAID:198073 denotes exons
_T28 1437-1442 FMAID:84120 denotes exons
_T29 1474-1479 FMAID:84120 denotes exons
_T30 1474-1479 FMAID:198073 denotes exons

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 73-77 http://purl.bioontology.org/ontology/NCBITAXON/158455 denotes beta
T2 73-77 http://purl.bioontology.org/ontology/NCBITAXON/3554 denotes beta
T3 262-269 http://purl.bioontology.org/ontology/STY/T024 denotes tissues
T4 315-334 http://purl.bioontology.org/ontology/STY/T087 denotes amino acid sequence
T5 412-416 http://purl.bioontology.org/ontology/NCBITAXON/3554 denotes beta
T6 412-416 http://purl.bioontology.org/ontology/NCBITAXON/158455 denotes beta
T7 510-515 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T8 1345-1351 http://purl.bioontology.org/ontology/STY/T024 denotes tissue

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-122 Sentence denotes Molecular cloning, expression and exon/intron organization of the bovine beta-galactoside alpha2,6-sialyltransferase gene.
TextSentencer_T2 123-224 Sentence denotes In this study, we report the first isolation and characterization of a bovine sialyltransferase gene.
TextSentencer_T3 225-481 Sentence denotes Bovine cDNAs prepared from different tissues contain an open-reading frame encoding a 405 amino acid sequence showing 83%, 75%, and 60% identity with human, murine, and chicken ST6Gal I (beta-galactoside alpha2,6-sialyltransferase) sequences, respectively.
TextSentencer_T4 482-712 Sentence denotes When transfected into COS-7 cells, a recombinant enzyme was obtained which catalyzed the in vitro alpha2, 6-sialylation of LacNAc (NeuAcalpha2-6Galbeta1-4GlcNAc) and LacdiNAc (NeuAcalpha2-6GalNAcbeta1-4GlcNAc) acceptor substrates.
TextSentencer_T5 713-764 Sentence denotes The K (m) values were 2.8 and 6.9 mM, respectively.
TextSentencer_T6 765-881 Sentence denotes Different relative efficiencies (Vmax/Km) for the two precursors (36 for LacNAc and 4.3 for LacdiNAc) were observed.
TextSentencer_T7 882-997 Sentence denotes Bovine ST6Gal I gene consists of four 5'-untranslated exons E(-2) to E(1), and five coding exons from E(2) to E(6).
TextSentencer_T8 998-1047 Sentence denotes This later carries a 3'-untranslated region of 2.
TextSentencer_T9 1048-1053 Sentence denotes 7 kb.
TextSentencer_T10 1054-1104 Sentence denotes Gene sequence spans at least 80 kb of genomic DNA.
TextSentencer_T11 1105-1152 Sentence denotes Two processed pseudogenes have been identified.
TextSentencer_T12 1153-1218 Sentence denotes They are 94.3 and 95.6% similar to the bovine cDNA, respectively.
TextSentencer_T13 1219-1265 Sentence denotes Three families of mRNA isoforms were isolated.
TextSentencer_T14 1266-1371 Sentence denotes They differed by their 5'-untranslated regions and could be generated by three tissue-specific promoters.
TextSentencer_T15 1372-1493 Sentence denotes Family 1 is made up of exons E(-2) and E(1) to E(6), family 2 of exons E(-1) to E(6), and family 3 of exons E(1) to E(6).
TextSentencer_T16 1494-1606 Sentence denotes Tissular distribution of transcript families appears noticeably different than those described in human and rat.
T1 0-122 Sentence denotes Molecular cloning, expression and exon/intron organization of the bovine beta-galactoside alpha2,6-sialyltransferase gene.
T2 123-224 Sentence denotes In this study, we report the first isolation and characterization of a bovine sialyltransferase gene.
T3 225-481 Sentence denotes Bovine cDNAs prepared from different tissues contain an open-reading frame encoding a 405 amino acid sequence showing 83%, 75%, and 60% identity with human, murine, and chicken ST6Gal I (beta-galactoside alpha2,6-sialyltransferase) sequences, respectively.
T4 482-712 Sentence denotes When transfected into COS-7 cells, a recombinant enzyme was obtained which catalyzed the in vitro alpha2, 6-sialylation of LacNAc (NeuAcalpha2-6Galbeta1-4GlcNAc) and LacdiNAc (NeuAcalpha2-6GalNAcbeta1-4GlcNAc) acceptor substrates.
T5 713-764 Sentence denotes The K (m) values were 2.8 and 6.9 mM, respectively.
T6 765-881 Sentence denotes Different relative efficiencies (Vmax/Km) for the two precursors (36 for LacNAc and 4.3 for LacdiNAc) were observed.
T7 882-997 Sentence denotes Bovine ST6Gal I gene consists of four 5'-untranslated exons E(-2) to E(1), and five coding exons from E(2) to E(6).
T8 998-1047 Sentence denotes This later carries a 3'-untranslated region of 2.
T9 1048-1053 Sentence denotes 7 kb.
T10 1054-1104 Sentence denotes Gene sequence spans at least 80 kb of genomic DNA.
T11 1105-1152 Sentence denotes Two processed pseudogenes have been identified.
T12 1153-1218 Sentence denotes They are 94.3 and 95.6% similar to the bovine cDNA, respectively.
T13 1219-1265 Sentence denotes Three families of mRNA isoforms were isolated.
T14 1266-1371 Sentence denotes They differed by their 5'-untranslated regions and could be generated by three tissue-specific promoters.
T15 1372-1493 Sentence denotes Family 1 is made up of exons E(-2) and E(1) to E(6), family 2 of exons E(-1) to E(6), and family 3 of exons E(1) to E(6).
T16 1494-1606 Sentence denotes Tissular distribution of transcript families appears noticeably different than those described in human and rat.
T1 0-122 Sentence denotes Molecular cloning, expression and exon/intron organization of the bovine beta-galactoside alpha2,6-sialyltransferase gene.
T2 123-224 Sentence denotes In this study, we report the first isolation and characterization of a bovine sialyltransferase gene.
T3 225-481 Sentence denotes Bovine cDNAs prepared from different tissues contain an open-reading frame encoding a 405 amino acid sequence showing 83%, 75%, and 60% identity with human, murine, and chicken ST6Gal I (beta-galactoside alpha2,6-sialyltransferase) sequences, respectively.
T4 482-712 Sentence denotes When transfected into COS-7 cells, a recombinant enzyme was obtained which catalyzed the in vitro alpha2, 6-sialylation of LacNAc (NeuAcalpha2-6Galbeta1-4GlcNAc) and LacdiNAc (NeuAcalpha2-6GalNAcbeta1-4GlcNAc) acceptor substrates.
T5 713-764 Sentence denotes The K (m) values were 2.8 and 6.9 mM, respectively.
T6 765-881 Sentence denotes Different relative efficiencies (Vmax/Km) for the two precursors (36 for LacNAc and 4.3 for LacdiNAc) were observed.
T7 882-997 Sentence denotes Bovine ST6Gal I gene consists of four 5'-untranslated exons E(-2) to E(1), and five coding exons from E(2) to E(6).
T8 998-1047 Sentence denotes This later carries a 3'-untranslated region of 2.
T9 1048-1053 Sentence denotes 7 kb.
T10 1054-1104 Sentence denotes Gene sequence spans at least 80 kb of genomic DNA.
T11 1105-1152 Sentence denotes Two processed pseudogenes have been identified.
T12 1153-1218 Sentence denotes They are 94.3 and 95.6% similar to the bovine cDNA, respectively.
T13 1219-1265 Sentence denotes Three families of mRNA isoforms were isolated.
T14 1266-1371 Sentence denotes They differed by their 5'-untranslated regions and could be generated by three tissue-specific promoters.
T15 1372-1493 Sentence denotes Family 1 is made up of exons E(-2) and E(1) to E(6), family 2 of exons E(-1) to E(6), and family 3 of exons E(1) to E(6).
T16 1494-1606 Sentence denotes Tissular distribution of transcript families appears noticeably different than those described in human and rat.

GO-BP

Id Subject Object Predicate Lexical cue
T1 590-601 http://purl.obolibrary.org/obo/GO_0097503 denotes sialylation
T2 942-946 http://purl.obolibrary.org/obo/GO_0010309 denotes E(-2
T3 945-952 http://purl.obolibrary.org/obo/GO_0010309 denotes 2) to E
T4 984-987 http://purl.obolibrary.org/obo/GO_0010309 denotes E(2
T5 1404-1412 http://purl.obolibrary.org/obo/GO_0010309 denotes 2) and E
T6 951-954 http://purl.obolibrary.org/obo/GO_0043715 denotes E(1
T7 951-954 http://purl.obolibrary.org/obo/GO_0043874 denotes E(1
T8 1411-1414 http://purl.obolibrary.org/obo/GO_0043715 denotes E(1
T9 1411-1414 http://purl.obolibrary.org/obo/GO_0043874 denotes E(1
T10 1413-1420 http://purl.obolibrary.org/obo/GO_0043715 denotes 1) to E
T11 1413-1420 http://purl.obolibrary.org/obo/GO_0043874 denotes 1) to E
T12 1446-1453 http://purl.obolibrary.org/obo/GO_0043715 denotes 1) to E
T13 1446-1453 http://purl.obolibrary.org/obo/GO_0043874 denotes 1) to E
T14 1443-1447 http://purl.obolibrary.org/obo/GO_0043715 denotes E(-1
T15 1443-1447 http://purl.obolibrary.org/obo/GO_0043874 denotes E(-1
T16 1519-1529 http://purl.obolibrary.org/obo/GO_0006351 denotes transcript

GO-CC

Id Subject Object Predicate Lexical cue
T1 510-515 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 262-269 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues
T2 1345-1351 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 1003-1008 http://purl.obolibrary.org/obo/MAT_0000488 denotes later

GlycoBiology-Motifs

Id Subject Object Predicate Lexical cue
T1 648-656 http://rdf.glycoinfo.org/glycan/G00057MO denotes LacdiNAc
T2 857-865 http://rdf.glycoinfo.org/glycan/G00057MO denotes LacdiNAc

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 262-269 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues
PD-UBERON-AE-B_T2 1345-1351 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T3 46-58 http://purl.obolibrary.org/obo/UBERON_0000062 denotes organization

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 605-611 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T2 838-844 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 1003-1008 Body_part denotes later http://purl.obolibrary.org/obo/MAT_0000488

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 605-611 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T2 838-844 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1345-1351 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479

GlyCosmos15-Taxon

Id Subject Object Predicate Lexical cue db_id
T1 66-72 Organism denotes bovine 9913
T2 194-200 Organism denotes bovine 9913
T3 225-231 Organism denotes Bovine 9913
T4 375-380 Organism denotes human 9606
T5 882-888 Organism denotes Bovine 9913
T6 1192-1198 Organism denotes bovine 9913
T7 1592-1597 Organism denotes human 9606
T8 1602-1605 Organism denotes rat 10114|10116

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-122 Sentence denotes Molecular cloning, expression and exon/intron organization of the bovine beta-galactoside alpha2,6-sialyltransferase gene.
T2 123-224 Sentence denotes In this study, we report the first isolation and characterization of a bovine sialyltransferase gene.
T3 225-481 Sentence denotes Bovine cDNAs prepared from different tissues contain an open-reading frame encoding a 405 amino acid sequence showing 83%, 75%, and 60% identity with human, murine, and chicken ST6Gal I (beta-galactoside alpha2,6-sialyltransferase) sequences, respectively.
T4 482-712 Sentence denotes When transfected into COS-7 cells, a recombinant enzyme was obtained which catalyzed the in vitro alpha2, 6-sialylation of LacNAc (NeuAcalpha2-6Galbeta1-4GlcNAc) and LacdiNAc (NeuAcalpha2-6GalNAcbeta1-4GlcNAc) acceptor substrates.
T5 713-764 Sentence denotes The K (m) values were 2.8 and 6.9 mM, respectively.
T6 765-881 Sentence denotes Different relative efficiencies (Vmax/Km) for the two precursors (36 for LacNAc and 4.3 for LacdiNAc) were observed.
T7 882-997 Sentence denotes Bovine ST6Gal I gene consists of four 5'-untranslated exons E(-2) to E(1), and five coding exons from E(2) to E(6).
T8 998-1047 Sentence denotes This later carries a 3'-untranslated region of 2.
T9 1048-1053 Sentence denotes 7 kb.
T10 1054-1104 Sentence denotes Gene sequence spans at least 80 kb of genomic DNA.
T11 1105-1152 Sentence denotes Two processed pseudogenes have been identified.
T12 1153-1218 Sentence denotes They are 94.3 and 95.6% similar to the bovine cDNA, respectively.
T13 1219-1265 Sentence denotes Three families of mRNA isoforms were isolated.
T14 1266-1371 Sentence denotes They differed by their 5'-untranslated regions and could be generated by three tissue-specific promoters.
T15 1372-1493 Sentence denotes Family 1 is made up of exons E(-2) and E(1) to E(6), family 2 of exons E(-1) to E(6), and family 3 of exons E(1) to E(6).
T16 1494-1606 Sentence denotes Tissular distribution of transcript families appears noticeably different than those described in human and rat.

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 262-269 Body_part denotes tissues FMA:9637
T2 1345-1351 Body_part denotes tissue FMA:9637

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 1003-1008 Body_part denotes later http://purl.obolibrary.org/obo/MAT_0000488

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 66-72 OrganismTaxon denotes bovine 9913
T2 194-200 OrganismTaxon denotes bovine 9913
T3 225-231 OrganismTaxon denotes Bovine 9913
T4 375-380 OrganismTaxon denotes human 9606
T5 882-888 OrganismTaxon denotes Bovine 9913
T6 1192-1198 OrganismTaxon denotes bovine 9913
T7 1592-1597 OrganismTaxon denotes human 9606
T8 1602-1605 OrganismTaxon denotes rat 10114|10116

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1345-1351 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479