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PubMed:10101602 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 27-38 cell_type denotes lymphocytes
T2 287-308 cell_type denotes normal lymphoid cells
T3 454-478 cell_type denotes malignant lymphoid cells
T4 544-566 protein denotes intracellular receptor
T5 584-612 protein denotes steroid receptor superfamily
T6 618-641 protein denotes glucocorticoid receptor
T7 643-645 protein denotes GR
T8 668-670 protein denotes GR
T9 771-792 protein denotes transcription factors
T10 819-830 cell_type denotes lymphocytes
T11 962-964 protein denotes GR
T12 966-975 protein denotes I kappa B
T13 977-982 protein denotes c-jun
T14 1001-1017 protein denotes survival factors
T15 1019-1023 protein denotes AP-1
T16 1025-1030 protein denotes c-Myc
T17 1132-1137 protein denotes Nur77
T18 1142-1144 protein denotes GR

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-95 Sentence denotes [Induction of apoptosis in lymphocytes by glucocorticoids: between physiology and pharmacology]
S2 97-246 Sentence denotes Glucocorticoids are physiological molecules that are also extensively used in clinics as anti-inflammatory, immunosuppressive or anti-tumoral agents.
S3 247-367 Sentence denotes Glucocorticoids can induce apoptosis on normal lymphoid cells and play a key role in the physiology of thymic selection.
S4 368-479 Sentence denotes In clinics these molecules are also used for their potencies in inducing apoptosis of malignant lymphoid cells.
S5 480-647 Sentence denotes Glucocorticoids are mediating their effects after binding to an intracellular receptor belonging to the steroid receptor superfamily: the glucocorticoid receptor (GR).
S6 648-793 Sentence denotes Once activated, the GR, can mediate his effects through direct binding on the DNA or via protein/protein interactions with transcription factors.
S7 794-1032 Sentence denotes Depending on the type of lymphocytes, the mechanism of apoptosis induced by glucocorticoids fall roughly in two categories: induction of "death genes" by the activated GR (I kappa B, c-jun) or repression of survival factors (AP-1, c-Myc).
S8 1033-1145 Sentence denotes In the case of thymic selection the mechanism is more subtle depending on the mutual repression of Nur77 and GR.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 97-112 NP denotes Glucocorticoids
C2 117-140 NP denotes physiological molecules
C3 141-145 NP denotes that
C4 175-182 NP denotes clinics
C5 247-262 NP denotes Glucocorticoids
C6 274-283 NP denotes apoptosis
C7 350-366 NP denotes thymic selection
C8 371-378 NP denotes clinics
C9 379-394 NP denotes these molecules
C10 413-418 NP denotes their
C11 480-495 NP denotes Glucocorticoids
C12 510-515 NP denotes their
C13 580-612 NP denotes the steroid receptor superfamily
C14 614-646 NP denotes the glucocorticoid receptor (GR)
C15 664-670 NP denotes the GR
C16 684-687 NP denotes his
C17 849-858 NP denotes apoptosis
C18 870-885 NP denotes glucocorticoids
C19 902-916 NP denotes two categories
C20 918-1031 NP denotes induction of "death genes" by the activated GR (I kappa B, c-jun) or repression of survival factors (AP-1, c-Myc)
C21 1048-1064 NP denotes thymic selection
C22 1142-1144 NP denotes GR
R1 C3 C2 coref-relat that,physiological molecules
R2 C5 C1 coref-ident Glucocorticoids,Glucocorticoids
R3 C8 C4 coref-ident clinics,clinics
R4 C9 C5 coref-ident these molecules,Glucocorticoids
R5 C10 C9 coref-pron their,these molecules
R6 C11 C9 coref-ident Glucocorticoids,these molecules
R7 C12 C11 coref-pron their,Glucocorticoids
R8 C14 C13 coref-appos the glucocorticoid receptor (GR),the steroid receptor superfamily
R9 C15 C14 coref-ident the GR,the glucocorticoid receptor (GR)
R10 C16 C15 coref-pron his,the GR
R11 C17 C6 coref-ident apoptosis,apoptosis
R12 C18 C11 coref-ident glucocorticoids,Glucocorticoids
R13 C20 C19 coref-appos "induction of ""death genes"" by the activated GR (I kappa B, c-jun) or repression of survival factors (AP-1, c-Myc)",two categories
R14 C21 C7 coref-ident thymic selection,thymic selection
R15 C22 C15 coref-ident GR,the GR

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 27-38 cell_type denotes lymphocytes
T2 42-57 lipid denotes glucocorticoids
T3 97-112 lipid denotes Glucocorticoids
T4 247-262 lipid denotes Glucocorticoids
T5 274-283 other_name denotes apoptosis
T6 287-308 cell_type denotes normal lymphoid cells
T7 350-366 other_name denotes thymic selection
T8 441-450 other_name denotes apoptosis
T9 454-478 cell_type denotes malignant lymphoid cells
T10 480-495 lipid denotes Glucocorticoids
T11 544-566 protein_family_or_group denotes intracellular receptor
T12 584-612 protein_family_or_group denotes steroid receptor superfamily
T13 618-641 protein_family_or_group denotes glucocorticoid receptor
T14 643-645 protein_family_or_group denotes GR
T15 668-670 protein_family_or_group denotes GR
T16 737-765 other_name denotes protein/protein interactions
T17 771-792 protein_family_or_group denotes transcription factors
T18 819-830 cell_type denotes lymphocytes
T19 849-858 other_name denotes apoptosis
T20 870-885 lipid denotes glucocorticoids
T21 962-964 protein_family_or_group denotes GR
T22 966-975 protein_molecule denotes I kappa B
T23 977-982 protein_molecule denotes c-jun
T24 1001-1017 protein_family_or_group denotes survival factors
T25 1019-1023 protein_molecule denotes AP-1
T26 1025-1030 protein_molecule denotes c-Myc
T27 1048-1064 other_name denotes thymic selection
T28 1111-1128 other_name denotes mutual repression
T29 1132-1137 protein_molecule denotes Nur77
T30 1142-1144 protein_family_or_group denotes GR

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 231-238 HP_0002664 denotes tumoral