
PubMed:10359894
Annnotations
Inflammaging
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-97 | Sentence | denotes | Effects of diesel organic extracts on chemokine production by peripheral blood mononuclear cells. |
T2 | 98-109 | Sentence | denotes | BACKGROUND: |
T3 | 110-236 | Sentence | denotes | Polyaromatic hydrocarbons (PAHs) associated with diesel exhaust particles (DEPs) are found in the atmospheric urban pollution. |
T4 | 237-348 | Sentence | denotes | Such compounds have been shown to favor IgE production, bronchial hyperresponsiveness, and airway inflammation. |
T5 | 349-447 | Sentence | denotes | Chemokines are a group of chemotactic cytokines involved in the recruitment of inflammatory cells. |
T6 | 448-458 | Sentence | denotes | OBJECTIVE: |
T7 | 459-600 | Sentence | denotes | We investigated the effect of DEP-PAHs on the release and mRNA expression of IL-8, MCP-1, and RANTES by PBMCs obtained from healthy subjects. |
T8 | 601-609 | Sentence | denotes | METHODS: |
T9 | 610-729 | Sentence | denotes | Protein production in supernatants was assessed by ELISA, and mRNA expression was evaluated by semiquantitative RT-PCR. |
T10 | 730-738 | Sentence | denotes | RESULTS: |
T11 | 739-876 | Sentence | denotes | Secretion of IL-8 and RANTES increased in a dose-dependent manner with increasing concentrations of DEP-PAHs (range, 0.5 ng to 50 ng/mL). |
T12 | 877-976 | Sentence | denotes | On the contrary, the release of MCP-1 was significantly inhibited, also in a dose-dependent manner. |
T13 | 977-1112 | Sentence | denotes | Messenger RNA production coding for IL-8, RANTES, and MCP-1 showed parallel variations to the production of the correspondent proteins. |
T14 | 1113-1258 | Sentence | denotes | Effects of DEP-PAHs became significant at 7 hours and up to 48 hours time culture for MCP-1, and up to 24 hours time culture for IL-8 and RANTES. |
T15 | 1259-1553 | Sentence | denotes | Moreover, supernatants from DEP-PAH-activated cells, compared with those of controls, exhibited a significantly enhanced chemotactic activity for neutrophils and eosinophils, which was significantly inhibited by pretreatment with anti-IL-8 and anti-RANTES neutralizing antibodies, respectively. |
T16 | 1554-1565 | Sentence | denotes | CONCLUSION: |
T17 | 1566-1786 | Sentence | denotes | These findings suggest that the chemokine pathways are modulated by DEP-PAHs at the transcriptional level, reinforcing the idea that the development of inflammatory reactions might be affected by diesel exhaust emission. |
T1 | 0-97 | Sentence | denotes | Effects of diesel organic extracts on chemokine production by peripheral blood mononuclear cells. |
T2 | 98-109 | Sentence | denotes | BACKGROUND: |
T3 | 110-236 | Sentence | denotes | Polyaromatic hydrocarbons (PAHs) associated with diesel exhaust particles (DEPs) are found in the atmospheric urban pollution. |
T4 | 237-348 | Sentence | denotes | Such compounds have been shown to favor IgE production, bronchial hyperresponsiveness, and airway inflammation. |
T5 | 349-447 | Sentence | denotes | Chemokines are a group of chemotactic cytokines involved in the recruitment of inflammatory cells. |
T6 | 448-458 | Sentence | denotes | OBJECTIVE: |
T7 | 459-600 | Sentence | denotes | We investigated the effect of DEP-PAHs on the release and mRNA expression of IL-8, MCP-1, and RANTES by PBMCs obtained from healthy subjects. |
T8 | 601-609 | Sentence | denotes | METHODS: |
T9 | 610-729 | Sentence | denotes | Protein production in supernatants was assessed by ELISA, and mRNA expression was evaluated by semiquantitative RT-PCR. |
T10 | 730-738 | Sentence | denotes | RESULTS: |
T11 | 739-876 | Sentence | denotes | Secretion of IL-8 and RANTES increased in a dose-dependent manner with increasing concentrations of DEP-PAHs (range, 0.5 ng to 50 ng/mL). |
T12 | 877-976 | Sentence | denotes | On the contrary, the release of MCP-1 was significantly inhibited, also in a dose-dependent manner. |
T13 | 977-1112 | Sentence | denotes | Messenger RNA production coding for IL-8, RANTES, and MCP-1 showed parallel variations to the production of the correspondent proteins. |
T14 | 1113-1258 | Sentence | denotes | Effects of DEP-PAHs became significant at 7 hours and up to 48 hours time culture for MCP-1, and up to 24 hours time culture for IL-8 and RANTES. |
T15 | 1259-1553 | Sentence | denotes | Moreover, supernatants from DEP-PAH-activated cells, compared with those of controls, exhibited a significantly enhanced chemotactic activity for neutrophils and eosinophils, which was significantly inhibited by pretreatment with anti-IL-8 and anti-RANTES neutralizing antibodies, respectively. |
T16 | 1554-1565 | Sentence | denotes | CONCLUSION: |
T17 | 1566-1786 | Sentence | denotes | These findings suggest that the chemokine pathways are modulated by DEP-PAHs at the transcriptional level, reinforcing the idea that the development of inflammatory reactions might be affected by diesel exhaust emission. |
jnlpba-st-training
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 38-47 | protein | denotes | chemokine |
T2 | 62-96 | cell_type | denotes | peripheral blood mononuclear cells |
T3 | 277-280 | protein | denotes | IgE |
T4 | 375-396 | protein | denotes | chemotactic cytokines |
T5 | 428-446 | cell_type | denotes | inflammatory cells |
T6 | 517-521 | RNA | denotes | mRNA |
T7 | 536-540 | protein | denotes | IL-8 |
T8 | 542-547 | protein | denotes | MCP-1 |
T9 | 553-559 | protein | denotes | RANTES |
T10 | 563-568 | cell_type | denotes | PBMCs |
T11 | 672-676 | RNA | denotes | mRNA |
T12 | 752-756 | protein | denotes | IL-8 |
T13 | 761-767 | protein | denotes | RANTES |
T14 | 909-914 | protein | denotes | MCP-1 |
T15 | 977-990 | RNA | denotes | Messenger RNA |
T16 | 1013-1017 | protein | denotes | IL-8 |
T17 | 1019-1025 | protein | denotes | RANTES |
T18 | 1031-1036 | protein | denotes | MCP-1 |
T19 | 1089-1111 | protein | denotes | correspondent proteins |
T20 | 1199-1204 | protein | denotes | MCP-1 |
T21 | 1242-1246 | protein | denotes | IL-8 |
T22 | 1251-1257 | protein | denotes | RANTES |
T23 | 1287-1310 | cell_type | denotes | DEP-PAH-activated cells |
T24 | 1405-1416 | cell_type | denotes | neutrophils |
T25 | 1421-1432 | cell_type | denotes | eosinophils |
T26 | 1489-1498 | protein | denotes | anti-IL-8 |
T27 | 1503-1514 | protein | denotes | anti-RANTES |
T28 | 1598-1607 | protein | denotes | chemokine |
pubmed-sentences-benchmark
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
S1 | 0-97 | Sentence | denotes | Effects of diesel organic extracts on chemokine production by peripheral blood mononuclear cells. |
S2 | 98-236 | Sentence | denotes | BACKGROUND: Polyaromatic hydrocarbons (PAHs) associated with diesel exhaust particles (DEPs) are found in the atmospheric urban pollution. |
S3 | 237-348 | Sentence | denotes | Such compounds have been shown to favor IgE production, bronchial hyperresponsiveness, and airway inflammation. |
S4 | 349-447 | Sentence | denotes | Chemokines are a group of chemotactic cytokines involved in the recruitment of inflammatory cells. |
S5 | 448-600 | Sentence | denotes | OBJECTIVE: We investigated the effect of DEP-PAHs on the release and mRNA expression of IL-8, MCP-1, and RANTES by PBMCs obtained from healthy subjects. |
S6 | 601-729 | Sentence | denotes | METHODS: Protein production in supernatants was assessed by ELISA, and mRNA expression was evaluated by semiquantitative RT-PCR. |
S7 | 730-876 | Sentence | denotes | RESULTS: Secretion of IL-8 and RANTES increased in a dose-dependent manner with increasing concentrations of DEP-PAHs (range, 0.5 ng to 50 ng/mL). |
S8 | 877-976 | Sentence | denotes | On the contrary, the release of MCP-1 was significantly inhibited, also in a dose-dependent manner. |
S9 | 977-1112 | Sentence | denotes | Messenger RNA production coding for IL-8, RANTES, and MCP-1 showed parallel variations to the production of the correspondent proteins. |
S10 | 1113-1258 | Sentence | denotes | Effects of DEP-PAHs became significant at 7 hours and up to 48 hours time culture for MCP-1, and up to 24 hours time culture for IL-8 and RANTES. |
S11 | 1259-1553 | Sentence | denotes | Moreover, supernatants from DEP-PAH-activated cells, compared with those of controls, exhibited a significantly enhanced chemotactic activity for neutrophils and eosinophils, which was significantly inhibited by pretreatment with anti-IL-8 and anti-RANTES neutralizing antibodies, respectively. |
S12 | 1554-1786 | Sentence | denotes | CONCLUSION: These findings suggest that the chemokine pathways are modulated by DEP-PAHs at the transcriptional level, reinforcing the idea that the development of inflammatory reactions might be affected by diesel exhaust emission. |
genia-medco-coref
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
C1 | 110-190 | NP | denotes | Polyaromatic hydrocarbons (PAHs) associated with diesel exhaust particles (DEPs) |
C2 | 237-251 | NP | denotes | Such compounds |
C3 | 489-497 | NP | denotes | DEP-PAHs |
C5 | 536-540 | NP | denotes | IL-8 |
C6 | 542-547 | NP | denotes | MCP-1 |
C7 | 553-559 | NP | denotes | RANTES |
C4 | 536-559 | NP | denotes | IL-8, MCP-1, and RANTES |
C9 | 752-756 | NP | denotes | IL-8 |
C10 | 761-767 | NP | denotes | RANTES |
C8 | 752-767 | NP | denotes | IL-8 and RANTES |
C11 | 781-804 | NP | denotes | a dose-dependent manner |
C12 | 839-847 | NP | denotes | DEP-PAHs |
C13 | 909-914 | NP | denotes | MCP-1 |
C14 | 952-975 | NP | denotes | a dose-dependent manner |
C16 | 1013-1017 | NP | denotes | IL-8 |
C17 | 1019-1025 | NP | denotes | RANTES |
C18 | 1031-1036 | NP | denotes | MCP-1 |
C15 | 1013-1036 | NP | denotes | IL-8, RANTES, and MCP-1 |
C19 | 1124-1132 | NP | denotes | DEP-PAHs |
C20 | 1199-1204 | NP | denotes | MCP-1 |
C22 | 1242-1246 | NP | denotes | IL-8 |
C23 | 1251-1257 | NP | denotes | RANTES |
C21 | 1242-1257 | NP | denotes | IL-8 and RANTES |
C24 | 1269-1281 | NP | denotes | supernatants |
C25 | 1326-1331 | NP | denotes | those |
C26 | 1355-1432 | NP | denotes | a significantly enhanced chemotactic activity for neutrophils and eosinophils |
C27 | 1434-1439 | NP | denotes | which |
C28 | 1634-1642 | NP | denotes | DEP-PAHs |
C29 | 1685-1693 | NP | denotes | the idea |
C30 | 1694-1698 | NP | denotes | that |
R1 | C2 | C1 | coref-ident | Such compounds,Polyaromatic hydrocarbons (PAHs) associated with diesel exhaust particles (DEPs) |
R2 | C3 | C2 | coref-ident | DEP-PAHs,Such compounds |
R3 | C9 | C5 | coref-ident | IL-8,IL-8 |
R4 | C10 | C7 | coref-ident | RANTES,RANTES |
R5 | C12 | C3 | coref-ident | DEP-PAHs,DEP-PAHs |
R6 | C13 | C6 | coref-ident | MCP-1,MCP-1 |
R7 | C14 | C11 | coref-ident | a dose-dependent manner,a dose-dependent manner |
R8 | C16 | C9 | coref-ident | IL-8,IL-8 |
R9 | C17 | C10 | coref-ident | RANTES,RANTES |
R10 | C18 | C13 | coref-ident | MCP-1,MCP-1 |
R11 | C15 | C4 | coref-ident | "IL-8, RANTES, and MCP-1","IL-8, MCP-1, and RANTES" |
R12 | C19 | C12 | coref-ident | DEP-PAHs,DEP-PAHs |
R13 | C20 | C18 | coref-ident | MCP-1,MCP-1 |
R14 | C22 | C16 | coref-ident | IL-8,IL-8 |
R15 | C23 | C17 | coref-ident | RANTES,RANTES |
R16 | C21 | C8 | coref-ident | IL-8 and RANTES,IL-8 and RANTES |
R17 | C25 | C24 | coref-pron | those,supernatants |
R18 | C27 | C26 | coref-relat | which,a significantly enhanced chemotactic activity for neutrophils and eosinophils |
R19 | C28 | C19 | coref-ident | DEP-PAHs,DEP-PAHs |
R20 | C30 | C29 | coref-relat | that,the idea |
GENIAcorpus
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 11-34 | other_organic_compound | denotes | diesel organic extracts |
T2 | 38-47 | protein_family_or_group | denotes | chemokine |
T3 | 62-96 | cell_type | denotes | peripheral blood mononuclear cells |
T4 | 110-135 | other_organic_compound | denotes | Polyaromatic hydrocarbons |
T5 | 137-141 | other_organic_compound | denotes | PAHs |
T6 | 159-183 | other_organic_compound | denotes | diesel exhaust particles |
T7 | 185-189 | other_organic_compound | denotes | DEPs |
T8 | 208-235 | other_organic_compound | denotes | atmospheric urban pollution |
T9 | 277-280 | protein_family_or_group | denotes | IgE |
T10 | 293-322 | other_name | denotes | bronchial hyperresponsiveness |
T11 | 328-347 | other_name | denotes | airway inflammation |
T12 | 375-396 | protein_family_or_group | denotes | chemotactic cytokines |
T13 | 428-446 | cell_type | denotes | inflammatory cells |
T14 | 489-493 | other_organic_compound | denotes | DEP- |
T15 | 493-497 | other_organic_compound | denotes | PAHs |
T16 | 517-521 | RNA_family_or_group | denotes | mRNA |
T17 | 536-540 | protein_molecule | denotes | IL-8 |
T18 | 542-547 | protein_molecule | denotes | MCP-1 |
T19 | 553-559 | protein_molecule | denotes | RANTES |
T20 | 563-568 | cell_type | denotes | PBMCs |
T21 | 583-599 | multi_cell | denotes | healthy subjects |
T22 | 610-628 | other_name | denotes | Protein production |
T23 | 661-666 | other_name | denotes | ELISA |
T24 | 672-676 | RNA_family_or_group | denotes | mRNA |
T25 | 725-728 | other_name | denotes | PCR |
T26 | 752-756 | protein_molecule | denotes | IL-8 |
T27 | 761-767 | protein_molecule | denotes | RANTES |
T28 | 783-804 | other_name | denotes | dose-dependent manner |
T29 | 839-843 | other_organic_compound | denotes | DEP- |
T30 | 843-847 | other_organic_compound | denotes | PAHs |
T31 | 909-914 | protein_molecule | denotes | MCP-1 |
T32 | 954-975 | other_name | denotes | dose-dependent manner |
T33 | 977-990 | RNA_family_or_group | denotes | Messenger RNA |
T34 | 1013-1017 | protein_molecule | denotes | IL-8 |
T35 | 1019-1025 | protein_molecule | denotes | RANTES |
T36 | 1031-1036 | protein_molecule | denotes | MCP-1 |
T37 | 1089-1111 | protein_family_or_group | denotes | correspondent proteins |
T38 | 1128-1132 | other_organic_compound | denotes | PAHs |
T39 | 1199-1204 | protein_molecule | denotes | MCP-1 |
T40 | 1242-1246 | protein_molecule | denotes | IL-8 |
T41 | 1251-1257 | protein_molecule | denotes | RANTES |
T42 | 1287-1310 | cell_type | denotes | DEP-PAH-activated cells |
T43 | 1380-1400 | other_name | denotes | chemotactic activity |
T44 | 1405-1416 | cell_type | denotes | neutrophils |
T45 | 1421-1432 | cell_type | denotes | eosinophils |
T46 | 1489-1494 | protein_family_or_group | denotes | anti- |
T47 | 1494-1498 | protein_molecule | denotes | IL-8 |
T48 | 1503-1508 | protein_family_or_group | denotes | anti- |
T49 | 1508-1514 | protein_molecule | denotes | RANTES |
T50 | 1598-1607 | protein_family_or_group | denotes | chemokine |
T51 | 1638-1642 | other_organic_compound | denotes | PAHs |
T52 | 1650-1671 | other_name | denotes | transcriptional level |
T53 | 1718-1740 | other_name | denotes | inflammatory reactions |
T54 | 1762-1785 | other_name | denotes | diesel exhaust emission |