PubMed:10438457 / 0-341
Annnotations
Inflammaging
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-101 | Sentence | denotes | Protein kinase C and calcineurin synergize to activate IkappaB kinase and NF-kappaB in T lymphocytes. |
| T2 | 102-250 | Sentence | denotes | The nuclear factor of kappaB (NF-kappaB) is a ubiquitous transcription factor that is key in the regulation of the immune response and inflammation. |
| T1 | 0-101 | Sentence | denotes | Protein kinase C and calcineurin synergize to activate IkappaB kinase and NF-kappaB in T lymphocytes. |
| T2 | 102-250 | Sentence | denotes | The nuclear factor of kappaB (NF-kappaB) is a ubiquitous transcription factor that is key in the regulation of the immune response and inflammation. |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-101 | Sentence | denotes | Protein kinase C and calcineurin synergize to activate IkappaB kinase and NF-kappaB in T lymphocytes. |
| T2 | 102-250 | Sentence | denotes | The nuclear factor of kappaB (NF-kappaB) is a ubiquitous transcription factor that is key in the regulation of the immune response and inflammation. |
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-16 | protein | denotes | Protein kinase C |
| T2 | 21-32 | protein | denotes | calcineurin |
| T3 | 55-69 | protein | denotes | IkappaB kinase |
| T4 | 74-83 | protein | denotes | NF-kappaB |
| T5 | 87-100 | cell_type | denotes | T lymphocytes |
| T6 | 132-141 | protein | denotes | NF-kappaB |
| T7 | 148-179 | protein | denotes | ubiquitous transcription factor |
| T8 | 251-266 | protein | denotes | T cell receptor |
| T9 | 268-271 | protein | denotes | TCR |
| T10 | 325-334 | protein | denotes | NF-kappaB |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 0-32 | NP | denotes | Protein kinase C and calcineurin |
| C2 | 55-69 | NP | denotes | IkappaB kinase |
| C3 | 74-83 | NP | denotes | NF-kappaB |
| C4 | 87-100 | NP | denotes | T lymphocytes |
| C5 | 102-142 | NP | denotes | The nuclear factor of kappaB (NF-kappaB) |
| C6 | 146-179 | NP | denotes | a ubiquitous transcription factor |
| C7 | 180-184 | NP | denotes | that |
| C9 | 325-334 | NP | denotes | NF-kappaB |
| C8 | 311-334 | NP | denotes | activation of NF-kappaB |
| C10 | 336-341 | NP | denotes | which |
| R1 | C5 | C3 | coref-ident | The nuclear factor of kappaB (NF-kappaB),NF-kappaB |
| R2 | C7 | C6 | coref-relat | that,a ubiquitous transcription factor |
| R3 | C9 | C5 | coref-ident | NF-kappaB,The nuclear factor of kappaB (NF-kappaB) |
| R4 | C10 | C8 | coref-relat | which,activation of NF-kappaB |
semrep-sample
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| E1-ti-1 | 0-16 | cui:C0033634 | denotes | Protein kinase C |
| E2-ti-1 | 21-32 | cui:C0054450 | denotes | calcineurin |
| E3-ti-1 | 55-69 | cui:C0663914 | denotes | IkappaB kinase |
| E4-ti-1 | 74-83 | cui:C0521447 | denotes | NF-kappaB |
| E5-ti-1 | 74-83 | cui:C1521761 | denotes | NF-kappaB |
| E6-ti-1 | 87-100 | cui:C0039194 | denotes | T lymphocytes |
| T1 | 46-54 | STIMULATES | denotes | activate |
| T2 | 46-54 | STIMULATES | denotes | activate |
| E1-ab-1 | 106-113 | cui:C0521447 | denotes | nuclear |
| E2-ab-1 | 114-120 | cui:C1521761 | denotes | factor |
| E3-ab-1 | 159-179 | cui:C0040648 | denotes | transcription factor |
| E4-ab-1 | 188-191 | cui:C1554080 | denotes | key |
| E5-ab-1 | 199-209 | cui:C0851285 | denotes | regulation |
| E6-ab-1 | 217-232 | cui:C0301872 | denotes | immune response |
| E7-ab-1 | 237-249 | cui:C0021368 | denotes | inflammation |
| T3 | 199-209 | AFFECTS | denotes | regulation |
| T4 | 199-209 | AFFECTS | denotes | regulation |
| E1-ab-2 | 251-266 | cui:C0034790 | denotes | T cell receptor |
| E2-ab-2 | 293-297 | cui:C0449719 | denotes | part |
| E3-ab-2 | 325-334 | cui:C0521447 | denotes | NF-kappaB |
| E4-ab-2 | 325-334 | cui:C1521761 | denotes | NF-kappaB |
| R1 | E2-ti-1 | T1 | subjectOf | calcineurin,activate |
| R2 | E3-ti-1 | T1 | objectOf | IkappaB kinase,activate |
| R3 | E1-ti-1 | T2 | subjectOf | Protein kinase C,activate |
| R4 | E3-ti-1 | T2 | objectOf | IkappaB kinase,activate |
| R5 | E3-ab-1 | T3 | subjectOf | transcription factor,regulation |
| R6 | E6-ab-1 | T3 | objectOf | immune response,regulation |
| R7 | E3-ab-1 | T4 | subjectOf | transcription factor,regulation |
| R8 | E7-ab-1 | T4 | objectOf | inflammation,regulation |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-101 | Sentence | denotes | Protein kinase C and calcineurin synergize to activate IkappaB kinase and NF-kappaB in T lymphocytes. |
| S2 | 102-250 | Sentence | denotes | The nuclear factor of kappaB (NF-kappaB) is a ubiquitous transcription factor that is key in the regulation of the immune response and inflammation. |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-16 | protein_molecule | denotes | Protein kinase C |
| T2 | 21-32 | protein_molecule | denotes | calcineurin |
| T3 | 55-69 | protein_molecule | denotes | IkappaB kinase |
| T4 | 74-83 | protein_complex | denotes | NF-kappaB |
| T5 | 87-100 | cell_type | denotes | T lymphocytes |
| T6 | 132-141 | protein_complex | denotes | NF-kappaB |
| T7 | 148-179 | protein_family_or_group | denotes | ubiquitous transcription factor |
| T8 | 217-232 | other_name | denotes | immune response |
| T9 | 237-249 | other_name | denotes | inflammation |
| T10 | 251-266 | protein_family_or_group | denotes | T cell receptor |
| T11 | 268-271 | protein_family_or_group | denotes | TCR |
| T12 | 325-334 | protein_complex | denotes | NF-kappaB |
metamap-sample
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 1-17 | C0033634 | denotes | rotein kinase C |
| T7 | 88-101 | C0039194 | denotes | lymphocytes. |
| T12 | 22-33 | C1149946 | denotes | alcineurin |
| T13 | 44-46 | C1883351 | denotes | o |
| T14 | 47-55 | C1515877 | denotes | ctivate |
| T16 | 326-335 | C1521761 | denotes | F-kappaB, |
| T17 | 115-121 | C1521761 | denotes | actor |
| T18 | 75-84 | C1521761 | denotes | F-kappaB |
| T20 | 326-335 | C0521447 | denotes | F-kappaB, |
| T21 | 107-114 | C0521447 | denotes | uclear |
| T22 | 75-84 | C0521447 | denotes | F-kappaB |
| T27 | 56-70 | C0754623 | denotes | kappaB kinase |
| T44 | 312-322 | C1879547 | denotes | ctivation |
| T50 | 238-250 | C0021368 | denotes | nflammation. |
| T51 | 160-179 | C0040648 | denotes | ranscription factor |
| T57 | 299-307 | C1514873 | denotes | equired |
| T62 | 274-287 | C0332220 | denotes | ross-linking |
| T65 | 294-298 | C1709471 | denotes | art |
mondo_disease
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 237-249 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 87-100 | Body_part | denotes | T lymphocytes | http://purl.obolibrary.org/obo/CL_0000084 |
| T2 | 251-257 | Body_part | denotes | T cell | http://purl.obolibrary.org/obo/CL_0000084 |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 87-100 | Cell | denotes | T lymphocytes | http://purl.obolibrary.org/obo/CL:0000084 |
| T2 | 251-257 | Cell | denotes | T cell | http://purl.obolibrary.org/obo/CL:0000084 |