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PubMed:10438913 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 0-4 protein denotes IL-2
T2 49-62 cell_type denotes human T cells
T3 74-78 protein denotes CD28
T4 101-105 protein denotes CD28
T5 297-301 protein denotes CD28
T6 329-338 protein denotes cytokines
T7 348-352 protein denotes IL-2
T8 406-410 protein denotes CD28
T9 444-463 protein denotes natural ligand CD80
T10 509-513 protein denotes IL-2
T11 536-544 protein denotes cytokine
T12 560-573 DNA denotes IL-2 promoter
T13 612-616 protein denotes CD28
T14 643-652 protein denotes NF-kappaB
T15 657-661 protein denotes AP-1
T16 674-679 protein denotes NF-AT
T17 694-707 DNA denotes IL-2 promoter
T18 902-905 protein denotes Abs
T19 914-918 protein denotes IL-2
T20 927-940 protein denotes IL-2 receptor
T21 991-995 protein denotes CD28
T22 1015-1019 protein denotes IL-2
T23 1069-1082 cell_type denotes T cell blasts
T24 1088-1092 protein denotes CD80
T25 1150-1154 protein denotes IL-2
T26 1188-1192 protein denotes CD28
T27 1268-1272 protein denotes IL-2
T28 1295-1309 protein denotes soluble factor
T29 1325-1330 protein denotes NF-AT

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 0-5 NP denotes IL-2-
C2 74-78 NP denotes CD28
C3 101-105 NP denotes CD28
C4 153-167 NP denotes the mechanisms
C5 171-176 NP denotes which
C6 177-179 NP denotes it
C7 187-190 NP denotes its
C8 297-301 NP denotes CD28
C10 348-352 NP denotes IL-2
C20 357-377 NP denotes T cell proliferation
C9 406-410 NP denotes CD28
C12 395-463 NP denotes a model of CD28 costimulation using PMA plus the natural ligand CD80
C13 464-468 NP denotes that
C11 509-513 NP denotes IL-2
C14 612-617 NP denotes CD28-
C15 722-742 NP denotes T cell proliferation
C16 838-858 NP denotes T cell proliferation
C17 914-918 NP denotes IL-2
C18 991-995 NP denotes CD28
C25 961-995 NP denotes this form of costimulation by CD28
C19 1015-1019 NP denotes IL-2
C22 1150-1154 NP denotes IL-2
C26 1188-1206 NP denotes CD28 costimulation
C23 1268-1272 NP denotes IL-2
C24 1274-1279 NP denotes which
R1 C3 C2 coref-ident CD28,CD28
R2 C5 C4 coref-relat which,the mechanisms
R3 C6 C3 coref-pron it,CD28
R4 C7 C3 coref-pron its,CD28
R5 C8 C3 coref-ident CD28,CD28
R6 C10 C1 coref-ident IL-2,IL-2-
R7 C9 C8 coref-ident CD28,CD28
R8 C13 C12 coref-relat that,a model of CD28 costimulation using PMA plus the natural ligand CD80
R9 C11 C10 coref-ident IL-2,IL-2
R10 C14 C9 coref-ident CD28-,CD28
R11 C15 C20 coref-ident T cell proliferation,T cell proliferation
R12 C16 C15 coref-ident T cell proliferation,T cell proliferation
R13 C17 C11 coref-ident IL-2,IL-2
R14 C18 C14 coref-ident CD28,CD28-
R15 C19 C17 coref-ident IL-2,IL-2
R16 C22 C19 coref-ident IL-2,IL-2
R17 C26 C25 coref-ident CD28 costimulation,this form of costimulation by CD28
R18 C23 C22 coref-ident IL-2,IL-2

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-79 Sentence denotes IL-2-independent activation and proliferation in human T cells induced by CD28.
S2 80-228 Sentence denotes Although the role of CD28 in T cell costimulation is firmly established, the mechanisms by which it exerts its costimulatory actions are less clear.
S3 229-378 Sentence denotes In many circumstances it is difficult to distinguish the effects of CD28 from subsequent actions of cytokines, such as IL-2, on T cell proliferation.
S4 379-586 Sentence denotes Here, we report a model of CD28 costimulation using PMA plus the natural ligand CD80 that resulted in very limited stimulation of IL-2, as evidenced by both cytokine production and IL-2 promoter stimulation.
S5 587-708 Sentence denotes Promoter assays revealed CD28-dependent effects on both NF-kappaB and AP-1, but not on NF-AT or the intact IL-2 promoter.
S6 709-828 Sentence denotes In addition, T cell proliferation was completely resistant to the actions of the immunosuppressant cyclosporin A (CsA).
S7 829-1020 Sentence denotes Moreover T cell proliferation was unaffected by the addition of blocking Abs to both IL-2 and the IL-2 receptor, demonstrating that this form of costimulation by CD28 was independent of IL-2.
S8 1021-1170 Sentence denotes We also investigated the effects of stimulating T cell blasts with CD80 alone and found that there was a limited requirement for IL-2 in this system.
S9 1171-1347 Sentence denotes We conclude that CD28 costimulation can cause substantial T cell proliferation in the absence of IL-2, which is driven by a soluble factor independent of NF-AT transactivation.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 0-4 protein_molecule denotes IL-2
T2 49-62 cell_type denotes human T cells
T3 74-78 protein_molecule denotes CD28
T4 101-105 protein_molecule denotes CD28
T5 109-129 other_name denotes T cell costimulation
T6 297-301 protein_molecule denotes CD28
T7 329-338 protein_family_or_group denotes cytokines
T8 348-352 protein_molecule denotes IL-2
T9 357-377 other_name denotes T cell proliferation
T10 406-410 protein_molecule denotes CD28
T11 431-434 other_organic_compound denotes PMA
T12 444-463 protein_molecule denotes natural ligand CD80
T13 509-513 protein_molecule denotes IL-2
T14 536-544 protein_family_or_group denotes cytokine
T15 560-564 protein_molecule denotes IL-2
T16 612-616 protein_molecule denotes CD28
T17 643-652 protein_complex denotes NF-kappaB
T18 657-661 protein_molecule denotes AP-1
T19 674-679 protein_molecule denotes NF-AT
T20 694-698 protein_molecule denotes IL-2
T21 722-742 other_name denotes T cell proliferation
T22 790-821 other_organic_compound denotes immunosuppressant cyclosporin A
T23 823-826 other_organic_compound denotes CsA
T24 838-858 other_name denotes T cell proliferation
T25 902-905 protein_family_or_group denotes Abs
T26 914-918 protein_molecule denotes IL-2
T27 927-931 protein_molecule denotes IL-2
T28 991-995 protein_molecule denotes CD28
T29 1015-1019 protein_molecule denotes IL-2
T30 1069-1082 cell_type denotes T cell blasts
T31 1088-1092 protein_molecule denotes CD80
T32 1150-1154 protein_molecule denotes IL-2
T33 1188-1192 protein_molecule denotes CD28
T34 1229-1249 other_name denotes T cell proliferation
T35 1268-1272 protein_molecule denotes IL-2
T36 1295-1309 protein_family_or_group denotes soluble factor
T37 1325-1330 protein_molecule denotes NF-AT