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PubMed:10437913 JSONTXT

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PubmedHPO

Id Subject Object Predicate Lexical cue
T1 117-122 HP_0002664 denotes Tumor
T2 151-165 HP_0009919 denotes retinoblastoma

jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 51-56 protein denotes Oct-1
T2 91-104 protein denotes interleukin-8
T3 151-170 DNA denotes retinoblastoma gene
T4 200-218 DNA denotes HLA class II genes
T5 234-243 protein denotes IFN-gamma
T6 288-290 protein denotes Rb
T7 317-330 DNA denotes class II gene
T8 379-381 protein denotes Rb
T9 396-410 DNA denotes class II genes
T10 454-456 protein denotes Rb
T11 506-513 DNA denotes HLA-DRA
T12 519-542 DNA denotes prototype class II gene
T13 544-549 protein denotes Oct-1
T14 553-584 protein denotes POU domain transcription factor
T15 619-626 DNA denotes HLA-DRA
T16 652-670 cell_type denotes Rb-defective cells
T17 672-674 protein denotes Rb
T18 712-717 protein denotes Oct-1
T19 757-762 protein denotes Oct-1
T20 794-807 protein denotes interleukin 8
T21 861-866 protein denotes Oct-1
T22 895-920 cell_line denotes Rb-transformed cell lines
T23 922-935 protein denotes interleukin 8

genia-medco-coref

Id Subject Object Predicate Lexical cue
C14 91-115 NP denotes interleukin-8 expression
C1 196-218 NP denotes the HLA class II genes
C2 392-410 NP denotes the class II genes
C7 454-467 NP denotes Rb expression
C3 506-513 NP denotes HLA-DRA
C4 515-542 NP denotes the prototype class II gene
C5 544-549 NP denotes Oct-1
C6 551-584 NP denotes a POU domain transcription factor
C12 652-655 NP denotes Rb-
C8 672-685 NP denotes Rb expression
C9 712-717 NP denotes Oct-1
C10 734-737 NP denotes its
C11 757-762 NP denotes Oct-1
C13 895-898 NP denotes Rb-
C15 922-946 NP denotes interleukin 8 expression
R1 C2 C1 coref-ident the class II genes,the HLA class II genes
R2 C4 C3 coref-appos the prototype class II gene,HLA-DRA
R3 C6 C5 coref-appos a POU domain transcription factor,Oct-1
R4 C8 C7 coref-ident Rb expression,Rb expression
R5 C9 C5 coref-ident Oct-1,Oct-1
R6 C10 C8 coref-pron its,Rb expression
R7 C11 C9 coref-ident Oct-1,Oct-1
R8 C13 C12 coref-ident Rb-,Rb-
R9 C15 C14 coref-ident interleukin 8 expression,interleukin-8 expression

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-116 Sentence denotes Retinoblastoma protein expression leads to reduced Oct-1 DNA binding activity and enhances interleukin-8 expression.
S2 117-342 Sentence denotes Tumor cell lines with a defective retinoblastoma gene are unable to transcribe the HLA class II genes in response to IFN-gamma treatment, and reconstitution of functional Rb rescues IFN-gamma-induced class II gene expression.
S3 343-422 Sentence denotes However, the molecular mechanism of Rb rescue of the class II genes is unknown.
S4 423-543 Sentence denotes We have examined the effect of Rb expression on the activation of the promoter for HLA-DRA, the prototype class II gene.
S5 544-671 Sentence denotes Oct-1, a POU domain transcription factor, was identified as a repressor of HLA-DRA promoter activity in the Rb-defective cells.
S6 672-756 Sentence denotes Rb expression led to phosphorylation of Oct-1, thus relieving its repressive effect.
S7 757-826 Sentence denotes Oct-1 has also been shown to repress interleukin 8 promoter activity.
S8 827-977 Sentence denotes Consistent with reduced levels of Oct-1 DNA binding activity in the Rb-transformed cell lines, interleukin 8 expression is higher in these cell lines.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 51-56 protein_molecule denotes Oct-1
T2 91-104 protein_molecule denotes interleukin-8
T3 151-165 other_name denotes retinoblastoma
T4 200-218 DNA_family_or_group denotes HLA class II genes
T5 234-243 protein_molecule denotes IFN-gamma
T6 288-290 protein_molecule denotes Rb
T7 299-316 other_name denotes IFN-gamma-induced
T8 317-330 DNA_family_or_group denotes class II gene
T9 379-381 protein_molecule denotes Rb
T10 396-410 DNA_family_or_group denotes class II genes
T11 454-456 protein_molecule denotes Rb
T12 506-513 DNA_domain_or_region denotes HLA-DRA
T13 519-542 DNA_domain_or_region denotes prototype class II gene
T14 544-549 protein_molecule denotes Oct-1
T15 553-584 protein_family_or_group denotes POU domain transcription factor
T16 619-626 DNA_domain_or_region denotes HLA-DRA
T17 652-670 cell_type denotes Rb-defective cells
T18 672-674 protein_molecule denotes Rb
T19 712-717 protein_molecule denotes Oct-1
T20 757-762 protein_molecule denotes Oct-1
T21 794-807 protein_molecule denotes interleukin 8
T22 861-866 protein_molecule denotes Oct-1
T23 895-920 cell_line denotes Rb-transformed cell lines
T24 922-935 protein_molecule denotes interleukin 8