> top > docs > PubMed:10402173 > annotations

PubMed:10402173 JSONTXT

Annnotations TAB JSON ListView MergeView

PMID_GLOBAL

Id Subject Object Predicate Lexical cue mondo_id
T1 86-107 DiseaseOrPhenotypicFeature denotes renal cell carcinomas 0005086|0005549
T3 142-162 DiseaseOrPhenotypicFeature denotes renal cell carcinoma 0005086|0005549
T5 164-167 DiseaseOrPhenotypicFeature denotes RCC 0005086|0005549|0007763|0044874
T9 329-332 DiseaseOrPhenotypicFeature denotes RCC 0005086|0005549|0007763|0044874
T13 387-390 DiseaseOrPhenotypicFeature denotes RCC 0005086|0005549|0007763|0044874
T17 401-404 DiseaseOrPhenotypicFeature denotes RCC 0005086|0005549|0007763|0044874
T21 568-571 DiseaseOrPhenotypicFeature denotes RCC 0005086|0005549|0007763|0044874
T25 933-936 DiseaseOrPhenotypicFeature denotes RCC 0005086|0005549|0007763|0044874
T29 947-950 DiseaseOrPhenotypicFeature denotes RCC 0005086|0005549|0007763|0044874
T33 1148-1151 DiseaseOrPhenotypicFeature denotes RCC 0005086|0005549|0007763|0044874
T37 1154-1157 DiseaseOrPhenotypicFeature denotes can 0012833
T38 1266-1269 DiseaseOrPhenotypicFeature denotes RCC 0005086|0005549|0007763|0044874
T42 1325-1328 DiseaseOrPhenotypicFeature denotes RCC 0005086|0005549|0007763|0044874

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 142-162 HP_0005584 denotes renal cell carcinoma

jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 15-24 protein denotes NF-kappaB
T2 39-53 cell_type denotes normal T cells
T3 109-122 cell_type denotes T lymphocytes
T4 229-249 protein denotes transcription factor
T5 251-260 protein denotes NF-kappaB
T6 293-302 protein denotes NF-kappaB
T7 318-325 cell_type denotes T cells
T8 438-447 protein denotes NF-kappaB
T9 463-477 cell_type denotes normal T cells
T10 506-513 cell_type denotes T cells
T11 530-536 protein denotes kappaB
T12 557-564 cell_type denotes T cells
T13 620-627 cell_type denotes T cells
T14 696-710 protein denotes RelA/NFkappaB1
T15 760-766 protein denotes kappaB
T16 835-847 protein denotes IkappaBalpha
T17 920-927 cell_type denotes T cells
T18 993-997 protein denotes RelA
T19 1002-1012 protein denotes NF-kappaB1
T20 1089-1122 protein denotes RelA/NF-kappaB1 binding complexes
T21 1168-1182 cell_type denotes normal T cells
T22 1214-1223 protein denotes NF-kappaB
T23 1255-1262 cell_type denotes T cells
T24 1300-1309 protein denotes NF-kappaB

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 39-53 NP denotes normal T cells
C2 80-107 NP denotes human renal cell carcinomas
C5 142-168 NP denotes renal cell carcinoma (RCC)
C4 128-168 NP denotes patients with renal cell carcinoma (RCC)
C3 109-168 NP denotes T lymphocytes from patients with renal cell carcinoma (RCC)
C7 225-249 NP denotes the transcription factor
C8 251-260 NP denotes NF-kappaB
C6 202-260 NP denotes impaired activation of the transcription factor, NF-kappaB
C9 293-314 NP denotes NF-kappaB suppression
C11 329-340 NP denotes RCC patient
C10 318-340 NP denotes T cells of RCC patient
C12 387-407 NP denotes RCC explants (RCC-S)
C13 438-459 NP denotes NF-kappaB suppression
C14 463-477 NP denotes normal T cells
C15 478-482 NP denotes that
C16 498-513 NP denotes patient T cells
C18 530-553 NP denotes kappaB-binding activity
C17 515-553 NP denotes The pattern of kappaB-binding activity
C20 568-579 NP denotes RCC patient
C19 557-579 NP denotes T cells of RCC patient
C21 607-611 NP denotes that
C22 760-783 NP denotes kappaB-binding activity
C23 933-945 NP denotes RCC patients
C24 947-952 NP denotes RCC-S
C25 1030-1035 NP denotes their
C26 1148-1153 NP denotes RCC-S
C27 1168-1182 NP denotes normal T cells
C29 1205-1234 NP denotes impaired NF-kappaB activation
C28 1183-1234 NP denotes the same phenotype of impaired NF-kappaB activation
C30 1235-1239 NP denotes that
C32 1266-1277 NP denotes RCC patient
C31 1255-1277 NP denotes T cells of RCC patient
C33 1300-1321 NP denotes NF-kappaB suppression
C34 1325-1330 NP denotes RCC-S
R1 C5 C2 coref-ident renal cell carcinoma (RCC),human renal cell carcinomas
R2 C8 C7 coref-appos NF-kappaB,the transcription factor
R3 C11 C4 coref-ident RCC patient,patients with renal cell carcinoma (RCC)
R4 C10 C3 coref-ident T cells of RCC patient,T lymphocytes from patients with renal cell carcinoma (RCC)
R5 C13 C9 coref-ident NF-kappaB suppression,NF-kappaB suppression
R6 C15 C14 coref-relat that,normal T cells
R7 C16 C10 coref-ident patient T cells,T cells of RCC patient
R8 C20 C11 coref-ident RCC patient,RCC patient
R9 C19 C16 coref-ident T cells of RCC patient,patient T cells
R10 C21 C17 coref-pron that,The pattern of kappaB-binding activity
R11 C22 C18 coref-ident kappaB-binding activity,kappaB-binding activity
R12 C23 C20 coref-ident RCC patients,RCC patient
R13 C24 C12 coref-ident RCC-S,RCC explants (RCC-S)
R14 C25 C24 coref-pron their,RCC-S
R15 C26 C24 coref-ident RCC-S,RCC-S
R16 C27 C1 coref-ident normal T cells,normal T cells
R17 C29 C6 coref-ident impaired NF-kappaB activation,"impaired activation of the transcription factor, NF-kappaB"
R18 C30 C28 coref-relat that,the same phenotype of impaired NF-kappaB activation
R19 C32 C23 coref-ident RCC patient,RCC patients
R20 C31 C19 coref-ident T cells of RCC patient,T cells of RCC patient
R21 C33 C13 coref-ident NF-kappaB suppression,NF-kappaB suppression
R22 C34 C26 coref-ident RCC-S,RCC-S

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-108 Sentence denotes Suppression of NF-kappaB activation in normal T cells by supernatant fluid from human renal cell carcinomas.
S2 109-261 Sentence denotes T lymphocytes from patients with renal cell carcinoma (RCC) show reduced immune function and impaired activation of the transcription factor, NF-kappaB.
S3 262-514 Sentence denotes We determined the mechanism of NF-kappaB suppression in T cells of RCC patient and determined whether supernatant fluid from RCC explants (RCC-S) induced the same phenotype of NF-kappaB suppression in normal T cells that is observed in patient T cells.
S4 515-660 Sentence denotes The pattern of kappaB-binding activity in T cells of RCC patient was altered as compared to that seen in T cells obtained from normal volunteers.
S5 661-834 Sentence denotes In some patients, no activation of RelA/NFkappaB1-binding activity was detectable, while in others kappaB-binding activity was modestly induced but the duration was reduced.
S6 835-946 Sentence denotes IkappaBalpha was degraded normally following stimulation in both normal controls and T cells from RCC patients.
S7 947-1123 Sentence denotes RCC-S did not alter the cytoplasmic levels of RelA and NF-kappaB1 but did suppress their nuclear localization and inhibited the activation of RelA/NF-kappaB1 binding complexes.
S8 1124-1278 Sentence denotes These results show that RCC-S can induce in normal T cells the same phenotype of impaired NF-kappaB activation that is detected in T cells of RCC patient.
S9 1279-1388 Sentence denotes It also appears that NF-kappaB suppression by RCC-S may contribute to the immunosuppression of host immunity.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 15-24 protein_molecule denotes NF-kappaB
T2 39-53 cell_type denotes normal T cells
T3 57-74 other_name denotes supernatant fluid
T4 80-107 other_name denotes human renal cell carcinomas
T5 109-122 cell_type denotes T lymphocytes
T6 142-162 other_name denotes renal cell carcinoma
T7 164-167 other_name denotes RCC
T8 182-197 other_name denotes immune function
T9 229-249 protein_family_or_group denotes transcription factor
T10 251-260 protein_molecule denotes NF-kappaB
T11 293-302 protein_molecule denotes NF-kappaB
T12 318-325 cell_type denotes T cells
T13 329-332 other_name denotes RCC
T14 387-390 other_name denotes RCC
T15 401-404 other_name denotes RCC
T16 438-447 protein_molecule denotes NF-kappaB
T17 463-469 cell_type denotes normal
T18 470-477 cell_type denotes T cells
T19 506-513 cell_type denotes T cells
T20 530-536 protein_molecule denotes kappaB
T21 557-564 cell_type denotes T cells
T22 568-571 other_name denotes RCC
T23 620-627 cell_type denotes T cells
T24 696-710 protein_complex denotes RelA/NFkappaB1
T25 760-766 protein_molecule denotes kappaB
T26 835-847 protein_molecule denotes IkappaBalpha
T27 920-927 cell_type denotes T cells
T28 933-936 other_name denotes RCC
T29 947-950 other_name denotes RCC
T30 993-997 protein_subunit denotes RelA
T31 1002-1012 protein_molecule denotes NF-kappaB1
T32 1036-1056 other_name denotes nuclear localization
T33 1089-1093 protein_subunit denotes RelA
T34 1093-1104 protein_molecule denotes /NF-kappaB1
T35 1148-1151 other_name denotes RCC
T36 1168-1174 cell_type denotes normal
T37 1175-1182 cell_type denotes T cells
T38 1214-1223 protein_molecule denotes NF-kappaB
T39 1255-1262 cell_type denotes T cells
T40 1266-1269 other_name denotes RCC
T41 1300-1309 protein_molecule denotes NF-kappaB
T42 1325-1328 other_name denotes RCC
T43 1353-1370 other_name denotes immunosuppression
T44 1374-1387 other_name denotes host immunity