PubMed:10202937
Annnotations
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 71-76 | protein | denotes | STAT1 |
| T2 | 415-420 | protein | denotes | STAT1 |
| T3 | 461-492 | protein | denotes | lymphocyte-activating cytokines |
| T4 | 507-518 | protein | denotes | interferons |
| T5 | 763-771 | protein | denotes | cytokine |
| T6 | 794-799 | protein | denotes | STAT1 |
| T7 | 804-809 | protein | denotes | STAT1 |
| T8 | 842-881 | cell_type | denotes | normal resting or activated lymphocytes |
| T9 | 926-939 | protein | denotes | STAT1 protein |
| T10 | 968-973 | protein | denotes | STATs |
| T11 | 988-993 | protein | denotes | STAT1 |
| T12 | 1122-1127 | protein | denotes | STAT1 |
| T13 | 1231-1236 | protein | denotes | STAT1 |
DisGeNET5_gene_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 10202937-3#0#5#gene6772 | 415-420 | gene6772 | denotes | STAT1 |
| 10202937-3#240#256#diseaseC0042769 | 655-671 | diseaseC0042769 | denotes | viral infections |
| 0#5#gene6772240#256#diseaseC0042769 | 10202937-3#0#5#gene6772 | 10202937-3#240#256#diseaseC0042769 | associated_with | STAT1,viral infections |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-87 | Sentence | denotes | Fludarabine-induced immunosuppression is associated with inhibition of STAT1 signaling. |
| S2 | 88-228 | Sentence | denotes | Fludarabine is a nucleoside analog used in the treatment of hematologic malignancies that can induce severe and prolonged immunosuppression. |
| S3 | 229-414 | Sentence | denotes | Although it can be incorporated into the DNA of dividing cells, fludarabine is also a potent inhibitor of cells with a low growth fraction, thus it must have other mechanisms of action. |
| S4 | 415-672 | Sentence | denotes | STAT1, which is activated in response to many lymphocyte-activating cytokines including the interferons, is essential for cell-mediated immunity, as the absence of this protein is associated with prominent defects in the ability to control viral infections. |
| S5 | 673-882 | Sentence | denotes | Here we show that fludarabine, but not the immunosuppressant cyclosporine A, inhibits the cytokine-induced activation of STAT1 and STAT1-dependent gene transcription in normal resting or activated lymphocytes. |
| S6 | 883-974 | Sentence | denotes | Fludarabine caused a specific depletion of STAT1 protein (and mRNA) but not of other STATs. |
| S7 | 975-1064 | Sentence | denotes | This loss of STAT1 was also seen in cells from patients treated with fludarabine in vivo. |
| S8 | 1065-1224 | Sentence | denotes | Brief exposure to fludarabine led to a sustained loss of STAT1, analogous to the prolonged period of immunosuppression induced by exposure to the drug in vivo. |
| S9 | 1225-1330 | Sentence | denotes | Thus, STAT1 may be a useful target in the development of new immunosuppressive and antineoplastic agents. |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 88-99 | NP | denotes | Fludarabine |
| C2 | 148-172 | NP | denotes | hematologic malignancies |
| C3 | 173-177 | NP | denotes | that |
| C4 | 238-240 | NP | denotes | it |
| C5 | 293-304 | NP | denotes | fludarabine |
| C6 | 374-376 | NP | denotes | it |
| C7 | 415-420 | NP | denotes | STAT1 |
| C8 | 422-427 | NP | denotes | which |
| C9 | 579-591 | NP | denotes | this protein |
| C10 | 691-702 | NP | denotes | fludarabine |
| C11 | 794-799 | NP | denotes | STAT1 |
| C12 | 883-894 | NP | denotes | Fludarabine |
| C13 | 988-993 | NP | denotes | STAT1 |
| C14 | 1044-1055 | NP | denotes | fludarabine |
| C15 | 1083-1094 | NP | denotes | fludarabine |
| C16 | 1122-1127 | NP | denotes | STAT1 |
| C17 | 1207-1215 | NP | denotes | the drug |
| C18 | 1231-1236 | NP | denotes | STAT1 |
| R1 | C3 | C2 | coref-relat | that,hematologic malignancies |
| R2 | C4 | C1 | coref-pron | it,Fludarabine |
| R3 | C5 | C1 | coref-ident | fludarabine,Fludarabine |
| R4 | C6 | C5 | coref-pron | it,fludarabine |
| R5 | C8 | C7 | coref-relat | which,STAT1 |
| R6 | C9 | C7 | coref-ident | this protein,STAT1 |
| R7 | C10 | C5 | coref-ident | fludarabine,fludarabine |
| R8 | C11 | C9 | coref-ident | STAT1,this protein |
| R9 | C12 | C10 | coref-ident | Fludarabine,fludarabine |
| R10 | C13 | C11 | coref-ident | STAT1,STAT1 |
| R11 | C14 | C12 | coref-ident | fludarabine,Fludarabine |
| R12 | C15 | C14 | coref-ident | fludarabine,fludarabine |
| R13 | C16 | C13 | coref-ident | STAT1,STAT1 |
| R14 | C17 | C15 | coref-ident | the drug,fludarabine |
| R15 | C18 | C16 | coref-ident | STAT1,STAT1 |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-11 | other_organic_compound | denotes | Fludarabine |
| T2 | 71-76 | protein_molecule | denotes | STAT1 |
| T3 | 88-99 | other_organic_compound | denotes | Fludarabine |
| T4 | 105-122 | other_organic_compound | denotes | nucleoside analog |
| T5 | 148-172 | other_name | denotes | hematologic malignancies |
| T6 | 200-227 | other_name | denotes | prolonged immunosuppression |
| T7 | 293-304 | other_organic_compound | denotes | fludarabine |
| T8 | 348-367 | other_name | denotes | low growth fraction |
| T9 | 415-420 | protein_molecule | denotes | STAT1 |
| T10 | 461-492 | protein_family_or_group | denotes | lymphocyte-activating cytokines |
| T11 | 507-518 | protein_family_or_group | denotes | interferons |
| T12 | 537-559 | other_name | denotes | cell-mediated immunity |
| T13 | 655-671 | other_name | denotes | viral infections |
| T14 | 691-702 | other_organic_compound | denotes | fludarabine |
| T15 | 716-733 | other_organic_compound | denotes | immunosuppressant |
| T16 | 734-748 | other_organic_compound | denotes | cyclosporine A |
| T17 | 763-771 | protein_family_or_group | denotes | cytokine |
| T18 | 794-799 | protein_molecule | denotes | STAT1 |
| T19 | 804-809 | protein_molecule | denotes | STAT1 |
| T20 | 883-894 | other_organic_compound | denotes | Fludarabine |
| T21 | 926-931 | protein_molecule | denotes | STAT1 |
| T22 | 968-973 | protein_family_or_group | denotes | STATs |
| T23 | 988-993 | protein_molecule | denotes | STAT1 |
| T24 | 1022-1030 | multi_cell | denotes | patients |
| T25 | 1044-1055 | other_organic_compound | denotes | fludarabine |
| T26 | 1083-1094 | other_organic_compound | denotes | fludarabine |
| T27 | 1122-1127 | protein_molecule | denotes | STAT1 |
| T28 | 1166-1183 | other_name | denotes | immunosuppression |
| T29 | 1231-1236 | protein_molecule | denotes | STAT1 |
DisGeNET
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T0 | 415-420 | gene:6772 | denotes | STAT1 |
| T1 | 655-671 | disease:C0042769 | denotes | viral infections |
| R1 | T0 | T1 | associated_with | STAT1,viral infections |