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PubMed:10330396 JSONTXT

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PMID_GLOBAL

Id Subject Object Predicate Lexical cue mondo_id
T1 245-248 DiseaseOrPhenotypicFeature denotes can 0012833
T2 683-686 DiseaseOrPhenotypicFeature denotes NPC 0011775|0015459|0018982
T5 1159-1162 DiseaseOrPhenotypicFeature denotes NPC 0011775|0015459|0018982
T8 1295-1298 DiseaseOrPhenotypicFeature denotes NPC 0011775|0015459|0018982
T11 1405-1408 DiseaseOrPhenotypicFeature denotes NPC 0011775|0015459|0018982

jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 11-17 protein denotes RanBP1
T2 36-40 protein denotes CRM1
T3 50-70 protein denotes nuclear pore complex
T4 181-206 protein denotes transcription factor NFAT
T5 208-243 protein denotes nuclear factor of activated T cells
T6 298-304 protein denotes GTPase
T7 305-308 protein denotes Ran
T8 341-345 protein denotes CRM1
T9 433-452 cell_line denotes permeabilized cells
T10 460-470 protein denotes Ran mutant
T11 498-505 protein denotes RanQ69L
T12 525-529 protein denotes NFAT
T13 542-546 protein denotes CRM1
T14 551-554 protein denotes Ran
T15 573-580 protein denotes RanQ69L
T16 620-624 protein denotes CRM1
T17 661-681 protein denotes nuclear pore complex
T18 683-686 protein denotes NPC
T19 712-723 protein denotes p62 complex
T20 740-743 protein denotes Ran
T21 772-776 protein denotes CRM1
T22 788-800 protein denotes nucleoporins
T23 893-899 protein denotes RanBP1
T24 934-941 protein denotes RanQ69L
T25 1037-1044 protein denotes RanQ69L
T26 1046-1052 protein denotes RanBP1
T27 1064-1083 protein denotes Ran-binding domains
T28 1091-1114 protein denotes cytoplasmic nucleoporin
T29 1115-1121 protein denotes RanBP2
T30 1145-1149 protein denotes CRM1
T31 1159-1162 protein denotes NPC
T32 1206-1209 protein denotes Ran
T33 1295-1298 protein denotes NPC
T34 1308-1314 protein denotes RanBP1
T35 1328-1334 protein denotes RanBP2
T36 1371-1395 protein denotes nuclear export complexes
T37 1405-1408 protein denotes NPC

FSU-PRGE

Id Subject Object Predicate Lexical cue
T1 11-17 protein denotes RanBP1
T2 36-40 protein denotes CRM1
T3 181-201 protein denotes transcription factor
T4 202-206 protein denotes NFAT
T5 208-243 protein denotes nuclear factor of activated T cells
T6 298-304 protein denotes GTPase
T7 305-308 protein denotes Ran
T8 341-345 protein denotes CRM1
T9 460-463 protein denotes Ran
T10 498-505 protein denotes RanQ69L
T11 525-529 protein denotes NFAT
T12 542-546 protein denotes CRM1
T13 551-554 protein denotes Ran
T14 573-580 protein denotes RanQ69L
T15 620-624 protein denotes CRM1
T16 712-715 protein denotes p62
T17 728-731 protein denotes Can
T18 732-738 protein denotes Nup214
T19 740-746 protein denotes RanGTP
T20 772-776 protein denotes CRM1
T21 788-800 protein denotes nucleoporins
T22 893-899 protein denotes RanBP1
T23 934-941 protein denotes RanQ69L
T24 1037-1044 protein denotes RanQ69L
T25 1046-1052 protein denotes RanBP1
T26 1064-1067 protein denotes Ran
T27 1115-1121 protein denotes RanBP2
T28 1145-1149 protein denotes CRM1
T29 1206-1212 protein denotes RanGTP
T30 1308-1314 protein denotes RanBP1
T31 1328-1334 protein denotes RanBP2

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-108 Sentence denotes A role for RanBP1 in the release of CRM1 from the nuclear pore complex in a terminal step of nuclear export.
S2 109-346 Sentence denotes We recently developed an assay in which nuclear export of the shuttling transcription factor NFAT (nuclear factor of activated T cells) can be reconstituted in permeabilized cells with the GTPase Ran and the nuclear export receptor CRM1.
S3 347-409 Sentence denotes We have now used this assay to identify another export factor.
S4 410-568 Sentence denotes After preincubation of permeabilized cells with a Ran mutant that cannot hydrolyze GTP (RanQ69L), cytosol supports NFAT export, but CRM1 and Ran alone do not.
S5 569-739 Sentence denotes The RanQ69L preincubation leads to accumulation of CRM1 at the cytoplasmic periphery of the nuclear pore complex (NPC) in association with the p62 complex and Can/Nup214.
S6 740-828 Sentence denotes RanGTP-dependent association of CRM1 with these nucleoporins was reconstituted in vitro.
S7 829-956 Sentence denotes By biochemical fractionation and reconstitution, we showed that RanBP1 restores nuclear export after the RanQ69L preincubation.
S8 957-1045 Sentence denotes It also stimulates nuclear export in cells that have not been preincubated with RanQ69L.
S9 1046-1163 Sentence denotes RanBP1 as well as Ran-binding domains of the cytoplasmic nucleoporin RanBP2 promote the release of CRM1 from the NPC.
S10 1164-1441 Sentence denotes Taken together, our results indicate that RanGTP is important for the targeting of export complexes to the cytoplasmic side of the NPC and that RanBP1 and probably RanBP2 are involved in the dissociation of nuclear export complexes from the NPC in a terminal step of transport.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 11-17 NP denotes RanBP1
C2 36-40 NP denotes CRM1
C3 46-70 NP denotes the nuclear pore complex
C4 93-107 NP denotes nuclear export
C6 131-139 NP denotes an assay
C7 143-148 NP denotes which
C8 313-345 NP denotes the nuclear export receptor CRM1
C5 131-345 NP denotes an assay in which nuclear export of the shuttling transcription factor NFAT (nuclear factor of activated T cells) can be reconstituted in permeabilized cells with the GTPase Ran and the nuclear export receptor CRM1
C9 364-374 NP denotes this assay
C11 458-470 NP denotes a Ran mutant
C12 471-475 NP denotes that
C10 458-506 NP denotes a Ran mutant that cannot hydrolyze GTP (RanQ69L)
C13 569-594 NP denotes The RanQ69L preincubation
C14 620-624 NP denotes CRM1
C15 657-687 NP denotes the nuclear pore complex (NPC)
C16 772-776 NP denotes CRM1
C17 893-899 NP denotes RanBP1
C18 909-923 NP denotes nuclear export
C19 930-955 NP denotes the RanQ69L preincubation
C20 957-959 NP denotes It
C21 994-999 NP denotes cells
C22 1000-1004 NP denotes that
C23 1037-1044 NP denotes RanQ69L
C24 1046-1052 NP denotes RanBP1
C25 1087-1121 NP denotes the cytoplasmic nucleoporin RanBP2
C26 1145-1149 NP denotes CRM1
C27 1155-1162 NP denotes the NPC
C28 1291-1298 NP denotes the NPC
C29 1308-1314 NP denotes RanBP1
C30 1328-1334 NP denotes RanBP2
C31 1401-1408 NP denotes the NPC
R1 C7 C6 coref-relat which,an assay
R2 C8 C2 coref-ident the nuclear export receptor CRM1,CRM1
R3 C9 C5 coref-ident this assay,an assay in which nuclear export of the shuttling transcription factor NFAT (nuclear factor of activated T cells) can be reconstituted in permeabilized cells with the GTPase Ran and the nuclear export receptor CRM1
R4 C12 C11 coref-relat that,a Ran mutant
R5 C14 C8 coref-ident CRM1,the nuclear export receptor CRM1
R6 C15 C3 coref-ident the nuclear pore complex (NPC),the nuclear pore complex
R7 C16 C14 coref-ident CRM1,CRM1
R8 C17 C1 coref-ident RanBP1,RanBP1
R9 C18 C4 coref-ident nuclear export,nuclear export
R10 C19 C13 coref-ident the RanQ69L preincubation,The RanQ69L preincubation
R11 C20 C17 coref-pron It,RanBP1
R12 C22 C21 coref-relat that,cells
R13 C23 C10 coref-ident RanQ69L,a Ran mutant that cannot hydrolyze GTP (RanQ69L)
R14 C24 C17 coref-ident RanBP1,RanBP1
R15 C26 C16 coref-ident CRM1,CRM1
R16 C27 C15 coref-ident the NPC,the nuclear pore complex (NPC)
R17 C28 C27 coref-ident the NPC,the NPC
R18 C29 C24 coref-ident RanBP1,RanBP1
R19 C30 C25 coref-ident RanBP2,the cytoplasmic nucleoporin RanBP2
R20 C31 C28 coref-ident the NPC,the NPC

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 11-17 protein_molecule denotes RanBP1
T2 36-40 protein_molecule denotes CRM1
T3 50-70 protein_complex denotes nuclear pore complex
T4 93-107 other_name denotes nuclear export
T5 149-163 other_name denotes nuclear export
T6 181-206 protein_family_or_group denotes transcription factor NFAT
T7 208-243 protein_family_or_group denotes nuclear factor of activated T cells
T8 298-304 protein_family_or_group denotes GTPase
T9 305-308 protein_molecule denotes Ran
T10 317-331 other_name denotes nuclear export
T11 341-345 protein_molecule denotes CRM1
T12 433-452 cell_line denotes permeabilized cells
T13 460-463 protein_molecule denotes Ran
T14 493-496 polynucleotide denotes GTP
T15 498-505 protein_molecule denotes RanQ69L
T16 525-529 protein_family_or_group denotes NFAT
T17 542-546 protein_molecule denotes CRM1
T18 551-554 protein_molecule denotes Ran
T19 573-580 protein_molecule denotes RanQ69L
T20 620-624 protein_molecule denotes CRM1
T21 632-653 cell_component denotes cytoplasmic periphery
T22 661-681 protein_complex denotes nuclear pore complex
T23 683-686 protein_complex denotes NPC
T24 712-723 protein_complex denotes p62 complex
T25 740-743 protein_molecule denotes Ran
T26 743-746 polynucleotide denotes GTP
T27 772-776 protein_molecule denotes CRM1
T28 788-800 protein_family_or_group denotes nucleoporins
T29 832-857 other_name denotes biochemical fractionation
T30 862-876 other_name denotes reconstitution
T31 893-899 protein_molecule denotes RanBP1
T32 909-923 other_name denotes nuclear export
T33 934-941 protein_molecule denotes RanQ69L
T34 976-990 other_name denotes nuclear export
T35 1037-1044 protein_molecule denotes RanQ69L
T36 1046-1052 protein_molecule denotes RanBP1
T37 1064-1067 protein_molecule denotes Ran
T38 1091-1114 protein_family_or_group denotes cytoplasmic nucleoporin
T39 1115-1121 protein_molecule denotes RanBP2
T40 1145-1149 protein_molecule denotes CRM1
T41 1159-1162 protein_complex denotes NPC
T42 1206-1209 protein_molecule denotes Ran
T43 1209-1212 polynucleotide denotes GTP
T44 1271-1287 cell_component denotes cytoplasmic side
T45 1295-1298 protein_complex denotes NPC
T46 1308-1314 protein_molecule denotes RanBP1
T47 1328-1334 protein_molecule denotes RanBP2
T48 1371-1385 other_name denotes nuclear export
T49 1405-1408 protein_complex denotes NPC
T50 1414-1440 other_name denotes terminal step of transport