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PubMed:10357820 JSONTXT

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PubMed_ArguminSci

Id Subject Object Predicate Lexical cue
T1 83-210 DRI_Approach denotes Here we show that the lymphoid lineage-determining factors Ikaros and Aiolos can function as strong transcriptional repressors.
T2 211-325 DRI_Background denotes This function is mediated through two repression domains and is dependent upon the promoter context and cell type.
T3 326-474 DRI_Background denotes Repression by Ikaros proteins correlates with hypo-acetylation of core histones at promoter sites and is relieved by histone deacetylase inhibitors.
T4 475-649 DRI_Outcome denotes Consistent with these findings, Ikaros and its repression domains can interact in vivo and in vitro with the mSin3 family of co-repressors which bind to histone deacetylases.
T5 650-903 DRI_Approach denotes Based on these and our recent findings of associations between Ikaros and Mi-2-HDAC, we propose that Ikaros family members modulate gene expression during lymphocyte development by recruiting distinct histone deacetylase complexes to specific promoters.

PMID_GLOBAL

Id Subject Object Predicate Lexical cue mondo_id
T1 160-163 DiseaseOrPhenotypicFeature denotes can 0012833
T2 541-544 DiseaseOrPhenotypicFeature denotes can 0012833

jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 14-20 protein denotes Ikaros
T2 25-31 protein denotes Aiolos
T3 52-81 protein denotes histone deacetylase complexes
T4 105-141 protein denotes lymphoid lineage-determining factors
T5 142-148 protein denotes Ikaros
T6 153-159 protein denotes Aiolos
T7 176-209 protein denotes strong transcriptional repressors
T8 249-267 protein denotes repression domains
T9 340-355 protein denotes Ikaros proteins
T10 392-405 protein denotes core histones
T11 409-423 DNA denotes promoter sites
T12 443-462 protein denotes histone deacetylase
T13 507-513 protein denotes Ikaros
T14 522-540 protein denotes repression domains
T15 584-596 protein denotes mSin3 family
T16 628-648 protein denotes histone deacetylases
T17 713-719 protein denotes Ikaros
T18 724-733 protein denotes Mi-2-HDAC
T19 751-772 protein denotes Ikaros family members
T20 851-880 protein denotes histone deacetylase complexes
T21 884-902 DNA denotes specific promoters

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-82 Sentence denotes Repression by Ikaros and Aiolos is mediated through histone deacetylase complexes.
S2 83-210 Sentence denotes Here we show that the lymphoid lineage-determining factors Ikaros and Aiolos can function as strong transcriptional repressors.
S3 211-325 Sentence denotes This function is mediated through two repression domains and is dependent upon the promoter context and cell type.
S4 326-474 Sentence denotes Repression by Ikaros proteins correlates with hypo-acetylation of core histones at promoter sites and is relieved by histone deacetylase inhibitors.
S5 475-649 Sentence denotes Consistent with these findings, Ikaros and its repression domains can interact in vivo and in vitro with the mSin3 family of co-repressors which bind to histone deacetylases.
S6 650-903 Sentence denotes Based on these and our recent findings of associations between Ikaros and Mi-2-HDAC, we propose that Ikaros family members modulate gene expression during lymphocyte development by recruiting distinct histone deacetylase complexes to specific promoters.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C2 14-20 NP denotes Ikaros
C1 14-31 NP denotes Ikaros and Aiolos
C3 101-159 NP denotes the lymphoid lineage-determining factors Ikaros and Aiolos
C4 340-355 NP denotes Ikaros proteins
C5 518-521 NP denotes its
C6 580-613 NP denotes the mSin3 family of co-repressors
C7 614-619 NP denotes which
C8 713-719 NP denotes Ikaros
R1 C3 C1 coref-ident the lymphoid lineage-determining factors Ikaros and Aiolos,Ikaros and Aiolos
R2 C4 C2 coref-ident Ikaros proteins,Ikaros
R3 C5 C4 coref-pron its,Ikaros proteins
R4 C7 C6 coref-relat which,the mSin3 family of co-repressors
R5 C8 C4 coref-ident Ikaros,Ikaros proteins

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 14-20 protein_molecule denotes Ikaros
T2 25-31 protein_molecule denotes Aiolos
T3 52-81 protein_complex denotes histone deacetylase complexes
T4 105-141 protein_family_or_group denotes lymphoid lineage-determining factors
T5 142-148 protein_molecule denotes Ikaros
T6 153-159 protein_molecule denotes Aiolos
T7 176-209 protein_family_or_group denotes strong transcriptional repressors
T8 249-267 protein_family_or_group denotes repression domains
T9 294-310 other_name denotes promoter context
T10 315-324 other_name denotes cell type
T11 340-346 protein_molecule denotes Ikaros
T12 392-405 protein_family_or_group denotes core histones
T13 409-423 DNA_domain_or_region denotes promoter sites
T14 443-462 protein_molecule denotes histone deacetylase
T15 507-513 protein_molecule denotes Ikaros
T16 522-540 protein_domain_or_region denotes repression domains
T17 584-596 protein_family_or_group denotes mSin3 family
T18 628-648 protein_family_or_group denotes histone deacetylases
T19 713-719 protein_molecule denotes Ikaros
T20 724-733 protein_molecule denotes Mi-2-HDAC
T21 751-757 protein_molecule denotes Ikaros
T22 782-797 other_name denotes gene expression
T23 805-827 other_name denotes lymphocyte development
T24 851-870 protein_molecule denotes histone deacetylase
T25 884-902 DNA_domain_or_region denotes specific promoters